| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,803,227 | C→G | 5.2% | V44V (GTG→GTC) | PP_4231 ← | xanthine dehydrogenase accessory factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,803,227 | 0 | C | G | 5.2% | 368.7 / 8.4 | 118 | V44V (GTG→GTC) | PP_4231 | xanthine dehydrogenase accessory factor |
| Reads supporting (aligned to +/- strand): ref base C (49/60); new base G (3/3); total (54/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.58e-01 | |||||||||||
Only 100 of 118 total aligned reads displayed.
GCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCGAGATGCTGCACGCTTTACTCCGCCTTCA > NC_002947/4803083‑4803375 | gcgaacgcgcgaacgcGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGc > 1:436130/1‑150 (MQ=255)gcgaacgcgcgaacgcGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGc > 2:588478/1‑150 (MQ=255) cgcgcgaacgcgGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGGTGAACGCcagcg < 2:2341480/150‑2 (MQ=255) cgcgcgaacgcgGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGGTGAACGCcagcg < 2:287513/150‑2 (MQ=255) cgcgaacgcgGGTCTCTGCCTTGCGCAGAACGCACTATGTCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTACAGAAAGTCGTCTGCTACTCAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCagcagc < 1:1034156/150‑1 (MQ=255) cgcgaacgcgGGTCGCTGCCGGCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTGGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCagcagc < 2:1514791/150‑1 (MQ=255) gcgaacgcgGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCg > 1:158704/1‑150 (MQ=255) cgaacgcgGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCTGCTGGCGGTGAACGCcagcggcca < 2:1808635/150‑6 (MQ=255) gcgGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCg < 1:1089622/150‑1 (MQ=255) gCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCAcg > 1:1904962/1‑150 (MQ=255) cTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCAc > 2:1685308/1‑125 (MQ=255) cTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCAc < 1:1685308/125‑1 (MQ=255) cTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCAcgc < 1:2149183/150‑1 (MQ=255) tGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCAcgcg > 1:1762281/1‑150 (MQ=255) gCCGTCGCCATAACGCACGATGGCAACCGGCTCCTGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACgcg‑g < 1:67935/150‑1 (MQ=255) ccGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACgcg‑gc < 2:608146/150‑1 (MQ=255) cATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGC‑CGCGTGCGCCgggt < 1:1984729/150‑4 (MQ=255) aTAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGCAGCAACCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGcc < 1:1957607/150‑1 (MQ=255) aTAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGcc < 2:1762281/150‑1 (MQ=255) tAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCg > 2:1145551/1‑150 (MQ=255) gCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAgg > 2:1630483/1‑150 (MQ=255) gCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAgg > 2:455754/1‑150 (MQ=255) aaCGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTGCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGt > 2:1843099/2‑150 (MQ=255) gATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTgg < 1:632299/149‑1 (MQ=255) gATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGc < 2:2250695/150‑1 (MQ=255) aTGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCg > 2:838229/1‑150 (MQ=255) tGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGa < 1:1630483/150‑1 (MQ=255) tGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTCAACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGCCGa > 2:301408/1‑150 (MQ=255) cGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACTGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACtgt < 2:1644761/150‑1 (MQ=255) cGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACtgt < 1:2296166/150‑1 (MQ=255) cGGCGCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCTGCTGGAGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACtgt < 2:819383/150‑1 (MQ=255) ggCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACtgtg < 1:2046217/150‑1 (MQ=255) cctcggggAATTCCCGGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGc > 1:563378/6‑150 (MQ=255) catcggggAATTCCCGGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGc > 2:1799903/6‑150 (MQ=255) cGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCCGCAGCGAACGCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACaa > 1:1143835/1‑150 (MQ=255) ggAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACAAAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAAcc < 2:583331/150‑1 (MQ=255) aTTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATa > 2:370977/1‑150 (MQ=255) ttCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGa > 1:987178/1‑131 (MQ=255) ttCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATAc > 1:1620234/1‑150 (MQ=255) tcccccGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCCCCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATAc < 2:1675780/148‑1 (MQ=255) cccGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCg > 1:1081476/1‑150 (MQ=255) ccGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGc < 2:1595445/150‑1 (MQ=255) ccGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGc > 1:1595445/1‑150 (MQ=255) gCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCg < 2:158704/150‑1 (MQ=255) cACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAg > 1:1059470/1‑120 (MQ=255) cACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAg < 2:1059470/120‑1 (MQ=255) aCGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTg > 1:1304090/1‑150 (MQ=255) cgTTCGAGAAAGTCGTCTACGAACCATCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAg < 2:2359690/150‑1 (MQ=255) ttCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGa > 2:353637/1‑150 (MQ=255) gagaAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCa < 2:563378/150‑1 (MQ=255) gagaAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCa > 2:748536/1‑150 (MQ=255) gagaAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGC‑CGCGTGCGCCgg > 2:2005397/1‑95 (MQ=255) agaAAGTCGTCTTCGACACAGTCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCAc > 2:2375735/1‑150 (MQ=255) agaAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCCATAACCGCCAGCAGCTTACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCAc > 1:2100293/1‑150 (MQ=255) gaAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACt < 1:748536/150‑1 (MQ=255) gaAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACt < 2:1167385/150‑1 (MQ=255) aaGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTACACAACCATACCCGCTCGCCGTTGCAGGACCACTGc < 1:444493/150‑1 (MQ=255) tcgtcTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCaaa < 1:2262230/150‑1 (MQ=255) cgtcTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAg < 1:534589/150‑1 (MQ=255) tcTTCGACACAGCCACCGGACAGCGAGCCCAGCCGCTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGcc > 1:1629756/1‑150 (MQ=255) tcTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGcc > 1:2310154/1‑150 (MQ=255) tcTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGcc > 1:27684/1‑150 (MQ=255) tcTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGGTGAACGCCagcggcca > 1:296756/1‑63 (MQ=25) ttCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGc > 2:1505345/1‑96 (MQ=255) ttCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTg < 2:2310154/150‑1 (MQ=255) tCGACACAGCCACCGGACCGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGa < 1:701300/150‑1 (MQ=255) tCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGa < 2:1838725/150‑1 (MQ=255) cGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGAc < 2:2087318/150‑1 (MQ=255) cacaGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCCCTGTGCACAACCATACCCGCTCGCCGTTGCAGCACCACTGCAAAGCCTGACGGa > 2:973576/1‑150 (MQ=255) acaGGCCCCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCCCGCG‑GCGCTGAGCCGTAGGTGGCGAGCCCTGTGCACAACCATACCCGCGCGCCGTGGCAGGACCACTGCAAAGCCTGACGGAt < 1:973576/150‑1 (MQ=255) gCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCAc < 2:1411201/150‑1 (MQ=255) gCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCAACAGCCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGCCGGATCAc < 1:1231480/150‑1 (MQ=255) ccACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCATCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAg > 1:2293500/1‑123 (MQ=255) ccACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAg < 2:2293500/123‑1 (MQ=255) cACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCt > 1:1723381/1‑150 (MQ=255) aCCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGc > 1:417102/1‑74 (MQ=255) aCCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGc < 2:417102/74‑1 (MQ=255) aCCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTg > 2:671204/1‑150 (MQ=255) aCAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGAt < 1:2386176/150‑1 (MQ=255) aGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCg > 1:1128220/1‑150 (MQ=255) gCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCga < 1:455754/150‑1 (MQ=255) gCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGaa < 2:2317539/40‑1 (MQ=255) cccAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCGAGAtgc < 1:1464198/150‑1 (MQ=255) ccAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGGTCACCTGTAGATCGAGAtg > 2:236277/1‑148 (MQ=255) ccAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCGAGAtg < 1:236277/148‑1 (MQ=255) cgCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCGAGAtgctgc < 1:2215330/149‑1 (MQ=255) aGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCGAGAtgctgc > 1:1448469/1‑150 (MQ=255) aCTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGAc > 1:598331/1‑120 (MQ=255) aCTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGAc < 2:598331/120‑1 (MQ=255) ctgCTGGCGGTGAACGCCAGCGGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCGAGATGCTGCACGCTTTAc > 2:2034052/3‑150 (MQ=255) tgCTGGCGGTGAACGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATc > 1:1186521/2‑130 (MQ=255) cGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATAc < 1:2174996/79‑1 (MQ=255) cGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATAc > 2:2174996/1‑79 (MQ=255) gCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCGAGATGCTGCACGCTTTACTc > 1:2217883/1‑150 (MQ=255) gCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCGAGATGCTGCACGCTTTACTCCGcc < 1:2398244/150‑1 (MQ=255) gCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCGAGATGCTGCACGCTTTACTCCGcc < 2:1662419/150‑1 (MQ=255) gTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑TCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCGAGATGCTGCACGCTTTACTCCGCCtt < 1:2182511/150‑1 (MQ=255) gTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCGAGATGCTGCACGCTTTACTCCGCCtt > 2:1474222/1‑150 (MQ=255) ttCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCGAGATGCTGCACGCTTTACTCCGCCTTc < 1:1255243/150‑1 (MQ=255) tCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCGAGATGCTGCACGCTTTACTCCGCCTTCa < 1:671204/150‑1 (MQ=255) | GCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACCGCCAGCAGCGAACCCGGCGCACGCG‑GCGCCGAGCCGTAGGTGGCGAGCACTGTGCACAACCATACCCGCTCGCCGTTGCAGGACCACTGCAAAGCCTGACGGATCACCTGTAGATCGAGATGCTGCACGCTTTACTCCGCCTTCA > NC_002947/4803083‑4803375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |