| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,872,361 | C→T | 7.1% | H231Y (CAC→TAC) | guaD → | guanine deaminase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,872,361 | 0 | C | T | 7.1% | 331.8 / 10.6 | 112 | H231Y (CAC→TAC) | guaD | guanine deaminase |
| Reads supporting (aligned to +/- strand): ref base C (60/44); new base T (6/2); total (66/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
TATGCCGAAAGCAAGGCACTGATCGAGCGCTGGCATGGCAAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACGGCGTACACCTGTGCGACGAAGA > NC_002947/4872214‑4872509 | tATGCCGAAAGCAAGGCACTGATCGAGCGCTGGCATCGCAAGGGACGCCTGCACTCAGCAGCTCCCGCTCGCCTCGCTGCAACCCGCACAGCTGAACGAGATGCCCTTGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGcac < 2:1477649/150‑1 (MQ=255) gAAAGCATGGCACTGATCGAGCGCTGGCATGGCAAGGGCCGTCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAGCCAGCACACCGGAACAATTGACCCTGGTCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCAc < 2:771796/150‑1 (MQ=255) gAAAGCAAGGCACTGATCGAGCGCTGGCATGGCAAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCAc > 2:1357890/1‑150 (MQ=255) aaaGCAAGGCACTGATCGAGCGCTGGCATGGCAAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCAcc < 1:1848015/150‑1 (MQ=255) aGGCACTGATCGAGCGCTGGCATGGCAAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCgg > 1:1791447/1‑150 (MQ=255) aCTGATCGAGCGCTGGCATGGCAAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGaaaa > 2:164126/1‑150 (MQ=255) cTGATCGAGCGCTGGCATGGCAAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAAc < 1:302751/150‑1 (MQ=255) tggcatggcaAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATc > 1:1754113/1‑150 (MQ=255) gcatggcaAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTGCATGTACACGccggg > 2:1801802/1‑122 (MQ=255) gcatggcaAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTGCATGTACACGccggg < 1:1801802/126‑5 (MQ=255) atggcaAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACt > 2:751566/1‑150 (MQ=255) atggcaAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACt > 2:89775/1‑150 (MQ=255) atggcaAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACt > 2:2222311/1‑150 (MQ=255) ggcaAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTgg < 1:2059582/150‑1 (MQ=255) ggcaAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTgg < 1:1357890/150‑1 (MQ=255) ggcaAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTgg < 1:164126/150‑1 (MQ=255) gccgccTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGt < 1:751566/150‑1 (MQ=255) ccgccTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTc < 1:1303329/150‑1 (MQ=255) cgccTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGCCCCTGGCCTGCCAATTGCCCAAGGAACACCCCGGCGTGTACCTGCCCACGCCCCTGTCGGACAACCTCAAGGAAATCGACTGCGTCAAGTcc > 2:117145/1‑149 (MQ=255) cTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTg > 1:2258833/1‑150 (MQ=255) tGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCaa > 2:1505764/1‑124 (MQ=255) cACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTc < 2:1754113/150‑1 (MQ=255) aTGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCg > 2:1408086/1‑150 (MQ=255) tGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGa < 1:1542994/150‑1 (MQ=255) aCCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCg < 2:1747281/132‑1 (MQ=255) cccGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGt > 2:1649604/1‑95 (MQ=255) cccGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGt < 1:1649604/95‑1 (MQ=255) cccGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAAc > 1:2179009/1‑103 (MQ=255) cccGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAAc < 2:2179009/103‑1 (MQ=255) cccGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCt > 1:289276/1‑132 (MQ=255) cccGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCt < 2:289276/132‑1 (MQ=255) cccGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAggg > 1:429974/1‑150 (MQ=255) cgcgCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTc > 2:418951/1‑94 (MQ=255) cgcgCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGtt > 2:1568223/1‑150 (MQ=255) ttCGCCCCAAACAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTTCATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAACTCGCTGTTCCCCGAGCAGAAGTGTGATCTg > 2:202479/1‑150 (MQ=255) tCGCCCCAACCAGCACCCCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGa < 1:922613/138‑1 (MQ=255) tCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAACCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGa > 2:922613/1‑138 (MQ=255) ccccAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTg < 2:1586220/109‑1 (MQ=255) ccccAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTg > 1:1586220/1‑109 (MQ=255) cccAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAg > 2:754345/1‑97 (MQ=255) ccAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTc > 1:1452013/1‑150 (MQ=255) gCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGCAGGGTTATCTGGACGTCTACGATc > 2:1207464/1‑150 (MQ=255) acacCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCATGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCAc > 2:1150613/1‑150 (MQ=255) acCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGt > 2:1204304/1‑99 (MQ=255) acCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGt < 1:1204304/99‑1 (MQ=255) acCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACtt > 1:2094050/1‑150 (MQ=255) cGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCg > 2:897400/1‑150 (MQ=255) gAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAg < 1:89775/150‑1 (MQ=255) aaCAATTGACCCTGGCCGGCCAATTGCTCAAGGAAGACCCCGGCGCGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGACGGGTTATCTGGACGTCTCCGATCACTGCGAgc > 1:112894/1‑150 (MQ=255) aaTTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGa < 1:709312/109‑1 (MQ=255) aaTTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGa > 2:709312/1‑109 (MQ=255) aaTTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAgctgc > 1:877281/1‑150 (MQ=255) gACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAg > 1:1575/1‑109 (MQ=255) gACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAg < 2:1575/109‑1 (MQ=255) ccTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTc < 1:1677271/85‑1 (MQ=255) ccTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTc > 2:1677271/1‑85 (MQ=255) ggccAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCg > 2:1012225/1‑150 (MQ=255) ccAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGgt < 2:1152116/150‑1 (MQ=255) aTTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAgg < 2:254887/98‑1 (MQ=255) aTTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAgg > 1:254887/1‑98 (MQ=255) ttGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGttt < 1:897400/150‑1 (MQ=255) ttGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGCACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGttt < 1:646613/150‑1 (MQ=255) tCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGccc > 1:1721695/1‑150 (MQ=255) cAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCa > 1:934563/1‑150 (MQ=255) aaGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACGGCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCAc < 1:870789/150‑1 (MQ=255) aaGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGAc > 1:366352/1‑102 (MQ=255) aaGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGAc < 2:366352/102‑1 (MQ=255) aaGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCAc > 1:363941/1‑150 (MQ=255) aaGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCACCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCAc > 1:770366/1‑150 (MQ=255) aGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAACACTAAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACg > 1:1253487/1‑150 (MQ=255) aGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACg > 1:198277/1‑150 (MQ=255) ggAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACgg < 2:1452013/150‑1 (MQ=255) ggAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCCACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACgg > 1:323545/1‑150 (MQ=255) gAACCCCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACGGc < 2:112894/150‑1 (MQ=255) gAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGc > 1:349522/1‑70 (MQ=255) gAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGc < 2:349522/70‑1 (MQ=255) gacaggtgCGTGTGCATGTACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACGGCGTa > 1:2057479/8‑150 (MQ=255) acCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGaa > 2:568019/1‑82 (MQ=255) acCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGaa < 1:568019/82‑1 (MQ=255) cccGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTc < 2:600558/108‑1 (MQ=255) cccGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTc > 1:600558/1‑108 (MQ=255) cccGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACGGCGTacac > 1:1474824/1‑150 (MQ=255) aggtgCGTGTGCATGTACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACGGCGTacac < 2:2057479/146‑1 (MQ=255) ccGGCGTGTACATGCACCCGCCCCTGTCGGAAAACCTCAAGGAAATCGACTGGGGCAAGTCGCTGTTCCCCGAGCAGAAGGGGTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGATCGGTGCTTGCCCCCGGCGTACAcc > 2:1106522/1‑150 (MQ=255) ccGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAgctgct < 1:493618/115‑1 (MQ=255) ccGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAgctgct > 2:493618/1‑115 (MQ=255) ccGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAg < 1:1905641/110‑1 (MQ=255) ccGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAg > 2:1905641/1‑110 (MQ=255) gtgCGTGTGCATGTACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGGTATCTGTACGCCGACTATCACTTCGAGCTGCTGGGCAAGCGCTCGGGGTGGGCCCACGGCGTACACCt > 2:1706166/3‑150 (MQ=255) cGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACGGCGTACACCt > 1:1585049/1‑150 (MQ=255) cGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACGGCGTACACCt > 1:17909/1‑150 (MQ=255) gtgtACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACGGCGTACACCTGTGc > 1:307635/1‑150 (MQ=255) gcATGTACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACGGCGTACACCTGTGcgacg > 2:2112064/2‑150 (MQ=255) aTGTACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACGGCGTACACCTGTGCGACGaa > 1:2135746/1‑150 (MQ=255) aTGTACACGCACCTGTCGGAAAACATCACGTAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACGGCGTACACCTGTGCGAGGaa > 1:64032/1‑150 (MQ=255) aTGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACGGCGTACACCTGTGCGACGaa > 2:1627883/1‑150 (MQ=255) tGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGGCGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGttt > 1:1765675/1‑122 (MQ=255) tGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACGGCGTACACCTGTGCGACGAag > 2:2058444/1‑150 (MQ=255) gCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACGGCGTACACCTGTGCGACGAaga < 1:1264243/150‑1 (MQ=255) gCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCGGCTGGGCGAGCGCTCGGTGTTTGCCCACGGCGTACACCTGTGCGACGAaga < 1:202479/150‑1 (MQ=255) | TATGCCGAAAGCAAGGCACTGATCGAGCGCTGGCATGGCAAGGGCCGCCTGCACTATGCAGTCACCCCGCGCTTCGCCCCAACCAGCACACCGGAACAATTGACCCTGGCCGGCCAATTGCTCAAGGAACACCCCGGCGTGTACATGCACACGCACCTGTCGGAAAACCTCAAGGAAATCGACTGGGTCAAGTCGCTGTTCCCCGAGCAGAAGGGTTATCTGGACGTCTACGATCACTTCGAGCTGCTGGGCGAGCGCTCGGTGTTTGCCCACGGCGTACACCTGTGCGACGAAGA > NC_002947/4872214‑4872509 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |