| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 407,768 | A→T | 7.8% | A80A (GCT→GCA) | aceF ← | AceF‑S‑acetyldihydrolipoate |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 407,768 | 0 | A | T | 7.8% | 328.1 / 14.1 | 103 | A80A (GCT→GCA) | aceF | AceF‑S‑acetyldihydrolipoate |
| Reads supporting (aligned to +/- strand): ref base A (48/47); new base T (2/6); total (50/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.43e-01 | |||||||||||
Only 100 of 107 total aligned reads displayed.
CCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTCAGCA > NC_002947/407623‑407907 | ccGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAgcgg > 2:958900/1‑150 (MQ=255)ccGACGAACCGATGTCCGGCACGTGGATGTCCTGCAAGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGTAGCGGCTCCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAgcgg > 1:549714/1‑150 (MQ=255) cgacgaACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAgcggc > 1:1200429/1‑150 (MQ=255) gacgaACCGATGTCCGGCACGTGGATGTCCTGCCCGCTGGAAGCAGACGGCGATCTGGCCGACTGCGTTGGGACGCCCTCAGCGGCTGTCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAgcggcg < 1:550723/150‑1 (MQ=255) gacgaACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAgcggcg > 1:455189/1‑150 (MQ=255) aCCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCCGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCACCAGCGGCGCCCTc > 2:300291/1‑150 (MQ=255) aCCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCTGCTGCGGcccctga > 2:1337084/1‑147 (MQ=255) aCCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCTGCTGCGGcccctga < 1:1337084/150‑4 (MQ=255) aCCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTc < 1:218941/150‑1 (MQ=255) aCCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGC‑GCCGCTGCTgcggcccctga < 2:281691/150‑7 (MQ=255) aCCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGC‑GCCGCTGCTgcggcccctga < 2:1816949/150‑7 (MQ=255) ccGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGCGCCGCTGCTGCGGcccctga < 2:1390824/150‑4 (MQ=255) ccGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGCGCCGCTGCTGCGGcccctga < 1:489505/150‑4 (MQ=255) ccGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCg < 1:1568106/150‑1 (MQ=255) aTGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTGAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCt > 2:867529/1‑150 (MQ=255) tCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCagcagc < 1:1229577/134‑1 (MQ=255) tCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCagcagc > 2:1229577/1‑134 (MQ=255) cGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCGTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAg > 2:1930563/1‑150 (MQ=255) cACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGAc < 1:1705728/150‑1 (MQ=255) aCGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGcc < 2:201213/134‑1 (MQ=255) aCGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGcc > 1:201213/1‑134 (MQ=255) tGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGtt > 2:1277377/1‑150 (MQ=255) tCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTtcg > 2:1127586/1‑150 (MQ=255) cTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTtcgtc < 1:1174713/150‑1 (MQ=255) cTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTtcgtc < 1:1387606/150‑1 (MQ=255) gCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTtcgtcgg < 2:549714/150‑2 (MQ=255) cACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGcc > 2:1845035/1‑150 (MQ=255) cACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGcc > 2:580214/1‑150 (MQ=255) aCGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCct > 1:462880/1‑150 (MQ=255) aCGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCct > 2:1952627/1‑150 (MQ=255) ggCCGCAGCCCCGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTtcgtcg > 2:1379369/1‑142 (MQ=255) ggCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCttt < 1:1332062/150‑1 (MQ=255) gcagcaGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTc > 1:271148/1‑150 (MQ=255) cagcagCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCa < 1:524316/150‑1 (MQ=255) cagccccggCTGCTGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGc > 1:2180589/8‑150 (MQ=255) cagcCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGc < 1:1798412/150‑1 (MQ=255) catcccggCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCg < 1:2056683/144‑1 (MQ=255) agcCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCg < 2:36592/150‑1 (MQ=255) agcCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCg < 2:748756/150‑1 (MQ=255) agcCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCg < 1:1485594/150‑1 (MQ=255) agcCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCg > 1:36592/1‑150 (MQ=255) ggggCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCg > 1:577449/1‑150 (MQ=255) ggggATGCGGCAGGAGCAGCAGGAACGACTTCAGCGGCTGGCGCTTGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCCCCCTCGGCTTCCAGGACCAGCAGGTCGTCGCCTTCTTTAAggtagtgg > 2:1209228/1‑144 (MQ=255) cGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCt > 1:944553/1‑150 (MQ=255) ggAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGTG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGAcc > 1:1455534/1‑150 (MQ=255) ggAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCttt > 2:1561854/1‑128 (MQ=255) ggAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCttt < 1:1561854/128‑1 (MQ=255) gAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACcag < 1:2401177/109‑1 (MQ=255) gAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACcag > 2:2401177/1‑109 (MQ=255) gAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGa > 2:1839174/1‑96 (MQ=255) gAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGa < 1:1839174/96‑1 (MQ=255) gAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCt < 2:462880/150‑1 (MQ=255) aGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCtt < 2:2180589/150‑1 (MQ=255) aGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCtt < 1:2319654/150‑1 (MQ=255) aGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCtt < 2:1517505/150‑1 (MQ=255) aGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCCCAGCAGCCGCGCCCTCGGCTCGTAGGGCTAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCtt < 1:1497992/150‑1 (MQ=255) gCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAg < 2:1777598/119‑1 (MQ=255) gCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAg > 1:630234/1‑119 (MQ=255) gCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAg < 2:630234/119‑1 (MQ=255) gCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAg > 1:1777598/1‑119 (MQ=255) gCTTCAGCGGCTGGCGCTGTCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCCGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACGAGCTGTTCGGCGTCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGTTc > 2:880812/1‑150 (MQ=255) gCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGTG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATc < 2:1455534/150‑1 (MQ=255) aGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCa > 1:1757599/1‑134 (MQ=255) aGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCa < 2:1757599/134‑1 (MQ=255) aGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTcc > 2:1910199/1‑139 (MQ=255) aGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTcc < 1:1910199/139‑1 (MQ=255) tggcgctggcgcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGa > 2:1055102/1‑80 (MQ=255) tggcgctggcgcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGa < 1:1055102/80‑1 (MQ=255) tggcgctggcgcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCtt > 2:1359738/1‑150 (MQ=255) cgctggcgcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTggg < 2:1061428/150‑1 (MQ=255) gctggcgcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGgc > 2:2119/1‑150 (MQ=255) gccgcAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGa > 2:259797/1‑150 (MQ=255) cgcAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAAt > 1:1111483/1‑150 (MQ=255) ccGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCa < 1:2119/150‑1 (MQ=255) cGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCAt < 1:376527/150‑1 (MQ=255) ggAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGTCCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAAt < 2:177981/143‑1 (MQ=255) ggAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAAt > 1:177981/1‑143 (MQ=255) ggAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATg < 2:1146967/150‑1 (MQ=255) gcagcGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAg < 1:580214/150‑1 (MQ=255) gcagcGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAg < 1:1136426/150‑1 (MQ=255) cagcGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAgg > 1:1183768/1‑150 (MQ=255) gcagcaGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTg > 1:2226824/1‑150 (MQ=255) gcagcaGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTg > 2:1575826/1‑150 (MQ=255) agcagcCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCGGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGCTCTCGCCAGCCGTGGGCGCCGGAATTTCCATGGAGGCCTTGTc < 2:1487432/150‑1 (MQ=255) agcagcCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTc > 1:2068847/1‑150 (MQ=255) gcagcCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCg < 2:455189/150‑1 (MQ=255) gcgcCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCa < 1:1845035/150‑1 (MQ=255) gcCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAgg < 1:1277377/150‑1 (MQ=255) ccTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTc > 2:2296711/1‑124 (MQ=255) ccTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAggg < 1:1486781/150‑1 (MQ=255) ccTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCCTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTc < 1:2296711/124‑1 (MQ=255) cTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGt > 1:113151/1‑150 (MQ=255) gagggcgCCGCTGCTGCGGC‑CCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTca > 1:1627959/7‑150 (MQ=255) cAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTca < 1:259797/150‑1 (MQ=255) ggg‑gCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGGCGCACAGCTTGACCTTCAGTTCCTTGATCACGCCAGCATTGGGCGCCGGAATTTCCATGGCGGCCTTGTCGGACTCCAGGGTcagc > 1:2158378/1‑150 (MQ=255) gg‑gCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTcagca > 1:2255368/1‑150 (MQ=255) gCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTGCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAg > 1:153132/1‑123 (MQ=255) gCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAg < 2:153132/123‑1 (MQ=255) gcagcaGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCAc > 1:1960352/1‑89 (MQ=255) gcagcaGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCAc < 2:1960352/89‑1 (MQ=255) | CCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTCAGCA > NC_002947/407623‑407907 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |