| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,858,564 | A→C | 8.1% | intergenic (‑25/+200) | PP_mr50 ← / ← ligA | Bacteria_large_SRP ncRNA/DNA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,858,564 | 0 | A | C | 8.1% | 195.4 / 6.2 | 73 | intergenic (‑25/+200) | PP_mr50/ligA | Bacteria_large_SRP ncRNA/DNA ligase |
| Reads supporting (aligned to +/- strand): ref base A (37/30); new base C (4/2); total (41/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.15e-01 | |||||||||||
CGACCCCAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGG > NC_002947/4858422‑4858713 | cGACCCCAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTATCGCTGAGCAGCGa > 2:1042546/1‑150 (MQ=255) cAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGa < 1:1078530/137‑1 (MQ=255) cAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGa > 2:1078530/1‑137 (MQ=255) cAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGgcg > 1:1518211/1‑150 (MQ=255) gAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTa > 1:1935503/1‑150 (MQ=255) gAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTa > 1:1935424/1‑150 (MQ=255) cccACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGCTCAGCGAgacat > 1:1192970/1‑129 (MQ=255) cccACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGCTCAGCGAgacat < 2:1192970/133‑5 (MQ=255) cccACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCtt > 1:750627/1‑150 (MQ=255) cccACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCtt > 2:1029510/1‑150 (MQ=255) cccACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCtt > 2:1922424/1‑150 (MQ=255) ccaccaGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCttt > 1:2066892/1‑150 (MQ=255) ccaccaGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCttt < 1:2164567/150‑1 (MQ=255) caccaGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTg < 2:2194736/150‑1 (MQ=255) caGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAg < 2:1541120/150‑1 (MQ=255) tccACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCTGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCa < 1:262829/149‑1 (MQ=255) acacCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCtt > 2:2282441/1‑140 (MQ=255) acacCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCtt < 1:2282441/140‑1 (MQ=255) acCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGAACGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATAc > 2:804958/1‑150 (MQ=255) cccGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACaa < 1:1029510/150‑1 (MQ=255) cccGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACaa < 2:2257034/150‑1 (MQ=255) ctggCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAAc > 1:448862/3‑150 (MQ=255) ccGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAAc < 2:1935503/150‑1 (MQ=255) ccGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAAc < 2:1935424/150‑1 (MQ=255) ggCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCa > 1:2954/1‑150 (MQ=255) cTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGc > 2:1819262/1‑150 (MQ=255) gATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTg < 2:907042/107‑1 (MQ=255) gATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTg > 1:907042/1‑107 (MQ=255) gATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCtt < 2:1875439/126‑1 (MQ=255) gATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCtt > 1:1875439/1‑126 (MQ=255) cttttCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCa < 2:976617/147‑1 (MQ=255) gTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGa > 2:628071/1‑150 (MQ=255) ttCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGaa > 2:92269/1‑150 (MQ=255) ccGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGaaaaa > 2:14611/1‑150 (MQ=255) ccGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGaaaaa > 1:1441594/1‑150 (MQ=255) ccGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTACCAATCAAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGaaaaa > 1:25020/1‑150 (MQ=255) cGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGCTCAGCGAgacat < 2:233672/101‑5 (MQ=255) cGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGCTCAGCGAgacat > 1:233672/1‑97 (MQ=255) gctgctCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTcatcat > 2:1173189/1‑150 (MQ=255) ctCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGgc < 2:554773/90‑1 (MQ=255) ctCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGgc > 1:554773/1‑90 (MQ=255) ccTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCaa > 2:1332375/1‑150 (MQ=255) cTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAAt < 2:1518211/150‑1 (MQ=255) ttCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATg > 2:1280738/1‑150 (MQ=255) cGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACt > 1:1502252/1‑150 (MQ=255) gCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGt < 2:2066892/150‑1 (MQ=255) cTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCa > 1:1043033/1‑150 (MQ=255) cAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTc < 2:1502252/150‑1 (MQ=255) gTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCgag > 2:2120885/1‑150 (MQ=255) gTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCgag < 2:448862/150‑1 (MQ=255) aaCGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATg < 2:1271574/150‑1 (MQ=255) gggTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGcc > 1:465248/1‑150 (MQ=255) ggTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCt > 1:1728234/1‑150 (MQ=255) gTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTg < 2:25020/150‑1 (MQ=255) tAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTgg < 1:628071/150‑1 (MQ=255) tCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACg > 2:2079203/1‑150 (MQ=255) cAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACgg < 1:1173189/150‑1 (MQ=255) cAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACgg < 1:2079203/150‑1 (MQ=255) aaTGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACggg > 1:2001093/1‑150 (MQ=255) aaTGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACggg > 1:307762/1‑150 (MQ=255) ggACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAGCCACTGCGGCAGAAAAAGTCGTCATGCGTCAATGACGTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTcgc > 1:541712/1‑150 (MQ=255) aCCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCgg < 1:14611/150‑1 (MQ=255) aCCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCgg < 1:694599/150‑1 (MQ=255) gATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTa > 2:83422/1‑150 (MQ=255) ggggCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAAc < 1:92269/150‑1 (MQ=255) ggggCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCACCAttt < 2:2062789/96‑1 (MQ=255) ggggCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCACCAttt > 1:2062789/1‑96 (MQ=255) ccacTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAg < 2:1881283/80‑1 (MQ=255) ccacTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAg > 1:1881283/1‑80 (MQ=255) aCATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACgg < 2:1842012/150‑1 (MQ=255) cATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACggg < 1:1280738/150‑1 (MQ=255) aTGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGc > 1:141893/1‑150 (MQ=255) ccactcGCTGCTCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCg > 2:80325/4‑150 (MQ=255) tctcGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGAc < 1:1042546/150‑1 (MQ=255) tcGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACcg > 2:1185031/1‑150 (MQ=255) agcagcGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAgg < 2:465248/150‑1 (MQ=255) agcagcGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTACTACGGGCGACCGCGCAgg < 1:83422/150‑1 (MQ=255) | CGACCCCAGAAATGGAGGCGGCCCCACCAGCCACACCCCGGCACTCGATGTTCCCGCTATGGCTGCTCCCTTCCGGGCCTGACCAGGTTAACGGGTAATCAATGCGGGGGGACCGATGGGGCCACCACTACATGTCTCGCTGAGCAGCGAGTGGCGCCATTGTACCGGTCTTTGGAGCAGATACAACCACTGCGGCAGAAAAAGTCATCATTTCTCAATGACTTGTCAGGGTCGAGATGGCCTGGACGGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGG > NC_002947/4858422‑4858713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |