| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,850,203 | C→T | 6.9% | intergenic (+75/‑112) | hemN → / → fnrA | oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,850,203 | 0 | C | T | 6.9% | 327.9 / 9.4 | 114 | intergenic (+75/‑112) | hemN/fnrA | oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator |
| Reads supporting (aligned to +/- strand): ref base C (52/54); new base T (3/5); total (55/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
TCGGTATGCATGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCCACACAACCAGGC > NC_002947/4850060‑4850352 | tCGGTATGCATGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTg > 1:661264/1‑150 (MQ=255) tGCATGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGTGGCCTGCCggga < 2:1874750/150‑2 (MQ=255) tGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTc > 2:351964/1‑150 (MQ=255) tGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTc > 1:58407/1‑150 (MQ=255) gtTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCa < 2:1920496/150‑1 (MQ=255) gtTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCa < 1:439540/150‑1 (MQ=255) gcgTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCa > 2:629677/1‑150 (MQ=255) gCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATcg > 2:1411692/1‑150 (MQ=255) cGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATcgc < 1:266885/150‑1 (MQ=255) cacaACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGcaca < 2:1546607/150‑1 (MQ=255) caACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACt > 2:2233712/1‑150 (MQ=255) ccGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGc < 1:351964/150‑1 (MQ=255) ccGCCAGCGTTATTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGc < 1:2176365/150‑1 (MQ=255) gCCAGCGTTTCTCGCGAGTGATCTGAAAAACAGGGCGTTCAACCGCATGGACAGGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCt > 2:1952222/1‑150 (MQ=255) ccAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATAAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAgc > 1:411500/1‑122 (MQ=255) gAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTg > 2:1265396/1‑150 (MQ=255) aGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGTGGCCTGCCggga > 1:2160888/1‑96 (MQ=255) aGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGTGGCCTGCCggga < 2:2160888/97‑2 (MQ=255) gTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGGGAg > 1:1108718/1‑150 (MQ=255) gTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTCGCCTACACCCTGTGTCGTGAg < 2:58407/150‑1 (MQ=255) tGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGt > 2:660856/1‑150 (MQ=255) gATCTGAAAAACAATGCGTTCAACCGCATGTACAAGCTTCCTTGTCAGGCACACTATGACCACACAATGCCTGACGGCAGGCCACCTGCCGGGGCTTCGCCCGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCTTGAGtt > 2:982070/1‑150 (MQ=255) aTCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGc > 1:1454022/1‑128 (MQ=255) aTCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGc < 2:1454022/128‑1 (MQ=255) tCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGcc < 2:617534/128‑1 (MQ=255) tCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGcc > 1:617534/1‑128 (MQ=255) cTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTAcc < 1:1545987/150‑1 (MQ=255) tGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTAccc > 1:300450/1‑150 (MQ=255) tGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTAccc < 2:661264/150‑1 (MQ=255) tGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTAGCAACCAGGCGCGTGAGCAT‑‑CAAACACGGTCCGACACCCTGTGTCGTGAGTTAccc > 2:1834225/1‑150 (MQ=255) tGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAACACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTAccc > 2:1629353/1‑150 (MQ=255) aaaaaCAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGtt > 2:1624884/1‑90 (MQ=255) aaaaaCAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGtt < 1:1624884/90‑1 (MQ=255) aaaaaCAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGc > 1:2091785/1‑123 (MQ=255) aaaCAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTAc < 2:1556928/150‑1 (MQ=255) aCAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGa < 1:1469375/150‑1 (MQ=255) aaGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACt > 2:2340627/1‑150 (MQ=255) aGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACtt < 1:290529/150‑1 (MQ=255) gTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCTTACACCCTGTGTCGTGAGTTACCCTTACGACTTAtgt < 1:1952222/150‑1 (MQ=255) gTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTAtgt > 1:1750940/1‑150 (MQ=255) ttCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTAtgtg < 2:300450/150‑1 (MQ=255) tCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTAtgtgt < 1:1265396/150‑1 (MQ=255) aCCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAAC‑‑CCGCACCCACATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCt > 1:1250469/1‑150 (MQ=255) aTGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGa > 1:1380102/1‑120 (MQ=255) aTGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGa < 2:1380102/120‑1 (MQ=255) gACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCcaca > 2:172562/1‑150 (MQ=255) aCAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACaa > 2:753311/1‑150 (MQ=255) cAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAg < 2:1750940/150‑1 (MQ=255) aaGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGa > 2:2911/1‑114 (MQ=255) aGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTCCCCCTACGCCTTATGTGTGCTTTCCCACAAGGa < 1:2233712/150‑1 (MQ=255) gCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGc > 2:1292514/1‑94 (MQ=255) cTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATc > 1:2140445/1‑150 (MQ=255) tCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGa > 1:314727/1‑150 (MQ=255) ttGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGNCACCTGNCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTTTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTc > 1:1766392/1‑150 (MQ=255) ttGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTc < 2:2140445/150‑1 (MQ=255) ttGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGGCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTc > 1:752009/1‑150 (MQ=255) gccAGCCACACTATGAGCACACAAGGACTCCCGGCAAGCCAACTGCCGGGGTTTCGCCAGC‑‑ACGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTCCGACTTATGTGAGCTTTCACACAAGGATCGATTCaa > 2:129452/3‑150 (MQ=255) gTCAGGCACACTATGAGCACACAAGGCCTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCaa < 2:1098501/150‑1 (MQ=255) tCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCtt > 2:1971366/1‑129 (MQ=255) tCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCtt < 1:1971366/129‑1 (MQ=255) gCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGa < 1:1797153/99‑1 (MQ=255) gCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGa > 2:1797153/1‑99 (MQ=255) cacaCTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTAtgtgtg < 2:395200/121‑1 (MQ=255) cacaCTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTAtgtgtg > 1:395200/1‑121 (MQ=255) acacTATGAGCACACAAGGACTCCCGGCAGGCCAACTACCGCGGCTTCGTTAGC‑‑TCGCACGAGCATCGCTCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCg > 1:657964/1‑150 (MQ=255) cacTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGa > 1:777249/1‑150 (MQ=255) acTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAg > 2:1029762/1‑150 (MQ=255) acTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTCTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGt < 2:541185/93‑1 (MQ=255) tATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCaaa < 1:128839/140‑1 (MQ=255) tATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCaaa > 2:128839/1‑140 (MQ=255) aTGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACCCTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCa < 2:1704928/150‑1 (MQ=255) gAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGcc > 1:1133026/1‑73 (MQ=255) gAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGcc < 2:1133026/73‑1 (MQ=255) gAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTc < 1:218703/86‑1 (MQ=255) gAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTc > 2:218703/1‑86 (MQ=255) gCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTc > 1:2257480/1‑149 (MQ=255) gCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTc < 2:2257480/149‑1 (MQ=255) acacaAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCaaa > 1:289920/1‑150 (MQ=255) caAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTcc > 1:2059275/1‑135 (MQ=255) caAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTcc < 2:2059275/135‑1 (MQ=255) ccgatcTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCTAAAAAATTTCGTACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTgc < 2:1269679/145‑1 (MQ=255) aaGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTgc < 1:1411692/150‑1 (MQ=255) accccGGCAGGTGGCCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGa > 1:247708/3‑90 (MQ=255) accccGGCAGGTGGCCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGa < 2:247708/88‑1 (MQ=255) tCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCcac > 1:1333995/1‑150 (MQ=255) ccccGGCAGGTGGCCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCttt > 1:2352768/2‑103 (MQ=255) cccGGCAGGTGGCCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCa < 1:187255/133‑1 (MQ=255) ccGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTAtgtgtg > 2:2107437/1‑97 (MQ=255) ccGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCt < 1:905999/99‑1 (MQ=255) ccGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCt > 2:905999/1‑99 (MQ=255) ccGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGa > 2:1331392/1‑128 (MQ=255) ccGGCAGGCCACCTGCCGGGGTTTAGGCTTC‑‑TCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTgcgagatcgg > 1:1269679/1‑143 (MQ=255) ccGGCAGGCCACCTGACGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGa < 1:1331392/128‑1 (MQ=255) gCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCCACACAAc < 1:2048339/150‑1 (MQ=255) gCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATc < 1:1557688/106‑1 (MQ=255) gCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATc > 2:1557688/1‑106 (MQ=255) gCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCCACACaa < 2:995042/145‑1 (MQ=255) gCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCCACACaa > 1:995042/1‑145 (MQ=255) cccACCTGCCGGCGTTTCGCCACC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCCACACAACCAgg < 2:752009/149‑1 (MQ=255) ccACCTGCCGGGGTTTCGCCAGC‑‑GCGCCCCATCACCGCGCCCTCGGTGCCACACCCTGTGTCGTGAGTTAACCTCACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCCACACAACCAGGc < 1:2340627/150‑1 (MQ=255) | TCGGTATGCATGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGC‑‑GCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCCACACAACCAGGC > NC_002947/4850060‑4850352 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |