| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 416,124 | G→C | 8.1% | D297H (GAC→CAC) | waaC → | ADP‑heptose‑‑LPS heptosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 416,124 | 0 | G | C | 8.1% | 338.5 / 15.1 | 110 | D297H (GAC→CAC) | waaC | ADP‑heptose‑‑LPS heptosyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (51/50); new base C (4/5); total (55/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.60e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
TTCTGGCGGCGGCAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAGCGCGTTG > NC_002947/415975‑416270 | ttCTGGCGGCGGCAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCCGTg > 1:526058/1‑150 (MQ=255)ttCTGGCGGCGGCAAAGGCCTGCGACGCGGTCGCTAACGGCATTGGCCAGCTGGCGGCCGAACTCTATATACCCACCCTTTCGCAGTTTGGCCCTACCAACCCGGGCCTGCCTGGCGCCTACAGACGGCCCCCGATTCACCAGGCCAGTg > 2:883057/1‑150 (MQ=255)ttCTGGCGGCGACAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATGCACCAGGCCAGTg > 2:692711/1‑150 (MQ=255) ggcggcggcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTg < 1:1312280/150‑1 (MQ=255) gcggcggcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTgg < 1:401397/150‑1 (MQ=255) cggcggcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGc > 2:1213951/1‑150 (MQ=255) gcggcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCt > 2:1316283/1‑150 (MQ=255) ggcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACAAGGCCAGTCACTGGCCtgg < 2:285094/150‑3 (MQ=255) gcAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCTGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTCACTGGCCtggt < 2:820829/150‑4 (MQ=255) cAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCATCTTTTGTGCAATTGCGGGAAGGGAAGCGCGAGCAACTGGTGCTGGCGGATGGACTCAGATTCACCAGGCCAGTGACTGGCCTTgcg < 2:1479265/150‑1 (MQ=255) aaaGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTgcgc > 1:1757087/1‑150 (MQ=255) aaGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGAGGGACCCAGATGCACCAGGCCAGTGACTGGCTTTtcgcc > 1:1108844/1‑149 (MQ=255) ggCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTcc < 1:1797496/150‑1 (MQ=255) ggCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTcc > 1:1665507/1‑150 (MQ=255) gTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcctgcctg > 1:1029424/1‑150 (MQ=255) gTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcctgcctg > 1:1131064/1‑150 (MQ=255) gTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcctgcctg > 2:596761/1‑150 (MQ=255) ggCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGGTTCACCAGGCCAGTGACTGGCCTTGCGCTCcctgcctgag > 1:519460/1‑148 (MQ=255) cGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCaga < 1:1803217/150‑1 (MQ=255) cGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAgaagaa < 1:823006/150‑1 (MQ=255) cGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAgaagaa < 1:2212627/150‑1 (MQ=255) gATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGaagaag < 1:596761/150‑1 (MQ=255) aTACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGt > 2:1284689/1‑150 (MQ=255) tACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGCTTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTg < 1:2115099/150‑1 (MQ=255) tACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTg > 1:1334830/1‑150 (MQ=255) cGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCAc > 1:1647854/1‑150 (MQ=255) cGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCAc > 1:1074618/1‑150 (MQ=255) cGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCAc < 2:1535212/150‑1 (MQ=255) gCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCt > 2:2179424/1‑150 (MQ=255) gCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGAACCAGATTCACAAAGCCATGGACTTGCCTGTCGCTCCCTGCCTGCCGAAGCCGTGCGccc > 2:396672/1‑149 (MQ=255) gCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGCCTGGCGCATCCGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAAc < 1:2099036/150‑1 (MQ=255) gCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTgcg < 2:537768/117‑1 (MQ=255) gCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTgcg > 1:537768/1‑117 (MQ=255) ggcggcggcACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAgcgc < 1:1284689/150‑1 (MQ=255) ggcggcACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACACAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGa < 2:1665507/150‑1 (MQ=255) gcggcACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGTTTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGAt < 2:196369/150‑1 (MQ=255) gcACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTgtgaa > 1:1254799/1‑101 (MQ=255) gcACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTgtgaa < 2:1254799/105‑5 (MQ=255) gcACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGAc > 2:1486730/1‑150 (MQ=255) cTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTg > 1:2320831/1‑150 (MQ=255) cTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCCCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTg > 1:314814/1‑150 (MQ=255) tCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcctgcct > 1:933824/1‑109 (MQ=255) tCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcctgcct < 2:933824/109‑1 (MQ=255) cGATGTGCCTACCCTTTCGCTGTTTGGCCCTACCACCCCGCGCCTGACTGGCGCCTACGGACGGACCCAGATTAACCAGGCCAGTGCCTGGACTTGAGATCCCTGACTGCAGCCGAAGTGCACCTCCATCCTGATCTCCTATGGCCTGGc < 2:703061/150‑1 (MQ=255) gATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGcc < 2:1029424/150‑1 (MQ=255) gATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTCACTGGCCtggt < 1:1217268/96‑4 (MQ=255) gATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTCACTGGCCtggt > 2:1217268/1‑93 (MQ=255) gtgCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCgg < 1:1052744/150‑1 (MQ=255) tgCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCCGGCCAGTGACTGGCCTTGCGCTTCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGt < 2:2082127/150‑1 (MQ=255) gCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGtt < 2:1037156/150‑1 (MQ=255) ccACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTgg > 2:746808/1‑141 (MQ=255) cACCCTTTCGCTGTTTGGCTCTACCAACCCGTGCCTGACTGGCTCGAACTTACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTTCCTGCAGAAGAAGTTCACCTTCTAACCGAGCTCCGATGACCTGGCCCGGTTCGa > 2:341643/1‑150 (MQ=255) cACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGa < 1:1005217/150‑1 (MQ=255) cACCCTTTCGCTGCTTGGCCCTACCACCCCGGGCCTGACTGGCGCCTACGGACGCCGCCAGATTCACCAGGCCAGTCACTGGCCTCGCGCTCCCCGCCTGCAGAAGAAGTGAACCCACACGCCGCGCGCCGCTGACCTCGCCCGGCTcca > 2:128404/1‑148 (MQ=255) cccTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATc < 1:1078440/150‑1 (MQ=255) tttCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGACGTGGACCTCCACACCGAGCGCCGATGACCTGGCCAGCTTctgcttga < 2:31735/150‑8 (MQ=255) gTTTTGCCCTACCAACCCGGGCCGGACTGGCGCCTACGGACGGACCCAGATTCCCCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAATCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGa < 1:2300629/150‑1 (MQ=255) tttGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTa < 2:1608047/104‑1 (MQ=255) tttGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTa > 1:1608047/1‑104 (MQ=255) gtGGCGCTAGCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTNCAAACCGAGCGCCGATGANCTGGCCCGGTTCGATCTGAAACGCGAgn < 1:128404/149‑2 (MQ=255) tACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAAcc < 1:2224983/102‑1 (MQ=255) tACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAAcc > 2:2224983/1‑102 (MQ=255) aCCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcct > 2:519182/1‑73 (MQ=255) aCCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcct < 1:519182/73‑1 (MQ=255) aCCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCtt > 2:2157858/1‑149 (MQ=255) tggtagggCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGc < 1:1714675/145‑1 (MQ=255) aaCCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCTCTGTGc < 1:196437/150‑1 (MQ=255) aaCCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGc < 1:1877409/150‑1 (MQ=255) aaCCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTCACTGGcc < 2:1714501/59‑1 (MQ=255) aaCCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTCACTGGcc > 1:1714501/1‑59 (MQ=255) ccGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcctgc < 2:370358/69‑1 (MQ=255) ccGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCcctgc > 1:370358/1‑69 (MQ=255) ccGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGGGGCCGCTGTGCTTc > 2:1947823/1‑150 (MQ=255) ccTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCg > 2:362991/1‑150 (MQ=255) cTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAgaagaa > 1:1299841/1‑74 (MQ=255) cTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAgaagaa < 2:1299841/74‑1 (MQ=255) cTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGc > 2:551357/1‑150 (MQ=255) taCTGGCGCCTACGGACGGACCCACATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCTCTGTGCTTCACTCGCCt < 1:626387/149‑1 (MQ=255) gACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCt > 1:2123422/1‑150 (MQ=255) gACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCt < 1:1316283/150‑1 (MQ=255) tGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCATTGCGCTCCCTGCCTGCAGAAGAAGTGCAACTACAAACCGAGCGCCGATGACCTGGCCCAGTTAGATCTGAAACGCGAGTGTCCGCGTTTCTTCACTCGCCTGaa > 2:416099/1‑150 (MQ=255) gcCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATccc > 2:649297/1‑150 (MQ=255) cTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCAGCTGTGCTTCACTCGCCTGAATCCCGa < 2:1108844/150‑1 (MQ=255) tACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGc > 1:1970568/1‑129 (MQ=255) tACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGc < 2:1970568/129‑1 (MQ=255) tACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAg > 1:582715/1‑150 (MQ=255) gacggacCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCGCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCGGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCAtt > 2:1063794/1‑149 (MQ=255) acggacCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGaaa < 1:809738/106‑1 (MQ=255) acggacCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGaaa > 2:809738/1‑106 (MQ=255) ggacCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTgg < 2:582715/150‑1 (MQ=255) gATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCg > 2:1663914/1‑150 (MQ=255) gcaaGGCCAGTCACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCATCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAg < 1:2401297/128‑1 (MQ=255) gcaaGGCCAGTCACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCATCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAg > 2:2401297/4‑131 (MQ=255) cAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGGTCTGAAACGCGAGTGGCCGCTGGGCTTCACTCGCCCGAATCCCGAGCATGTGGCGAGCCGCTTGAgc > 2:820445/1‑150 (MQ=255) cAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAgc < 2:526058/150‑1 (MQ=255) cAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAgc > 1:966214/1‑150 (MQ=255) aGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAgcg > 1:2127924/1‑150 (MQ=255) ggCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGcc > 2:1537008/1‑140 (MQ=255) ccAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAGCGCGt < 1:692711/150‑1 (MQ=255) aGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATATGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAGCGCGTtg > 1:1135058/1‑150 (MQ=255) | TTCTGGCGGCGGCAAAGGCCTGCGTGGCGGTCGATACCGGCCTTGGCCACCTGGCGGCGGCACTCGATGTGCCCACCCTTTCGCTGTTTGGCCCTACCAACCCGGGCCTGACTGGCGCCTACGGACGGACCCAGATTCACCAGGCCAGTGACTGGCCTTGCGCTCCCTGCCTGCAGAAGAAGTGCACCTACAAACCGAGCGCCGATGACCTGGCCCGGTTCGATCTGAAACGCGAGTGGCCGCTGTGCTTCACTCGCCTGAATCCCGAGCATGTGGCGAGCCGCTTGAGCGCGTTG > NC_002947/415975‑416270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |