| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,855,584 | T→G | 7.9% | I106M (ATT→ATG) | PP_4270 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,855,584 | 0 | T | G | 7.9% | 237.7 / 9.3 | 87 | I106M (ATT→ATG) | PP_4270 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (35/45); new base G (2/5); total (37/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 | |||||||||||
AAGTGGGCGCTCGCCCCGAGTTCCACGTCATGGCCCGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCAACCCTGCAACCACTGCTGGACCACGGCCAGTTGCACCGTGA > NC_002947/4855436‑4855730 | aaGTGGGCGCTCGCCCCGAGTTCCACGTCATGGCCCGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATtc > 2:1925399/1‑150 (MQ=255) gTGGGCGCTCGCCCCGAGTTCCACGTCATGGCCCGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATtcat < 1:2254347/150‑1 (MQ=255) ggCGCTCGCCCCGAGTTCCACGTCATGGCCCGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAg < 2:1704368/150‑1 (MQ=255) gcTCGCCCCGAGTTCCACGTCATGGCCCGCCTGCGCCTGGAGGAGGCCATGGGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATGAATCAgcgg < 2:850225/150‑2 (MQ=255) gcTCGCCCCGAGTTCCACGTCATGGCCCGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATGAATCAgcgg < 1:360299/150‑2 (MQ=255) tCGCCCCGAGTTCCACGTCATGGCCCGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCGCGCTGATGAATCAGCGGGa < 1:1075369/150‑1 (MQ=255) tCGCCCCGAGTTCCACGTCATGGCCCGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGa > 2:1073621/1‑150 (MQ=255) tCGCCCCGAGTTCCACGTCATGGCCCGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGa < 2:2064652/150‑1 (MQ=255) cGCCCCGAGTTCCACGTCATGGCCCGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGAc < 2:2127985/150‑1 (MQ=255) cccGAGTTCCACGTCATGGCCCGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTa > 2:354657/1‑150 (MQ=255) cGAGTTCCACGTCATGGCCCGCCTGCGCCTGGAGGAGAACATGACCAGCGGAGATATTAATGTACGTTTCTACGTCAGTACCCAGTGGCGCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACt > 2:2080700/1‑150 (MQ=255) gAGTTCCACGTCATGGCCCGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTg < 1:354657/150‑1 (MQ=255) tCCACGTCATGGCCTGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTTAGTACCCATGGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTAACCCGCCCATTCATCAGCGCGACGTACTGGTTg < 2:1049038/150‑1 (MQ=255) cACGTCATGGCCCGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGgc > 2:130811/1‑150 (MQ=255) aCGTCATGGCCCGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGgcc > 1:1833555/1‑150 (MQ=255) ccGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATTTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCACTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGa > 2:545154/1‑150 (MQ=255) ccGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTg > 1:800588/1‑137 (MQ=255) ccGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTg < 2:800588/137‑1 (MQ=255) ccGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGa > 2:1922759/1‑150 (MQ=255) ccGCCTGCGCCTCGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCACCGACCGTCCAAGGGATTTTGTGCGGAGTATCCCGCTGATTCATCAGCGCGACGTCCTGGTTGGCCGCCCCGGccc > 2:831761/1‑148 (MQ=255) gcgcctgGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCAc > 1:1813272/1‑150 (MQ=255) ctgGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCg > 2:288813/1‑150 (MQ=255) aggCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGcccc < 1:1922759/150‑1 (MQ=255) ccATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCgg > 1:823302/1‑150 (MQ=255) cATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTa < 2:1063133/109‑1 (MQ=255) cATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTa > 1:1063133/1‑109 (MQ=255) agcagcGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCaa < 2:1813272/150‑1 (MQ=255) cagcGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACt < 1:288813/150‑1 (MQ=255) cggcgATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGcc < 1:1646465/150‑1 (MQ=255) ggcgATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATga < 2:1554417/133‑2 (MQ=255) ggcgATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGc > 1:1554417/1‑133 (MQ=255) gagATTTTGGTGTTCGTGGCTACGTGAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCAc < 2:1715892/148‑1 (MQ=255) tatTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCgg > 1:238540/1‑111 (MQ=255) tatTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCgg < 2:238540/111‑1 (MQ=255) atTGATGTGCTTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAg > 2:834593/1‑150 (MQ=255) atTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCGCGCTGATGAATCAGCGGGata < 1:1509008/91‑3 (MQ=38) atTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCGCGCTGATGAATCAGCGGGata > 2:1509008/1‑89 (MQ=38) atTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGTGTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAg < 2:2133385/150‑1 (MQ=255) atTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAg < 2:293230/150‑1 (MQ=255) ttGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAgg < 2:1215635/150‑1 (MQ=255) tgtgCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGAt > 1:2123782/1‑150 (MQ=255) gtgCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTgg < 2:904094/95‑1 (MQ=255) gtgCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTgg > 1:904094/1‑95 (MQ=255) gtgCGTTGCGACGTGAGTACCCAGTGGCTCAACGACCGTACAAGGGATTTTGTGTGGAGTATCTCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATc < 2:105288/150‑1 (MQ=255) tgCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGa > 1:1486936/1‑117 (MQ=255) tgCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGa < 2:1486936/117‑1 (MQ=255) tgCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCg < 2:1076744/150‑1 (MQ=255) tgCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATGAATCAgcgg > 1:2145901/1‑79 (MQ=255) tgCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATGAATCAgcgg < 2:2145901/80‑2 (MQ=255) gCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGACCAGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCgg < 1:1267723/150‑1 (MQ=255) gCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGCATCCCGCTGATTCACCCGCGCGACGTACTGGTTGGCCCCTGCGTCTACAGCACCCCGATGCCCCCGGAGCAACTGCCCCCCCAGGCGATCgg < 1:1267755/150‑1 (MQ=255) cGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGa > 2:1779389/1‑80 (MQ=255) cGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGa < 1:1779389/80‑1 (MQ=255) gTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGTGTGTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCa > 1:1508000/1‑150 (MQ=255) cTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGCTCGGCACGGt > 2:640479/1‑150 (MQ=255) gTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTg > 2:1889785/1‑150 (MQ=255) tCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTgg < 1:2320758/150‑1 (MQ=255) cAGTACCCAGTGGCTCAAGGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGTAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTggg < 2:2396622/150‑1 (MQ=255) tACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGccc < 2:1075989/106‑1 (MQ=255) tACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGccc > 1:1075989/1‑106 (MQ=255) aCCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTac > 2:116228/1‑150 (MQ=255) cccAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTaca < 1:2080700/150‑1 (MQ=255) cccAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTaca < 2:437239/150‑1 (MQ=255) ccAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGAt < 2:1362393/99‑1 (MQ=255) ccAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGAt > 1:1362393/1‑99 (MQ=255) ccAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTacac < 1:1889785/150‑1 (MQ=255) cAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACAcc < 1:130811/150‑1 (MQ=255) aGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGAt > 1:441192/1‑97 (MQ=255) aGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGAt < 2:441192/97‑1 (MQ=255) cTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGc < 2:2092339/109‑1 (MQ=255) cTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGc > 1:2092339/1‑109 (MQ=255) aaCGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCaa < 2:233055/148‑1 (MQ=255) aaCGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCaa > 1:233055/1‑148 (MQ=255) tCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTacac < 2:252337/132‑1 (MQ=255) tCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTacac > 1:252337/1‑132 (MQ=255) aGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCaa > 2:2386760/1‑136 (MQ=255) aGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCaa < 1:2386760/136‑1 (MQ=255) aGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCAACCCTGCAACCActg > 2:439939/1‑150 (MQ=255) gATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCAACCCTGCAACCActgctg < 2:2123782/150‑1 (MQ=255) gATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCAACCCTGCAACCActgctg < 2:1972125/150‑1 (MQ=255) gATTTTGTGTGGAGTATCCCGCCGCTTCCTCAGCGCGACCTACTTGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCAACCCTGCAACCActgctg < 1:1736912/150‑1 (MQ=255) aTTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCAACCCTGCAACCACTGCTgg < 2:1926929/150‑1 (MQ=255) aTTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCAACCCTGCAACCACTGCTgg < 2:87265/150‑1 (MQ=255) tgtgGAGTATCACGCTGATTCATCAGCACGACGCACTGGCTGGCCGCCCCGGCGACAGCACCCCGATACCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCAATTCAACCCTTCAACCACTACTGGACCAcc > 2:537177/1‑149 (MQ=255) gAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCAACCCTGCAACCACTGCTGGACCACGGCCa > 1:1987180/1‑150 (MQ=255) gAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCAACCCTGCAACCACTGCTGGACCACGGCCa < 1:1725268/150‑1 (MQ=255) aGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGCTGTCGCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCAACCCTGCAACCACTGCTGGACCACGGCCAg < 1:1832560/150‑1 (MQ=255) tATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCAACCCTGCAACCACTGCTGGACCACGGCCAGtt > 2:332226/1‑150 (MQ=255) gATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCAACCCTGCAACCACTGCTGGACCACGGCCAGTTGCACCGTGa < 2:1987180/150‑1 (MQ=255) | AAGTGGGCGCTCGCCCCGAGTTCCACGTCATGGCCCGCCTGCGCCTGGAGGAGGCCATGAGCAGCGGCGATATTGATGTGCGTTGCTACGTCAGTACCCAGTGGCTCAACGACCGTCCAAGGGATTTTGTGTGGAGTATCCCGCTGATTCATCAGCGCGACGTACTGGTTGGCCGCCCCGGCGACAGCACCCCGATGCCCCCGGAGCAACTGCCACCCCAGGCGATCGGCACGGTGCTGGGCTACACCTATTCAACCCTGCAACCACTGCTGGACCACGGCCAGTTGCACCGTGA > NC_002947/4855436‑4855730 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |