Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 384,794 | C→G | 5.7% | A423A (GCC→GCG) | PP_0320 → | methyl‑accepting chemotaxis transducer |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 384,794 | 0 | C | G | 5.7% | 452.0 / 12.3 | 139 | A423A (GCC→GCG) | PP_0320 | methyl‑accepting chemotaxis transducer |
Reads supporting (aligned to +/- strand): ref base C (71/60); new base G (5/3); total (76/63) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.29e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 |
Only 100 of 142 total aligned reads displayed.
CGAGCGGCTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTCAGCCAGCTGGCCGACGAAGTCG > NC_002947/384647‑384942 | cGAGCGGCTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCgg > 2:801740/1‑150 (MQ=255) cGAGCGGCTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCgg < 1:2097593/150‑1 (MQ=255) cTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCg > 1:869959/1‑150 (MQ=255) tGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCgg > 1:142781/1‑150 (MQ=255) ccGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGt > 2:170563/1‑150 (MQ=255) cGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTc < 2:2122986/150‑1 (MQ=255) cGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTc < 1:801740/150‑1 (MQ=255) cGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTc < 1:2391302/150‑1 (MQ=255) aGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGGCATCGCCGGCATTGCGGGCGATgtcct < 1:1145400/136‑5 (MQ=255) aGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGGCATCGCCGGCATTGCGGGCGATgtcct > 2:1145400/1‑132 (MQ=255) tAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCac > 1:92070/1‑150 (MQ=255) aCCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCacga < 1:170563/150‑1 (MQ=255) ccAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCacgaga > 2:946954/1‑150 (MQ=255) ccAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCacgaga < 1:597404/150‑1 (MQ=255) ccAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCacgaga > 1:1042904/1‑150 (MQ=255) gtggACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCg > 2:1097937/1‑150 (MQ=255) gtggACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCg > 2:2017431/1‑150 (MQ=255) tggACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGt > 2:234593/1‑150 (MQ=255) gACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTg > 2:130374/1‑150 (MQ=255) gACAACACCGCCGAGCGCTCCGAGCGACAGCAGGAGATGAAAGCAATCTTCTCCACTGCGGTAGTCGAGATTGGCCTGGCCATACAGGACATCGCCCGCAATGCCGGCGATGCGGCGCAGGCGTCGCAGGCGGCACGAGACGAGGCGTTg > 2:276841/1‑150 (MQ=255) acaacaCCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGc < 2:1917367/150‑1 (MQ=255) aacaCCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACTGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAg > 2:1389936/1‑150 (MQ=255) aacaCCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAg > 1:313854/1‑150 (MQ=255) aacaCCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAg > 2:1464081/1‑150 (MQ=255) acCGCTGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGcc > 2:401948/1‑150 (MQ=255) cgccgAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCg < 2:1360444/118‑1 (MQ=255) cgccgAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCg > 1:1360444/1‑118 (MQ=255) cgccgAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGACGCCACTGCTGTACACGAGATGAGCCTGACCGTGCAAGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGCCACGCGTCGAGGCGTTGCAGGcgcg > 1:152972/1‑150 (MQ=255) aGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCCGTCGGCACGAGACGAGTCGTTGCAGGCCCGCGatg < 2:1352514/150‑3 (MQ=255) gcgcTCCGGGCGCCAGCAGGAGATGACCGAAATGGTTGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGGCGAGGCGTTGCAGGCCCGCGAggt > 2:197825/1‑150 (MQ=255) gcgcTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAggt < 2:1545973/150‑1 (MQ=255) cTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAggtggt < 2:2072646/150‑1 (MQ=255) tCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGgtggtg > 2:1581813/1‑150 (MQ=255) cGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCg > 1:1534931/1‑86 (MQ=255) cGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCa > 1:2112535/1‑150 (MQ=255) gggCGCCAGCAAGAGAAGACCCAAATGCGCGGCACTGCTGTACACGAGATGGGCATGACCGTGCAGGACATCGCCCGCAATGCCGGTGATACGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCTCGCGAGGTGTTGCaa < 2:1932946/150‑1 (MQ=255) cagcagGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATcc > 1:2227121/1‑150 (MQ=255) agGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTc < 2:496619/150‑1 (MQ=255) gagaTGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGt > 2:1034179/1‑150 (MQ=255) agaTGACCGAAATGGTTGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGGCGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTg < 1:197825/150‑1 (MQ=255) gaTGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTgg < 2:1789885/150‑1 (MQ=255) aCCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAg > 2:1867061/1‑114 (MQ=255) aCCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAg < 1:1867061/114‑1 (MQ=255) gAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGGCCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGGCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAg > 1:1112107/1‑150 (MQ=255) gAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGCTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAg < 2:1845456/150‑1 (MQ=255) aaTGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAggtgg > 2:246040/1‑122 (MQ=255) aaTGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAggtgg < 1:246040/122‑1 (MQ=255) aaTGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAggg < 2:1448153/150‑1 (MQ=255) ggTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCAt < 2:1072185/150‑1 (MQ=255) gTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGAt < 1:116385/127‑1 (MQ=255) gTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGAt > 2:116385/1‑127 (MQ=255) tCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTgg > 2:318670/1‑136 (MQ=255) gatctgctgTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAAATGCTGCGATGCTGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCgg < 1:1353465/147‑1 (MQ=255) ccACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCa > 2:806433/1‑83 (MQ=255) cACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCggg > 1:197348/1‑150 (MQ=255) aCTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGGGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGAATCGAGGACATGTCGGGc < 1:83127/150‑1 (MQ=255) aCTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGc < 2:1159493/150‑1 (MQ=255) tgctgTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTg < 2:1037137/128‑1 (MQ=255) tgctgTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTg > 1:1037137/1‑128 (MQ=255) tgTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACAt < 1:130374/150‑1 (MQ=255) tACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCg < 1:459041/140‑1 (MQ=255) tACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCg > 2:459041/1‑140 (MQ=255) tACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCg < 1:234593/150‑1 (MQ=255) tACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCAAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCg < 2:2013819/150‑1 (MQ=255) cacGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGc > 2:1947135/1‑150 (MQ=255) caagagaTGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGc < 1:855448/147‑1 (MQ=255) acGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCg < 1:2014632/147‑1 (MQ=255) acGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCa > 1:73971/1‑150 (MQ=255) acGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCa > 2:614780/1‑150 (MQ=255) gagaTGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAg > 2:348408/1‑150 (MQ=255) aTGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAggcg > 2:1326084/1‑150 (MQ=255) ccTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCacgagacga < 1:2159615/69‑1 (MQ=255) ccTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCacgagacga > 2:2159615/1‑69 (MQ=255) ccTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGa < 1:1692348/150‑1 (MQ=255) gatcaggTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGAt > 2:1671745/7‑150 (MQ=255) aCCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCg > 1:596914/1‑150 (MQ=255) ccGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCgg > 1:1935722/1‑150 (MQ=255) gCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTcag > 2:282607/1‑150 (MQ=255) aGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTgg > 2:122483/1‑100 (MQ=255) aGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTgg < 1:122483/100‑1 (MQ=255) aGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGAt < 2:2129681/140‑1 (MQ=255) aGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTcagcc > 2:1257020/1‑150 (MQ=255) gcATCGCCGGCATTGCGGGCGATGTGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTg < 1:1266502/95‑1 (MQ=38) aCATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTcagccagc < 2:1935722/150‑1 (MQ=255) aTCGCCGGCATTGCGGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTca < 2:2344829/142‑1 (MQ=255) aTCGCCGGCATTGCGGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTca > 1:2344829/1‑142 (MQ=255) aTCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGc > 1:1620957/1‑137 (MQ=255) aTCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGc < 2:1620957/137‑1 (MQ=255) tCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATg < 1:1788201/135‑1 (MQ=255) tgaccGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGGTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGTGCATGTCGGGCGAGATTGGCAAGGCGTCCGATTCGGTGAACGACCTGGc > 2:509507/4‑150 (MQ=255) cGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATc > 2:1833740/1‑84 (MQ=255) cGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATc < 1:1833740/84‑1 (MQ=255) ccGCATTGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTCAGCCAGCTGGCcga < 2:869959/150‑1 (MQ=255) ccGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTCAGCCAGCTGGCcga > 2:1883582/1‑150 (MQ=255) cGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGc > 2:1876645/1‑38 (MQ=255) cGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGc < 1:1876645/38‑1 (MQ=255) cGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTCAGCCAGCTGGCcgac > 1:832942/1‑150 (MQ=255) aaTGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTCAGCCAGCTGGCCGACGaa < 1:1034179/150‑1 (MQ=255) ccGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTCAGCCAGCTGGCCGACGAAGTCg > 1:1881722/1‑150 (MQ=255) cGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAg > 1:1221783/1‑88 (MQ=255) | CGAGCGGCTGCGACGGGCCGTGGAGCAGGTAACCCAGGTGGTGGACAACACCGCCGAGCGCTCCGGGCGCCAGCAGGAGATGACCGAAATGGTCGCCACTGCTGTACACGAGATGGGCCTGACCGTGCAGGACATCGCCCGCAATGCCGGCGATGCGGCCCAGGCGTCGCAGTCGGCACGAGACGAGGCGTTGCAGGCCCGCGAGGTGGTGCAACGATCCATTCGTGGCATCGAGGGCATGTCGGGCGACATCGGCAAGGCGGCCGATGCGGTCAGCCAGCTGGCCGACGAAGTCG > NC_002947/384647‑384942 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |