| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,812,228 | C→T | 7.2% | intergenic (+103/‑290) | PP_4238 → / → PP_5665 | hypothetical protein/McbA family microcin B17‑like processing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,812,228 | 0 | C | T | 7.2% | 240.9 / 7.1 | 83 | intergenic (+103/‑290) | PP_4238/PP_5665 | hypothetical protein/McbA family microcin B17‑like processing protein |
| Reads supporting (aligned to +/- strand): ref base C (37/40); new base T (3/3); total (40/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.59e-01 | |||||||||||
GAGACACATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTATCA > NC_002947/4812079‑4812376 | gagaCACATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTc > 2:1755015/1‑150 (MQ=255)gagaCACATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTc > 1:1394252/1‑150 (MQ=255) gaCACATTAGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCaa > 2:1420729/1‑150 (MQ=255) acacATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTACCCCTGCAACTCAAAATATCTAGAAACAATTCTTCGTAGCATGCTGATGTCaaa < 2:1233674/150‑1 (MQ=255) ttGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTACATCTTACGCCATCAAACCCACGTAGCGGGCCACT‑TAACCCCACGCATGTGTAACCCTGCAACGCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCa < 2:1477884/150‑1 (MQ=255) ttGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCa < 2:1410879/150‑1 (MQ=255) gTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCa > 2:1442138/1‑147 (MQ=255) gTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCa < 1:1442138/147‑1 (MQ=255) gTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCa < 2:2008973/150‑1 (MQ=255) gATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAACTATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCa > 2:1617523/1‑148 (MQ=255) gATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCa < 1:1617523/148‑1 (MQ=255) tGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAGCATGCTc < 1:1512252/150‑1 (MQ=255) aCGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTcgcg < 2:2182616/150‑1 (MQ=255) gCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAACCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTGACCGACCGACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCGGATGTCAAACATCAGCATGCTCGCGcc > 1:1022441/1‑150 (MQ=255) aGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGcccc < 2:1839931/150‑1 (MQ=255) ggCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCt < 1:2241156/150‑1 (MQ=255) gCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCtt < 1:683513/150‑1 (MQ=255) cGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTc > 2:1205002/1‑123 (MQ=255) cGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTc < 1:1205002/123‑1 (MQ=255) cGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCttat > 2:370357/1‑150 (MQ=255) cTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGc < 2:484715/129‑1 (MQ=255) cTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGc > 1:484715/1‑129 (MQ=255) cTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTaaa < 2:1394252/150‑1 (MQ=255) ttCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAAc < 1:1755015/150‑1 (MQ=255) gCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTc > 2:99409/1‑150 (MQ=255) tAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCCGCATGCTCGCGCCCGTAAATAAAAGATCACACcgcg > 2:1719953/1‑150 (MQ=255) cccGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAAcg < 2:286686/150‑2 (MQ=255) cccGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACa > 2:409347/1‑150 (MQ=255) cGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACaaa < 2:1853967/150‑1 (MQ=255) aatcTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGGGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACt > 2:1336346/1‑150 (MQ=255) atcTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGACCACTc < 2:953327/150‑1 (MQ=255) tgtcACT‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTca > 2:648084/3‑150 (MQ=255) tctcACG‑ACCCGGCAAATCTATCCCCACGCATGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTAATGTCAAACATCAGCATGATCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAacaatga > 1:443681/1‑146 (MQ=255) tctcACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGc < 2:688449/102‑1 (MQ=255) tctcACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGc > 1:688449/1‑102 (MQ=255) g‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACACTGCAACACAAAATCTCTAGAAACAATTCTTCGGAGCATGCTGATATCAAACCTCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCt > 2:275565/1‑150 (MQ=255) cccGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTaaaa > 2:1045389/1‑112 (MQ=255) cccGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTaaaa < 1:1045389/112‑1 (MQ=255) gCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCACAACAAAGAACACTCACACGCTcaccac > 1:568401/1‑150 (MQ=255) tCTATCACCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGc > 2:150301/1‑150 (MQ=255) cTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCt > 1:2086512/1‑150 (MQ=255) tATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCtt < 1:1719953/150‑1 (MQ=255) tCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGGGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTc < 1:1336346/150‑1 (MQ=255) tCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTcac < 1:1782568/138‑1 (MQ=255) tCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTcac > 2:1782568/1‑138 (MQ=255) tCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTc < 1:370357/150‑1 (MQ=255) cccACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCgcgc < 1:2126557/85‑1 (MQ=255) cccACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCgcgc > 2:2126557/1‑85 (MQ=255) cccACGCAGCAATCACCCTGCAACGCAAAATATCTAGAAACAATTCTTCGTAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGc > 2:101712/1‑150 (MQ=255) ccACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAGCATg < 1:1032295/77‑1 (MQ=37) ccACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAGCATg > 2:1032295/1‑77 (MQ=37) ccACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCa > 1:795348/1‑150 (MQ=255) ccACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCa > 1:2182415/1‑150 (MQ=255) aCGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGccc < 2:155830/84‑1 (MQ=255) aCGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGccc > 1:155830/1‑84 (MQ=255) tCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAacac < 2:727366/114‑1 (MQ=255) tCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAacac > 1:727366/1‑114 (MQ=255) aCCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAGCATGCTc > 2:137586/1‑67 (MQ=25) aCCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAGCATGCTc < 1:137586/67‑1 (MQ=25) aCCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGa < 1:231886/150‑1 (MQ=255) ccTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAg > 2:966199/1‑150 (MQ=255) cAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGcttc < 1:1420729/150‑1 (MQ=255) cTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTa < 1:528565/150‑1 (MQ=255) tCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTAc < 1:409347/150‑1 (MQ=255) tCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCACGCATAACAAAGaa < 2:1058921/97‑1 (MQ=255) tCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCACGCATAACAAAGaa > 1:1058921/1‑97 (MQ=255) atCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAata < 2:2182415/150‑1 (MQ=255) tCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGctt > 2:1492147/1‑137 (MQ=255) tCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGctt < 1:1492147/137‑1 (MQ=255) cTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTcac < 2:1821258/103‑1 (MQ=255) cTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTcac > 1:1821258/1‑103 (MQ=255) tAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaa > 1:579147/1‑150 (MQ=255) gAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaaga > 2:1860239/1‑150 (MQ=255) aaaCAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTca < 1:1829423/65‑1 (MQ=255) aaaCAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTca > 2:1829423/1‑65 (MQ=255) aaCAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaagaag < 1:99409/150‑1 (MQ=255) ttcttcGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATaaa < 1:1492760/136‑1 (MQ=255) ttcttcGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATaaa > 2:1492760/1‑136 (MQ=255) ttcGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGaaa > 2:1559781/1‑150 (MQ=255) tcGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGAGCCTTATACACATCACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGaaaa < 1:150301/150‑1 (MQ=255) cGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAAc < 2:579147/150‑1 (MQ=255) cATGCTGATGTTTGACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTaaaa > 1:33725/1‑150 (MQ=255) tGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACACACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCCTACAAAAATACAAGACGAACTCAAAAC‑AAAAAcc > 2:992067/1‑150 (MQ=255) tGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCAt > 1:2379167/1‑150 (MQ=255) gATCTCAAACATCAACCTGCTCGCGCCCTATATGAAAACTTCACACCGCTCATAACAAAGCACACTCACACGCTCACCACACAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAATAAGCACTGAAACCTAAAAACCAtt > 2:31636/1‑150 (MQ=255) tCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTATCa < 2:2379167/150‑1 (MQ=255) tCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCACAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTATCa < 2:568401/150‑1 (MQ=255) cAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGaaaa > 2:2291458/1‑133 (MQ=255) cAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGaaaa < 1:2291458/133‑1 (MQ=255) | GAGACACATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACG‑ACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCTCGCGCCCCTTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTATCA > NC_002947/4812079‑4812376 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |