| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,841,156 | T→A | 5.1% | L12Q (CTG→CAG) | ccoO‑II → | cbb3‑type cytochrome c oxidase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,841,156 | 0 | T | A | 5.1% | 357.3 / 6.4 | 113 | L12Q (CTG→CAG) | ccoO‑II | cbb3‑type cytochrome c oxidase subunit |
| Reads supporting (aligned to +/- strand): ref base T (56/51); new base A (2/4); total (58/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
TTCTTCGCCAGCGGCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCCGCGATATCTACATCCGCG > NC_002947/4841009‑4841305 | ttcttcGCCAGCGGCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCctgc > 1:1787334/1‑150 (MQ=255) cAGCGGCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCcttc > 1:1878276/1‑150 (MQ=255) cAGCGGCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCcttc > 1:1411227/1‑150 (MQ=255) aGCGGCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCAGCAGGCctatg < 2:1153048/150‑4 (MQ=255) ggCATGCGGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCAGCCAATTCAAGTTCTGG‑TGAAGATTCCCGCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCa < 1:286238/150‑1 (MQ=255) gCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCAt < 1:640915/150‑1 (MQ=255) aTGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATgg < 2:288680/150‑1 (MQ=255) tgctgATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCAt > 1:1517103/1‑150 (MQ=255) tGGCCTACAACGTGTTCCGTACAGTCATTTGCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑t < 1:611739/150‑1 (MQ=255) gCCTACAACGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGa > 2:1215834/1‑150 (MQ=255) gCCTACAACGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGa > 1:1792811/1‑150 (MQ=255) gCCTACAACGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGGCAGCGCCG‑TGa < 2:1792811/150‑1 (MQ=255) cTACAACGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGc > 1:1468770/1‑150 (MQ=255) cTACAACGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGc > 1:1805997/1‑150 (MQ=255) aCGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCAGCAGGCctat < 2:792363/124‑3 (MQ=255) aCGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCAGCAGGCctat > 1:792363/1‑122 (MQ=255) cGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGt < 1:852321/150‑1 (MQ=255) ttgtTCCGGACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTg < 1:407165/149‑1 (MQ=255) gtgtTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTg > 1:1793194/1‑150 (MQ=255) ttCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGcc < 1:1403913/150‑1 (MQ=255) ttCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGcc > 2:1975364/1‑150 (MQ=255) ttCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGAATTCGCCATCGTGGTCGCCG‑TGAGCGTCGGTGGcc > 2:2108755/1‑150 (MQ=255) tCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCt < 2:1411227/150‑1 (MQ=255) gtaccgtacGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACGGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGAc > 1:1045078/1‑150 (MQ=255) ccgtacGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCa > 1:689800/1‑150 (MQ=255) gtacGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGa < 1:907599/150‑1 (MQ=255) gtacGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGa > 1:599791/1‑150 (MQ=255) tacGTGCCGCCAA‑CCCGGCACAGGCTGGAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTTCTTGCGT‑TGGGCGTCGGTGGCCTGACCCAGAt > 1:139/1‑150 (MQ=255) tGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATc > 2:1362883/1‑147 (MQ=255) gccgccAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTcc < 2:578942/150‑1 (MQ=255) ccAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCt > 2:2207991/1‑150 (MQ=255) ccAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGACGTGGAGAAGAAAATAGGCCTGCTAGGGTTATTCATTGTAATCGCGG‑GTAGAGTTGGTGGCTTGACCTAGATTGtaaagct > 2:814192/1‑144 (MQ=255) cccGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGttt > 1:1045639/1‑150 (MQ=255) gCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACg > 2:589637/1‑150 (MQ=255) tGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTc > 1:165841/1‑150 (MQ=255) aaGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCAc > 1:1259525/1‑150 (MQ=255) ccgccAAGATCGTCGTTGTGGTAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGGAGCAGCTGCTGAGCGTTGTT‑GCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACcaacaa < 2:1418880/150‑1 (MQ=37) ccAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGcc > 1:1078595/1‑150 (MQ=255) gATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCATCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTc > 1:1379081/1‑150 (MQ=255) aTCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGc > 2:2103075/1‑117 (MQ=255) aTCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGc < 1:2103075/117‑1 (MQ=255) gtcgtTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAgg < 1:817234/150‑1 (MQ=255) tcgtTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCcttc > 2:782094/1‑64 (MQ=255) tcgtTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCcttc < 1:782094/64‑1 (MQ=255) gtTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCa < 2:1259525/150‑1 (MQ=255) tgGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGaa > 2:327246/1‑150 (MQ=255) gggAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAg > 2:866129/1‑150 (MQ=255) gggAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCAGGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAg < 2:984044/150‑1 (MQ=255) gcACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGGTTTTCCAGGGCGTCACCAACAAGCCGGTCGAGGGCATGAAGCCgcgc > 2:2115052/1‑150 (MQ=255) cACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCGGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCa > 1:259714/1‑150 (MQ=255) cACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCgg > 1:1491390/1‑129 (MQ=255) cACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGaa > 1:878300/1‑142 (MQ=255) cACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGaa < 2:878300/142‑1 (MQ=255) aCTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGc < 1:142335/79‑1 (MQ=255) aCTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGc > 2:142335/1‑79 (MQ=255) aCTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCCCAc > 2:642086/1‑150 (MQ=255) aCTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTGCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCAc > 1:559663/1‑150 (MQ=255) tgatgaAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCt < 2:2399691/79‑1 (MQ=255) tgatgaAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCt > 1:2399691/1‑79 (MQ=255) atgaagcatgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTg > 2:1522277/1‑73 (MQ=255) atgaagcatgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTg < 1:1522277/73‑1 (MQ=255) atgaagcatgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACcgcg > 2:2260536/1‑150 (MQ=255) atgaagcatgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACcgcg > 1:1093255/1‑150 (MQ=255) gaagcatgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGAAAGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCt > 1:2098979/1‑150 (MQ=255) gaagcatgaagcCGCCGCGACGGACGTCGTGCACCTGGCCTTGGCGGTTGTCAGCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCt < 2:1468770/150‑1 (MQ=18) agcatgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTgg > 1:930383/1‑150 (MQ=255) gcatgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGTCATGAAGCCGCGCACCGCGCTGGa > 1:2188135/1‑150 (MQ=255) gcatgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGa > 2:2225774/1‑150 (MQ=255) catgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGttt > 1:1794164/1‑93 (MQ=255) catgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGttt < 2:1794164/93‑1 (MQ=255) catgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAg < 2:1705334/150‑1 (MQ=255) catgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAg < 2:1805997/150‑1 (MQ=255) tgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGt < 2:1787334/150‑1 (MQ=255) tgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCAGACTCAGAACGTTGCGCTCTTTATCCATCACGTCACCATCAAGCCTGTCGAGGTCATGAATCCGCGCACCGCGCTGGAGGt < 2:1480050/150‑1 (MQ=255) gaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTg < 2:259714/150‑1 (MQ=255) gcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGaa < 1:1719569/150‑1 (MQ=255) gcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGaa < 2:1045639/150‑1 (MQ=255) gcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGaa < 2:1045078/150‑1 (MQ=255) ccGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGCACGTCACCAATAAGCCGGTCGAGGGCATGAAGCCGCGCGTCGAGCTTGAGGTgtatt < 2:599791/150‑5 (MQ=25) tCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGa < 1:1216332/112‑1 (MQ=255) tCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGa > 2:1216332/1‑112 (MQ=255) tCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGcc > 2:298523/1‑150 (MQ=255) gagaAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCcgc < 1:2108755/150‑1 (MQ=255) agaagaACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCcgcg < 1:327246/150‑1 (MQ=255) gaagaaCATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCAt > 1:560552/1‑114 (MQ=255) gaagaaCATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCAt < 2:560552/114‑1 (MQ=255) gaagaaCATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCCGCGa < 2:1359515/150‑1 (MQ=255) aagaaCATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCa > 1:667344/1‑112 (MQ=255) aagaaCATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCa < 2:667344/112‑1 (MQ=255) aagaaCATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGAAAGGCCGCGat > 2:210239/1‑150 (MQ=255) gaaCATAGGCCTGCTGGCCTTCTTCCTGGTCAGCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCCGCGatat > 1:1271497/1‑150 (MQ=255) gaaCATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGaa > 1:141034/1‑139 (MQ=255) gaaCATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGaa < 2:141034/139‑1 (MQ=255) aCATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAg > 1:312492/1‑104 (MQ=255) agaaGGCCAGCAGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAg < 2:1480520/134‑1 (MQ=255) agaaGGCCAGCAGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAg > 1:1480520/4‑137 (MQ=255) ggCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCgcgc < 2:189894/121‑1 (MQ=255) gCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTTACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGaa > 2:2145342/1‑131 (MQ=255) gCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGaa < 1:2145342/131‑1 (MQ=255) tgctgGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCCGCGATATCTACATCcgcg > 1:1554033/1‑150 (MQ=255) | TTCTTCGCCAGCGGCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAA‑CCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCG‑TGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCCGCGATATCTACATCCGCG > NC_002947/4841009‑4841305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |