| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,780,166 | A→G | 10.7% | V2398A (GTG→GCG) ‡ | pvdJ ← | non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,780,166 | 0 | A | G | 10.7% | 272.8 / 17.2 | 101 | V2398A (GTG→GCG) ‡ | pvdJ | non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base A (45/45); new base G (5/6); total (50/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.35e-01 | |||||||||||
Only 100 of 105 total aligned reads displayed.
CACCTGCGCATCCACCACCACGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGCCGGCCACATGCAACTCGCCGGTGGCC > NC_002947/4780018‑4780312 | cACCTCCGCATCCACCACCACGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCacac < 1:1110423/150‑1 (MQ=255) aCCTGCGCATCCACCACCACGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACg > 1:499900/1‑150 (MQ=255) cTGCGCATCCACCACCACGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTg > 1:711952/1‑150 (MQ=255) tGCGCATCCACCACCACGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTgc < 1:1879010/150‑1 (MQ=255) tGCGCATCCACCACCACGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTgc < 2:1392864/150‑1 (MQ=255) cATCCACCACCACGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCa > 1:1679630/1‑150 (MQ=255) cATCCACCACCACGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCa < 2:443063/150‑1 (MQ=255) aTCCACCACCACGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACGTGTGCGccga > 1:1059605/1‑148 (MQ=255) aTCCACCACCACGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACGTGTGCGccga < 2:1059605/150‑3 (MQ=255) aTCCACCACCACGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAg > 1:913346/1‑150 (MQ=255) tCCACCACCACGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACGTGTGCGccgat < 1:1989974/150‑4 (MQ=255) ccaccaccaCGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGt > 2:642606/1‑150 (MQ=255) caccaccacGGCGCTGTCCACCCGTTCATGCGCCCGCAGGCGCGATTCAATTTTGCGCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACGTGTGCGccgatgg < 2:397158/150‑6 (MQ=255) ccaccacGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGc < 2:499900/150‑1 (MQ=255) caccacGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGcc > 2:505471/1‑142 (MQ=255) caccacGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGcc < 1:505471/142‑1 (MQ=255) cacGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACt > 1:1311229/1‑150 (MQ=255) cacGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTACGCCAGGTCGCCACt > 2:2244513/1‑150 (MQ=255) cgcTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGt < 1:1300015/150‑1 (MQ=255) cTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTAc < 2:1957306/150‑1 (MQ=255) tgtgCACCCCTTCCTCGGCCAGCAGGCGCGATTCGACTTACCCCAGCTCTCTGCGGTCGCCGCGTATCTTCACCTGGAAGTCGGCGCGCCCCACATCCTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACa < 1:262045/150‑1 (MQ=255) acacCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGgcgc < 1:2241425/150‑1 (MQ=255) acacCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTAGGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGgcgc > 2:2146527/1‑150 (MQ=255) acCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCgg < 1:2058282/139‑1 (MQ=255) acCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCgg > 2:2058282/1‑139 (MQ=255) acCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTc > 1:1603225/1‑150 (MQ=255) ttCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACGTGTGCGccgctag < 1:84959/126‑6 (MQ=38) ttCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACGTGTGCGccgatgg > 2:84959/1‑121 (MQ=38) ttCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCAcc < 1:1434173/150‑1 (MQ=255) cATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCg > 1:1248291/1‑150 (MQ=255) gggCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGggc > 2:1934014/1‑150 (MQ=255) ggCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGggcg > 1:1088981/1‑150 (MQ=255) cagcagGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTTCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCt < 2:855077/150‑1 (MQ=255) cagcagGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCt < 1:642606/150‑1 (MQ=255) cagcagGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCt > 1:1584473/1‑150 (MQ=255) gcagGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTCCACCTCGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCACCCGGCTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTgg < 1:2244513/150‑1 (MQ=255) cagGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGc < 2:1505746/150‑1 (MQ=255) gcgcGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGaa < 2:1603225/150‑1 (MQ=255) cgcgATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAAc < 2:1311229/150‑1 (MQ=255) gattcgattTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGa > 2:161153/1‑150 (MQ=255) ttcgattTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATc > 1:471811/1‑150 (MQ=255) gattTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCggg < 2:2345468/150‑1 (MQ=255) gattTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCggg < 1:686219/150‑1 (MQ=255) attTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCgg < 1:1415795/148‑1 (MQ=255) attTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCgg > 2:1415795/1‑148 (MQ=255) tttCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGc < 2:2093675/108‑1 (MQ=255) tttCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGc > 1:2093675/1‑108 (MQ=255) tttCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGa > 2:2280582/1‑150 (MQ=255) ttCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGAc > 2:629148/1‑150 (MQ=255) cccAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAAc < 1:1525854/135‑1 (MQ=255) ccAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGc > 1:320137/1‑150 (MQ=255) ttCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCaa < 2:459300/150‑1 (MQ=255) tATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTgc > 2:658997/1‑79 (MQ=255) tATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTgc < 1:658997/79‑1 (MQ=255) gCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACCAAGTTCAATGCCGt < 2:1679630/150‑1 (MQ=255) tCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGAt > 1:2133090/1‑111 (MQ=255) tCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGAt < 2:2133090/111‑1 (MQ=255) cACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAg < 2:33462/150‑1 (MQ=255) cACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAg < 1:161153/150‑1 (MQ=255) aCCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCGATCGGCGCACGTGTGCGccgat > 1:2293412/1‑60 (MQ=37) aCCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACGTGTGCGccgat < 2:2293412/63‑4 (MQ=38) ccTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCgg < 1:1599012/111‑1 (MQ=255) ccTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCgg > 2:1599012/1‑111 (MQ=255) tGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTaa > 2:2061525/1‑150 (MQ=255) aaGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACcg > 1:305230/1‑150 (MQ=255) gTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACcgcg > 1:1588075/1‑150 (MQ=255) cGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGcc < 2:171935/150‑1 (MQ=255) ggCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGccc < 2:320137/150‑1 (MQ=255) cgcCCCACATACGCCAGGGTCTGCCCATCGGCGCACATGTGCGCAAGGTCGCCACTGCGGTACAGGCGATCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGAGATCgcgcgcctcg < 2:600541/150‑7 (MQ=255) ccACATACTCCAGGGTCTGCCCATCGGCGCACACATGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTa > 1:651760/1‑150 (MQ=255) cacaTACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTAc < 2:1248291/150‑1 (MQ=255) acaTACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTgta < 2:1346476/80‑3 (MQ=255) acaTACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTgta > 1:1346476/1‑78 (MQ=255) cTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGCCGGc < 2:175361/150‑1 (MQ=255) cTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGCCGGc < 1:2264235/150‑1 (MQ=255) cTCCAGGGTCTGCCCATCGACGCACACGTGCGCCAGGTCGCCACTGCGCTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCCGGGACAAAGTTCAATGCCGTGCGCAGCACATACCCGAAGTAACCGCTCCCGACCCCGACGCCgac > 2:470835/1‑148 (MQ=255) tCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTTGATGCCGTGCGGATCGGCTCCCCAAGGTAACCGCGCCCGACACCTACGCCGGcc > 2:676230/1‑150 (MQ=255) ccAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCggg > 1:1304583/1‑85 (MQ=255) ccAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCggg < 2:1304583/85‑1 (MQ=255) cAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAAGCGCTCACCCGGGCGGCTGGCGAACGGCTCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGCCGGCcac > 1:1074500/1‑150 (MQ=255) tCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTGCGCCGGCCACATGCa > 2:1683650/1‑150 (MQ=255) cccATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTgc < 1:1089759/95‑1 (MQ=255) cccATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTgc > 2:1089759/1‑95 (MQ=255) cccATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGCCGGCCACATGc > 2:381134/1‑145 (MQ=255) cccATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGCCGGCCACATGc < 1:381134/145‑1 (MQ=255) cATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGCCGGCCACATGCAACTCGc < 1:556758/150‑1 (MQ=255) cATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGCCGGCCACATGCAACTCGc < 1:2061525/150‑1 (MQ=255) cATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGAAAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGCCGGCCACATGCAACTCGc > 2:1580941/1‑150 (MQ=255) aTCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCg < 1:767682/89‑1 (MQ=255) aTCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCg > 2:767682/1‑89 (MQ=255) aTCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGcc < 1:358246/132‑1 (MQ=255) aTCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGcc > 2:358246/1‑132 (MQ=255) aTCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGCCGGCCACATGCAACTCGcc > 2:159300/1‑150 (MQ=255) tCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGAAAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTCCGCCCGCCACATGCAACTCGcag > 2:111123/1‑148 (MQ=255) ctggCGCACGTGTGCGCCAGGTCGCCACTGCGGTACACGCGCTCACCCGGGCGGCTTGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACTCCGGCCACATGCAACTCGCCg > 1:369353/3‑150 (MQ=255) tggCGCACGTGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGCCGGCCACATGCAACTCGCCgg > 1:797365/2‑150 (MQ=255) gcgcACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCATGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGCCGGCCACATGCAACTCGCCGGTg < 2:711952/150‑1 (MQ=255) cacaCGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAAGGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGCCGGCCACATGCAACTCGCCGGTGGcc < 2:657646/150‑1 (MQ=255) acGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGac > 2:1115785/1‑113 (MQ=255) acGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGac < 1:1115785/113‑1 (MQ=255) | CACCTGCGCATCCACCACCACGGCGCTGTGCACACCTTCATGGGCCAGCAGGCGCGATTCGATTTCGCCCAGTTCTATGCGGTAGCCGCGGATCTTCACCTGGAAGTCGGCGCGCCCCACATACTCCAGGGTCTGCCCATCGGCGCACACGTGCGCCAGGTCGCCACTGCGGTACAGGCGCTCACCCGGGCGGCTGGCGAACGGATCGGGGACAAAGCTCAATGCCGTGCGCACCGGATCCCCAAGGTAACCGCGCCCGACACCTACGCCGGCCACATGCAACTCGCCGGTGGCC > NC_002947/4780018‑4780312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |