| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,917,405 | A→T | 6.3% | D24E (GAT→GAA) | ccmA ← | cytochrome c biogenesis ABC transporter ATP‑binding protein CcmA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,917,405 | 0 | A | T | 6.3% | 350.3 / 11.8 | 111 | D24E (GAT→GAA) | ccmA | cytochrome c biogenesis ABC transporter ATP‑binding protein CcmA |
| Reads supporting (aligned to +/- strand): ref base A (57/47); new base T (2/5); total (59/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.67e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
GCATGACGCTGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCAAGTCGCCCCG > NC_002947/4917256‑4917551 | gCATGACGCTGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGaaa < 1:945728/150‑1 (MQ=255)gCATGACGCTGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGaaa > 2:36227/1‑150 (MQ=255) gACGCTGTTCTGCCAGTGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGa < 1:36227/150‑1 (MQ=255) gACGCTGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGa < 1:794334/150‑1 (MQ=255) gACGCTGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGa < 1:770205/150‑1 (MQ=255) gACGCTGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGa < 2:1651605/150‑1 (MQ=255) gCTGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGATTTCGAGCt < 1:815574/150‑1 (MQ=255) tGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGATTTCGAGCTgg < 2:1087922/150‑2 (MQ=255) tGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGATTTCGAGCTgg < 2:1572591/150‑2 (MQ=255) tGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGaa < 2:550585/150‑1 (MQ=255) tGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGaa > 2:1598106/1‑150 (MQ=255) tGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGaa < 2:1975970/150‑1 (MQ=255) cAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAAcag > 2:1797963/1‑150 (MQ=255) cAGGGGCTTGCCACCCAGAAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAAcag > 2:2222658/1‑150 (MQ=255) aGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAAcagc > 2:837229/1‑150 (MQ=255) gCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCa > 2:731229/1‑150 (MQ=255) ccACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAg < 1:731229/150‑1 (MQ=255) cACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGt > 1:2305414/1‑150 (MQ=255) aCCCAGCAGAATCTGCCCGGCCGGCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTc > 1:135355/1‑150 (MQ=255) ccAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTcgc < 2:1288364/150‑1 (MQ=255) gcagAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAgg < 2:978239/137‑1 (MQ=255) gcagAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAgg > 1:978239/1‑137 (MQ=255) tCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGaa > 2:1457877/1‑124 (MQ=255) tCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGaa < 1:1457877/124‑1 (MQ=255) tCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTcgc > 2:2278482/1‑141 (MQ=255) tCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTcgc < 1:2278482/141‑1 (MQ=255) tCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGcagg > 1:2354928/1‑150 (MQ=255) gCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGcaggcca < 2:46887/150‑1 (MQ=255) cGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGTCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGcaggccaggc < 2:586715/150‑1 (MQ=255) cGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCCACATGTCGCCGGCGCCCAGGTGGAAATCTAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCcgc < 1:296230/150‑1 (MQ=255) cGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCcgc > 1:1615426/1‑150 (MQ=255) ggCTGCATCAGACAGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCGGGCCCGCGGCt < 1:1100718/150‑1 (MQ=255) gCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCgcgc > 1:980817/1‑128 (MQ=255) gCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGa < 2:1216116/150‑1 (MQ=255) cATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAg < 2:2001173/150‑1 (MQ=255) cATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAg < 1:1173352/150‑1 (MQ=255) aTCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGATTTCGAGCTgg < 2:2238057/99‑2 (MQ=255) aTCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGATTTCGAGCTgg > 1:2238057/1‑98 (MQ=255) aTCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGa < 2:186591/148‑1 (MQ=255) aTCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGa > 2:1882818/1‑148 (MQ=255) aTCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGa > 1:186591/1‑148 (MQ=255) aTCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGa < 1:1882818/148‑1 (MQ=255) aTCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATATGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAgg > 2:1878998/1‑150 (MQ=255) cAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTg < 1:1682380/150‑1 (MQ=255) aGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCcgc > 1:952085/1‑137 (MQ=255) aGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCcgc < 2:952085/137‑1 (MQ=255) cccGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGACCCGCTGGAAATGGAGGTGTTTGGCGTGCACGCCCTGGGCGCTCTCTCAGGTGACGCCCGCGTCTTGGAGTTGAAg < 2:24365/150‑1 (MQ=255) ccGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGCGGTGAAgg > 2:925924/1‑150 (MQ=255) cGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAggg > 1:913325/1‑150 (MQ=255) cAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCCTGTCTCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGcc < 1:147685/150‑1 (MQ=255) aCAGGCTGGTCCTGCGGCTGCCCTTGGGCCCCCGGATCTGCAGCATGTCGCCGGCACCCAGCTCGAAATGGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGTCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCtt < 2:904796/150‑1 (MQ=255) gCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCt > 1:579172/1‑150 (MQ=255) gTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTc < 1:837623/95‑1 (MQ=255) gTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTc > 2:837623/1‑95 (MQ=255) cTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTa < 1:278669/150‑1 (MQ=255) cTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTa < 2:1766245/150‑1 (MQ=255) cTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTa < 1:837229/150‑1 (MQ=255) ttGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAg > 1:889498/1‑150 (MQ=255) gCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAggg > 1:1619167/1‑150 (MQ=255) ccGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTa < 1:276889/146‑1 (MQ=255) ccGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTa > 2:276889/1‑146 (MQ=255) cGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGcaggccag > 2:756496/1‑97 (MQ=255) cGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGcaggccag < 1:756496/97‑1 (MQ=255) gCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCACAGCTCGAAATCGAGCTGTTCGAACATCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCtt > 2:882473/1‑150 (MQ=255) cTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCttt > 2:443689/1‑150 (MQ=255) ccGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGaa < 2:1615426/150‑1 (MQ=255) cGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAag < 2:1303649/150‑1 (MQ=255) gTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAagc < 1:886068/150‑1 (MQ=255) ccACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCGCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAac > 1:169784/1‑150 (MQ=255) cACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGa < 1:1525810/42‑1 (MQ=255) cACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAaca > 1:1134893/1‑150 (MQ=255) cACTAATCTGCGGCATTTCTCCTGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAaca > 2:1842465/1‑150 (MQ=255) aCTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGTTTTGGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAacac > 1:22698/1‑150 (MQ=255) aCTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCCGTAGGGCTTTGAAGCAGCCAacac > 2:312784/1‑150 (MQ=255) tGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCg > 2:124379/1‑150 (MQ=255) tCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAgg > 1:1097003/1‑53 (MQ=255) tGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCa > 2:762411/1‑150 (MQ=255) gcagcaTGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAg > 2:1659249/1‑150 (MQ=255) agcaTGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGaa > 2:1635601/1‑150 (MQ=255) gcaTGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCt > 2:2328885/1‑123 (MQ=255) gcaTGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCt < 1:2328885/123‑1 (MQ=255) gTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCtt < 2:1694890/150‑1 (MQ=255) cGGCGCCCAGCTCGAAACCGAGCTGTTCGAACCGCCGGTGCCAGTCGCGCTTGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGTGTCCTGGTTTCGCCTCATCTTCGGTGGTGCTTTGATGCAGTCAACCCCGCTCCAGAACCCTTGTGtc < 2:342227/150‑1 (MQ=255) gcgcCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGcc < 2:357401/95‑1 (MQ=255) gcgcCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGcc > 1:357401/1‑95 (MQ=255) gcCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCaa < 2:630962/150‑1 (MQ=255) ccAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTc > 1:1194093/1‑88 (MQ=255) ccAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTc < 2:1194093/88‑1 (MQ=255) ccAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCAAGt > 2:434259/1‑150 (MQ=255) ccAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCAAGt > 2:1922115/1‑150 (MQ=255) acAGCTCGATTTCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTtgt < 2:381728/140‑1 (MQ=255) acAGCTCGATTTCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTtgt > 1:381728/2‑141 (MQ=255) aGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGCCCAGGCCCGCGGCTTGGAGGTG‑AGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCtt > 2:1534486/1‑136 (MQ=255) aGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGCCCAGGCCCGCGGCTTGGAGGTG‑AGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCtt < 1:1534486/136‑1 (MQ=255) gCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCAAGTCGc > 1:1031464/1‑150 (MQ=255) tCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCAAGTCGccc > 2:2115455/1‑150 (MQ=255) gAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGGGCTCGCAGGCCAGGCCCGCGGCTTGGGGGTGAAGGGTCACGGTTTCGCCTTATCCTCAGTAGCGGTAGGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCAAGTCGCGCcg > 2:1874065/1‑150 (MQ=255) gAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGaa > 2:1015067/1‑106 (MQ=255) gAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGaa < 1:1015067/106‑1 (MQ=255) gAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCAAGTCGCCCcg > 2:1206426/1‑150 (MQ=255) | GCATGACGCTGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCAAGTCGCCCCG > NC_002947/4917256‑4917551 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |