| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 390,096 | A→C | 5.0% | M123L (ATG→CTG) | soxA → | sarcosine oxidase subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 390,096 | 0 | A | C | 5.0% | 310.7 / 6.2 | 99 | M123L (ATG→CTG) | soxA | sarcosine oxidase subunit alpha |
| Reads supporting (aligned to +/- strand): ref base A (47/47); new base C (3/2); total (50/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.51e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
GATCGGCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGAACCGGCACTGC > NC_002947/389948‑390242 | gATCGGCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCatgat < 1:2061775/150‑1 (MQ=255) gCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATgccgc < 1:1036979/150‑1 (MQ=255) gCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTCGGCGGCATCATGCTgccgc < 1:740722/150‑1 (MQ=255) cAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGTTTGGCCGAACGCACACAACGAAACTCCAGTCACCTTGGTGAAGGTTGGCGGCAGCATGATCCCGCCggg > 1:2340773/1‑150 (MQ=255) gCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCt < 1:1144225/150‑1 (MQ=255) gAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTc < 1:513793/150‑1 (MQ=255) gCTACCCAGACCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTctac < 2:1292880/150‑1 (MQ=255) tACCCAGATCCCCAACGTGCGCGCCACCCAATAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTctacta < 2:1929092/150‑1 (MQ=255) tACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTctacta > 2:1937260/1‑150 (MQ=255) ccAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCGACCTGGACCAACGGTAGTCCTTACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACaa > 1:2100382/1‑150 (MQ=255) ccAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACaa > 2:221577/1‑150 (MQ=255) aGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACaaaa > 2:493909/1‑150 (MQ=255) aGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACaaaa > 2:162927/1‑150 (MQ=255) cccAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTc > 2:1726038/1‑150 (MQ=255) ccAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCa > 1:1580697/1‑150 (MQ=255) cAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCAt < 2:2260847/150‑1 (MQ=255) cAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCAt > 1:1094728/1‑150 (MQ=255) cGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑a < 1:1302572/150‑1 (MQ=255) gcCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCaaa < 2:1580697/150‑1 (MQ=255) cccAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGt > 1:1132220/1‑150 (MQ=255) ccAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTc > 1:1637731/1‑133 (MQ=255) ccAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTc < 2:1637731/133‑1 (MQ=255) cAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTc > 2:1766211/1‑150 (MQ=255) ggCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGAt < 1:493909/150‑1 (MQ=255) aCTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCgg < 2:1535688/104‑1 (MQ=255) aCTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCgg > 1:1535688/1‑104 (MQ=255) aCTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTctac > 2:1333771/1‑112 (MQ=255) aCTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTctac < 1:1333771/112‑1 (MQ=255) tGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCt > 2:1039037/1‑141 (MQ=255) tGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCt < 1:1039037/141‑1 (MQ=255) gTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTa < 2:1094728/150‑1 (MQ=255) aCGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACg < 2:2100382/150‑1 (MQ=255) cgcgGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTACCGCATGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACga < 1:2068284/150‑1 (MQ=255) tggccattGTCGCCACCAGCACCAACGGTTGGCCGATCGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACgaga > 2:2210519/7‑150 (MQ=255) gggCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGACTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGaa > 1:793842/1‑150 (MQ=255) gggCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGAAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGaa < 1:1747206/150‑1 (MQ=255) ccattGTCGCCACCAGCACCAACGGTTGGCCGATCGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGt < 1:2210519/147‑1 (MQ=255) ccTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTa > 2:2044036/1‑150 (MQ=255) ttGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACa > 2:1380416/1‑150 (MQ=255) tCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATcc > 1:2192503/1‑150 (MQ=255) gCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTc < 2:1109545/90‑1 (MQ=255) gCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTc > 1:1109545/1‑90 (MQ=255) ccaccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCAG‑CTCCCAGGCACTGCGCAAGGCAGCTGTGACGCGAAATCGTTCTGGATGACTTACGAGAATTACATCCGTa > 1:284609/1‑150 (MQ=255) caccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCtt < 2:2250826/87‑1 (MQ=255) caccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCtt > 1:2250826/1‑87 (MQ=255) caccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTaa > 1:1048130/1‑150 (MQ=255) accaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTaaa > 2:2274967/1‑150 (MQ=255) aGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAgcc < 2:1223076/150‑1 (MQ=255) cACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTcta < 2:1038350/84‑1 (MQ=255) cACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTcta > 1:1038350/1‑84 (MQ=255) aCCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAGGTACATCCGTAAAgcagcc > 1:1662268/1‑150 (MQ=255) aaCGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGc > 2:429877/1‑150 (MQ=255) ccGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGt < 2:832148/150‑1 (MQ=255) gAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTgc < 2:1690433/150‑1 (MQ=255) cGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGcgcc > 1:362765/1‑150 (MQ=255) caacGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCAt < 1:1993495/75‑1 (MQ=255) cgacgTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGaa < 1:429877/150‑1 (MQ=255) gacgTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACgag < 1:731419/102‑1 (MQ=255) gacgTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACgag > 2:731419/1‑102 (MQ=255) gacgTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGt > 1:2338187/1‑135 (MQ=255) gacgTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGt < 2:2338187/135‑1 (MQ=255) gacgTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTgc > 2:1585451/1‑137 (MQ=255) gacgTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTgc < 1:1585451/137‑1 (MQ=255) gacgTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAAc < 2:362765/150‑1 (MQ=255) tCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATc > 1:1574450/1‑150 (MQ=255) tCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATc < 2:1259556/150‑1 (MQ=255) cATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATcc < 2:284609/150‑1 (MQ=255) aTGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAgccgc < 2:1246165/116‑1 (MQ=255) aTGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAgccgc > 1:1246165/1‑116 (MQ=255) aTGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCGGCCGGCCGGGGCCGTGCGCCGCTGCAGAACGATCCt > 2:760148/1‑150 (MQ=255) gggCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGa < 1:344426/150‑1 (MQ=255) ggCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCNGTAAAGNCGCCGGCCTGGGNCGTGCGCCGCTGCAGAACGATCCTGAc < 1:1766211/150‑1 (MQ=255) gCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAgccgcc < 2:1651201/113‑1 (MQ=255) gCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAgccgcc > 1:1651201/1‑113 (MQ=255) gCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACa < 2:656212/150‑1 (MQ=255) tCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAATCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCt > 2:2098102/1‑150 (MQ=255) tCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGa > 1:390497/1‑139 (MQ=255) tCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGa < 2:390497/139‑1 (MQ=255) tCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCt < 1:1726038/150‑1 (MQ=255) tCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCt < 1:950695/150‑1 (MQ=255) tCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAgccgc > 2:290143/1‑106 (MQ=255) tCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAgccgc < 1:290143/106‑1 (MQ=255) tCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACg > 1:960870/1‑150 (MQ=255) cGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGa < 1:1380416/150‑1 (MQ=255) ggCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGAc < 1:162927/150‑1 (MQ=255) gCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACa > 1:466475/1‑90 (MQ=255) gCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACa < 2:466475/90‑1 (MQ=255) ggTTGGCGGCAGCATGATGCCGCTGGGCTTCTACTACAAAACCTTCAt > 1:1743470/1‑48 (MQ=255) ggTTGGCGGCAGCATGATGCCGCTGGGCTTCTACTACAAAACCTTCAt < 2:1743470/48‑1 (MQ=255) ccggcggcATCATGCTGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGa > 1:227713/3‑150 (MQ=255) cggcggcATCATGCTGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAg < 1:2343286/78‑1 (MQ=39) cggcggcATCATGCTGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAg > 2:2343286/2‑79 (MQ=39) gcggcATCATGCTGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGAAcc > 1:953952/1‑150 (MQ=255) gcggcAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGAAcc > 2:331972/1‑150 (MQ=255) cggcAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGAACCg < 1:2044036/150‑1 (MQ=255) ggcAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGAACCgg > 2:371361/1‑150 (MQ=255) catcatGCCGCCGTGCTTCTACTACAAAACCTTCATGT‑ACCCACAATCGTTCTGGATGACTTACGAGAATTACTTCCGTAAAGCCGCCGGCCCGGGCGGTGCGCCCCTGCAGATCGATCCTGACAGCTACGACTACGCGCACCGGCACTg < 2:799975/150‑1 (MQ=255) atgatgCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGAACCGGCACTGc > 1:1710478/1‑150 (MQ=255) gatgCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGaa > 2:499513/1‑66 (MQ=255) gatgCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGaa < 1:499513/66‑1 (MQ=255) | GATCGGCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGT‑ACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGAACCGGCACTGC > NC_002947/389948‑390242 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |