Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,716,694 G→C 5.1% V627L (GTG→CTG)  PP_4173 → two‑component system sensor histidine kinase/response regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,716,6940GC 5.1% 376.8 / 9.3 118V627L (GTG→CTG) PP_4173two‑component system sensor histidine kinase/response regulator
Reads supporting (aligned to +/- strand):  ref base G (51/61);  new base C (3/3);  total (54/64)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.95e-01

Only 100 of 120 total aligned reads displayed.

CCCGACGCATCCGCCAGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAGTGCACACCTGTACTTCTTTCGCCAGGTGCGCTGTGA  >  NC_002947/4716545‑4716843
                                                                                                                                                     |                                                                                                                                                     
 ccGACGCATCCGCCAGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGt                                                                                                                                                      >  1:2173432/1‑150 (MQ=255)
 ccGACGCATCCGCCAGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGt                                                                                                                                                      >  1:70209/1‑150 (MQ=255)
 ccGACGCATCCGCCAGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGAAGGGCGACAGCGAACGTTGCATGGCCGCCGGGATGGACAAATCTCGGTGGTAGCCGTTGCGCCGCACCGAATTGCAGCAGGt                                                                                                                                                      >  2:194934/1‑150 (MQ=255)
  cGACGCATCCGCCAGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGtg                                                                                                                                                     <  2:2173432/150‑1 (MQ=255)
   gACGCATCCGCCAGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGtgc                                                                                                                                                    >  2:1500209/1‑150 (MQ=255)
       cATCCGCCAGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCa                                                                                                                                                >  1:1371041/1‑150 (MQ=255)
        aTCCGCCAGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAg                                                                                                                                               >  1:459864/1‑150 (MQ=255)
         tCCGCCAGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAgc                                                                                                                                              <  2:1512878/150‑1 (MQ=255)
         tCCGCCAGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAgc                                                                                                                                              <  1:1962917/150‑1 (MQ=255)
           cGCCAGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACTCTTGCGCCGCACCGAATTGCAGCACCTGCTGCaattc                                                                                                                                            <  2:1814833/150‑5 (MQ=255)
            gCCAGTTGCCCAACGGCGCCGGGCTACCGATCATAGAAATGAAGGTCAACCTGTCGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCt                                                                                                                                           >  1:1253177/1‑150 (MQ=255)
             ccAGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGTACCGAATTGCAGCAGGTGCTGCAGCGCTg                                                                                                                                          >  1:359600/1‑150 (MQ=255)
              cAGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACTCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTgg                                                                                                                                         <  1:1122755/150‑1 (MQ=255)
               aGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGTTATGGACGATTACCTGAGCAAACCCTTGCGCCGCAGCGAATTGCCGCAGGTGCTGCAgcggggtt                                                                                                                                        >  2:1122755/1‑145 (MQ=255)
               aGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGt                                                                                                                                        <  2:1253177/150‑1 (MQ=255)
                gTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCACCTGCTGCaattcg                                                                                                                                           >  1:105003/1‑141 (MQ=255)
                gTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCACCTGCTGCaattcg                                                                                                                                           <  2:105003/146‑6 (MQ=255)
                    cccAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTAccc                                                                                                                                   <  2:2373700/150‑1 (MQ=255)
                     ccAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTg                                                                                                                                          <  1:1680033/142‑1 (MQ=255)
                     ccAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCg                                                                                                                                  >  2:1085888/1‑150 (MQ=255)
                     ccAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCg                                                                                                                                  >  2:774757/1‑150 (MQ=255)
                     ccAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCg                                                                                                                                  >  1:571529/1‑150 (MQ=255)
                       aaCGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGt                                                                                                                                >  1:1928371/1‑150 (MQ=255)
                         cGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGAAACGCTGGTTACCCGGTCa                                                                                                                              <  1:83342/150‑1 (MQ=255)
                           gcgcCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGa                                                                                                                            <  2:2186310/150‑1 (MQ=255)
                           gcgcCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGa                                                                                                                            <  1:1566995/150‑1 (MQ=255)
                                gggCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAAcc                                                                                                                       >  1:2105974/1‑150 (MQ=255)
                                gggCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAAcc                                                                                                                       >  1:1052231/1‑150 (MQ=255)
                                  gCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACcgc                                                                                                                     <  1:359904/150‑1 (MQ=255)
                                      ccGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTAc                                                                                                                                     >  1:1950308/1‑130 (MQ=255)
                                      ccGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTAc                                                                                                                                     <  2:1950308/130‑1 (MQ=255)
                                       cGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCATACCCTTGCGCCGCACCGAATTGCAGCAGGTGACGCCGCGCTGGATACCTGGTAAGACACCGGCGACtt                                                                                                                >  2:748737/1‑149 (MQ=255)
                                           catcGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGa                                                                                                            <  2:29367/150‑1 (MQ=255)
                                             tcGCCGTGACCGCCAACGCGTTGCAGGGCGACAGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCCGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATa                                                                                                          >  2:890705/1‑150 (MQ=255)
                                             tcGCCCTGACCGCCAACGCGTGGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGTAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATa                                                                                                          >  2:1908419/1‑150 (MQ=255)
                                              cGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATaa                                                                                                         >  2:1200169/1‑150 (MQ=255)
                                               gCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATaaa                                                                                                        <  2:70209/150‑1 (MQ=255)
                                                cccTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAAt                                                                                                       >  2:441016/1‑150 (MQ=255)
                                                cccTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAAt                                                                                                       <  2:1311835/150‑1 (MQ=255)
                                                cccTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAAt                                                                                                       <  1:1726789/150‑1 (MQ=255)
                                                  cTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGc                                                                                                     <  2:459864/150‑1 (MQ=255)
                                                      ccGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTaaa                                                                                                 <  2:359600/150‑1 (MQ=255)
                                                       cGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAg                                                                                                >  2:1501102/1‑150 (MQ=255)
                                                       cGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAg                                                                                                >  1:249812/1‑150 (MQ=255)
                                                         ccAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTAccc                                                                                                                                   <  1:911329/113‑1 (MQ=255)
                                                            aCGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCgg                                                                                           <  1:774757/150‑1 (MQ=255)
                                                               cgTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAg                                                                                        >  1:1249370/1‑150 (MQ=255)
                                                                    cAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAATTGCGGCAGTCTTa                                                                                   <  2:2300723/150‑1 (MQ=255)
                                                                      gggCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTaaa                                                                                 <  2:1900013/150‑1 (MQ=255)
                                                                        gCGACCGCGAACGTTGCAGGGGCGCCGGTATGGATGATTACCTGAGCAAACCCTTGCGGCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAaca                                                                               <  2:1052231/150‑1 (MQ=255)
                                                                          gACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTg                                                                                                                                          <  2:2041102/89‑1 (MQ=255)
                                                                          gACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACt                                                                             <  1:1430419/150‑1 (MQ=255)
                                                                           aCCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTg                                                                            <  2:1531243/150‑1 (MQ=255)
                                                                             cgcgAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGa                                                                          <  1:1085888/150‑1 (MQ=255)
                                                                             cgcgAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGa                                                                          <  1:1476484/150‑1 (MQ=255)
                                                                             cgcgAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGa                                                                          <  1:1200169/150‑1 (MQ=255)
                                                                             cgcgAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGa                                                                          >  2:91024/1‑150 (MQ=255)
                                                                               cgAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACa                                                                        <  2:571529/150‑1 (MQ=255)
                                                                                gAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAg                                                                       <  1:1501102/150‑1 (MQ=255)
                                                                                gAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAg                                                                       >  1:700373/1‑150 (MQ=255)
                                                                                 aaCGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAgg                                                                      <  1:890705/150‑1 (MQ=255)
                                                                                  aCGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGa                                                                     <  1:91024/150‑1 (MQ=255)
                                                                                  aCGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGAGATGGTTACCCGGAAAAACATCCGCGACTTGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGa                                                                     <  1:1500209/150‑1 (MQ=255)
                                                                                        cATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCa                                                               >  1:2207322/1‑150 (MQ=255)
                                                                                        aaTGGCCGCCGGTATGGACGATTACCTGAGCAAACACTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGAAAACCGCGACTGGCGATAAATGCTAAAGTGAGGCAGTCTTAAACACTGGACAGGCCCTTCa                                                               >  2:1101000/2‑150 (MQ=255)
                                                                                         aTGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACa                                                                        >  2:896605/1‑140 (MQ=255)
                                                                                         aTGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACa                                                                        <  1:896605/140‑1 (MQ=255)
                                                                                           ggCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCg                                                            <  1:441016/150‑1 (MQ=255)
                                                                                             ccgccgGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGa                                                          <  2:2105974/150‑1 (MQ=255)
                                                                                                 cgGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGAAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTg                                                      >  1:61824/1‑150 (MQ=255)
                                                                                                      tGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAAt                                                 >  2:53053/1‑150 (MQ=255)
                                                                                                       ggACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATa                                                <  2:1316657/150‑1 (MQ=255)
                                                                                                        gACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAg                                               >  1:587318/1‑150 (MQ=255)
                                                                                                        gACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAg                                               >  2:626090/1‑150 (MQ=255)
                                                                                                        gACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAg                                               >  1:587422/1‑150 (MQ=255)
                                                                                                         aCGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGa                                                                          <  2:1918643/122‑1 (MQ=255)
                                                                                                         aCGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGa                                                                          >  1:1918643/1‑122 (MQ=255)
                                                                                                         aCGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGa                                              <  2:1928371/150‑1 (MQ=255)
                                                                                                         aCGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGa                                              <  2:648933/150‑1 (MQ=255)
                                                                                                           gATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACg                                            >  1:1866804/1‑150 (MQ=255)
                                                                                                            aTTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGt                                           <  2:1249370/150‑1 (MQ=255)
                                                                                                              tACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGttt                                         <  1:413792/150‑1 (MQ=255)
                                                                                                                 cTGAGCACACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAg                                      >  1:1687627/1‑150 (MQ=255)
                                                                                                                 cTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCa                                                                                         <  1:730996/99‑1 (MQ=255)
                                                                                                                 cTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGAc                                                         <  2:544195/131‑1 (MQ=255)
                                                                                                                  tGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAGt                                     >  1:1695813/1‑150 (MQ=255)
                                                                                                                             ttGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCTACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAGTGCACACCTGTa                          <  1:970592/150‑1 (MQ=255)
                                                                                                                                 gccgtACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAGTGCACACCTGTActtc                      <  2:1577085/150‑1 (MQ=255)
                                                                                                                                 gccgcACCGCGGTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAGTGCACACCTGTActtc                      <  2:61824/150‑1 (MQ=255)
                                                                                                                                 gccgcACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAGTGCAAACCTGTActtc                      >  1:1573417/1‑150 (MQ=255)
                                                                                                                                  ccgcACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAGTGCACACCTGTActtct                     <  1:626090/150‑1 (MQ=255)
                                                                                                                                   cgcACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAGTGCACACCTGTActtctt                    <  2:2207322/150‑1 (MQ=255)
                                                                                                                                     cACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAGTGCACACCTGTACTTCTTTc                  <  2:2370113/150‑1 (MQ=255)
                                                                                                                                      ccagcgctGCAGCACCTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAGTGCACACCTGTACTTCTTTCg                 >  2:183185/8‑150 (MQ=255)
                                                                                                                                        cGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAGTGCACACCt                             <  2:245387/136‑1 (MQ=255)
                                                                                                                                        cGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAGTGCACACCt                             >  1:245387/1‑136 (MQ=255)
                                                                                                                                            ttGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAGTGCACACCTGTACTTCTTTCGCCAGGt           <  1:1030345/150‑1 (MQ=255)
                                                                                                                                                 gcagGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGACTTATATACTGGACAGGACCTTCATCGGACCTGAAAATACACATTTCAGTGCACACCTTTACTTCTTTCGCCAGGTGCGCt      <  1:194934/150‑1 (MQ=255)
                                                                                                                                                   agGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAGTGCACACCTGTACTTCTTTCGCCAGGTGCGCtgt    <  2:1695813/150‑1 (MQ=255)
                                                                                                                                                     gTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGCCACGACAATAGACGTTTCCGTGCACACCTGTACTTCTTTCGCCAGGTGCGCTGTGa  <  2:1899143/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CCCGACGCATCCGCCAGTTGCCCAACGGCGCCGGGCTACCGATCATCGCCCTGACCGCCAACGCGTTGCAGGGCGACCGCGAACGTTGCATGGCCGCCGGTATGGACGATTACCTGAGCAAACCCTTGCGCCGCACCGAATTGCAGCAGGTGCTGCAGCGCTGGTTACCCGGTCAGACAACCGCGACTGGCGATAAATGCTAAAGTGCGGCAGTCTTAAACACTGGACAGGACCTTCATCGGACCTGAAAATAGACGTTTCAGTGCACACCTGTACTTCTTTCGCCAGGTGCGCTGTGA  >  NC_002947/4716545‑4716843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: