| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,052,096 | G→T | 6.2% | L156M (CTG→ATG) | PP_4452 ← | NAD/NADP octopine/nopaline dehydrogenase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,052,096 | 0 | G | T | 6.2% | 300.1 / 4.5 | 94 | L156M (CTG→ATG) | PP_4452 | NAD/NADP octopine/nopaline dehydrogenase family protein |
| Reads supporting (aligned to +/- strand): ref base G (45/43); new base T (3/3); total (48/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
AATCGGAACGTGGAAAACGGCATTGGTATTATTCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGAAGATAAAGCGCCGACAACGAGCCCATTGAAC > NC_002947/5051953‑5052245 | aaTCGGAACGTGGAAAACGGCATTGGTATTATTCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCATCGCTgg < 1:1798816/150‑1 (MQ=255)aaTCGGAACGTGGAAAACGGCATTGGTATTAATCAATGTAGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCATCAATCTTTCAAGCCAGCAAGCAGGCGACGCCCAGcaagag > 2:1156610/1‑145 (MQ=255) aTCGGAACGTGGAAAACGGCATTGGTATTATTCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATggg > 2:1208359/1‑150 (MQ=255) tCGGAACGTGGAAAACGGCATTGGTATTATTCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGc > 1:2285357/1‑150 (MQ=255) tCGGAACGTGGAAAACGGCATTGGTATTATTCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGc < 1:1456565/150‑1 (MQ=255) ggAAAACGGCATTGGTATTATTCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCa > 1:890017/1‑150 (MQ=255) ggCATTGGTATTATTCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATAtt > 2:826946/1‑150 (MQ=255) aTTGGTATTATTCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGAc < 1:1877299/150‑1 (MQ=255) aTTGGTATTATTCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGAc > 2:1204225/1‑150 (MQ=255) ggTATTATTCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCtt < 1:2369726/150‑1 (MQ=255) ggTATTATTCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCtt < 2:2285357/150‑1 (MQ=255) ggTATTATTCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCtt < 1:1208359/150‑1 (MQ=255) tattatTCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGt > 1:1664472/1‑150 (MQ=255) ttCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCATCGCTGGGCgtctcct > 1:1095185/1‑122 (MQ=255) ttCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCATCGCTGGGCgtctcct < 2:1095185/128‑7 (MQ=255) ttCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTcc > 2:151970/1‑150 (MQ=255) aTGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGaaa > 2:366036/1‑150 (MQ=255) aTGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGaaa < 1:826946/150‑1 (MQ=255) aTGTCGACATCAGGGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGaaa < 2:1333696/150‑1 (MQ=255) tCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAAccc > 2:1921965/1‑150 (MQ=255) aCATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCACTTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTc < 2:1664472/150‑1 (MQ=255) aCATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTc > 2:1400506/1‑150 (MQ=255) gTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATAtt > 2:2349302/1‑121 (MQ=255) gTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATAtt < 1:2349302/121‑1 (MQ=255) tGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGt > 2:799647/1‑150 (MQ=255) ttttCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGt > 2:154371/1‑150 (MQ=255) tttCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTg < 1:1204225/150‑1 (MQ=255) cATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAg > 1:2326250/1‑150 (MQ=255) cACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGAAGCAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTtgt < 1:1738355/150‑1 (MQ=255) aCTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTtgtg < 1:799647/150‑1 (MQ=255) aCTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTtgtg < 1:366036/150‑1 (MQ=255) tACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGcc > 1:1303182/1‑150 (MQ=255) gAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTaa > 2:207650/1‑134 (MQ=255) gAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTaa < 1:207650/134‑1 (MQ=255) aTCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACt < 2:1303182/150‑1 (MQ=255) aCTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGc < 1:1003205/150‑1 (MQ=255) tACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGcga > 2:1912981/1‑150 (MQ=255) tACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGcga < 1:154371/150‑1 (MQ=255) tACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGcga > 1:143790/1‑150 (MQ=255) tACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGcga > 2:927173/1‑150 (MQ=255) ccGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGcgacg > 1:1505387/1‑150 (MQ=255) cGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGcgacga < 1:1912981/150‑1 (MQ=255) gAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTc > 1:2036641/1‑102 (MQ=255) gAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTc < 2:2036641/102‑1 (MQ=255) gAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCgacgac > 1:153986/1‑150 (MQ=255) aTAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTTGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGGCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACaa < 1:1033946/150‑1 (MQ=255) aTCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATc > 2:1913486/1‑150 (MQ=255) aTCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATc > 1:554885/1‑150 (MQ=255) tCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCt > 2:2315977/1‑150 (MQ=255) cTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTtgt > 1:299426/1‑122 (MQ=255) cTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTtgt < 2:299426/122‑1 (MQ=255) cTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGcgac < 1:1146030/137‑1 (MQ=255) cTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGcgac > 2:1146030/1‑137 (MQ=255) gCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTAcccc > 1:2263252/1‑150 (MQ=255) cATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTAccccc < 1:1913486/150‑1 (MQ=255) atatACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGc > 2:1154963/1‑65 (MQ=255) atatACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGc < 1:1154963/65‑1 (MQ=255) tataCGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAg < 2:2263252/150‑1 (MQ=255) cGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTc < 1:1921965/150‑1 (MQ=255) gcgcATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTg < 2:1016116/68‑1 (MQ=255) gcgcATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTg > 1:1016116/1‑68 (MQ=255) gcATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTcgcg > 2:2065015/1‑150 (MQ=255) aTCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCt > 2:2254361/1‑73 (MQ=255) aTCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCt < 1:2254361/73‑1 (MQ=255) aTCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGt < 1:1751841/97‑1 (MQ=255) aTCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGt > 2:1751841/1‑97 (MQ=255) ttCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTc > 2:1592538/1‑150 (MQ=255) ttCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTc > 1:2187672/1‑150 (MQ=255) ttCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTc > 2:1766647/1‑150 (MQ=255) tCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTcc > 1:141547/1‑150 (MQ=255) tCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTcc < 1:1766647/150‑1 (MQ=255) tCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATACGCGAAACAGCATGAAATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTcc > 1:1025585/1‑150 (MQ=255) tttttGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGTCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAACATCTACCCCCAGGTTCCTCGCGCGCTCCCGaa < 1:822739/150‑1 (MQ=255) tttttGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCgg > 2:959595/1‑84 (MQ=255) tttttGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCgg < 1:959595/84‑1 (MQ=255) tttttGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGaa < 1:1400506/150‑1 (MQ=255) tttGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGAAGa < 1:2065015/150‑1 (MQ=255) gAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGaaa < 1:2089233/67‑1 (MQ=255) gAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGaaa > 2:2089233/1‑67 (MQ=255) aaGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGAAGATaaa < 2:2187672/150‑1 (MQ=255) tGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGAAGATAAAgcgc > 2:1688917/1‑150 (MQ=255) cAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGAAGATAAAGCGCCGa < 2:143790/150‑1 (MQ=255) aaGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGAAGATAAAGCGCCGAc > 1:196573/1‑150 (MQ=255) gCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTcgctc < 2:115620/125‑3 (MQ=255) gCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTcgctc > 1:115620/1‑123 (MQ=255) cAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGAAGATAAAGCGCCGACAAc < 2:890017/150‑1 (MQ=255) tgcgtcGCCCATCGCTGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGAAGATAAAGCGCCGACAAc > 1:293412/6‑148 (MQ=255) tgcgtcGCCCATCGCTGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGAAGATAAAGCGCCGACAAc < 2:293412/143‑1 (MQ=255) ggAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGAAGATAAAGCGCCGACAACGa < 1:1795680/150‑1 (MQ=255) gtcGCCCATCGCTGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGAAGATAAAGCGCCGACAACGAGcc > 2:1512641/3‑150 (MQ=255) gaCGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTAc < 1:33113/102‑1 (MQ=255) gaCGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTAc > 2:33113/1‑102 (MQ=255) cccAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGAAGATAAAGCGCCGACAACGAGCCCAtt < 1:2315977/150‑1 (MQ=255) aGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGAAGATAAAGCGCCGACAACGAGCCCATTGaa < 2:153986/150‑1 (MQ=255) gCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGGGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGAAGATAAATCGCCGACAACGAGCCCATTGAAc < 2:554885/150‑1 (MQ=255) | AATCGGAACGTGGAAAACGGCATTGGTATTATTCAATGTCGACATCAGTGGGTTTTCATCCACTACGAAATCACTACCGAATAAATCACTGCATATACGCTGCGCATCTTCAATTTTTGAAGCTGGCAAGCAGGAGACGCCCAGCGATGGGCGACGCACCATGATATTGACCTTGTCTTCCGAAACCCTTCGTGCGGTAAGTGCAGTTGTGCCAAAACTGGCGACGACAAGATCTACCCCCAGGTTCCTCGCGCGCTCCCGAAGATAAAGCGCCGACAACGAGCCCATTGAAC > NC_002947/5051953‑5052245 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |