| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,077,282 | G→T | 5.7% | intergenic (+29/+79) | PP_4470 → / ← mgtE | Arc domain‑containing transcriptional regulator/magnesium transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,077,282 | 0 | G | T | 5.7% | 456.7 / 10.5 | 142 | intergenic (+29/+79) | PP_4470/mgtE | Arc domain‑containing transcriptional regulator/magnesium transporter |
| Reads supporting (aligned to +/- strand): ref base G (63/69); new base T (4/4); total (67/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.34e-01 | |||||||||||
Only 100 of 143 total aligned reads displayed.
TGAACTGTCCCTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATC > NC_002947/5077133‑5077430 | tGAACTGTCCCTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCg < 1:833143/150‑1 (MQ=255) cTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTgg > 1:368015/1‑148 (MQ=255) cTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCt > 1:1951127/1‑150 (MQ=255) tGCATGAGCGCGAGTTGCTGCAGCTTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCTTACGCTGGCtt < 1:1846124/150‑1 (MQ=255) tGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCATCCTGAGATCTGCAGCGAACACTTAAAAGCGAGCGTAAGCTGGCtt > 2:395409/1‑150 (MQ=255) cATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCtttt < 1:717356/150‑1 (MQ=255) tGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACAAAAAAGCCAGCTTACGCTGGCttt > 2:1707656/1‑147 (MQ=255) cgcgAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTgg < 2:2075626/150‑1 (MQ=255) cgcgAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTGGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTgg > 2:338612/1‑150 (MQ=255) tgcAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACt > 2:463684/1‑150 (MQ=255) tgcAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACt < 1:176416/150‑1 (MQ=255) tgcAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACt > 1:1729459/1‑150 (MQ=255) aGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGgc > 1:274004/1‑150 (MQ=255) gCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGgca < 2:1902543/150‑1 (MQ=255) tttCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGgcagca > 2:793143/1‑150 (MQ=255) tCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAg > 1:1897242‑M2/1‑149 (MQ=255) gCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGGCGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggcc < 2:2096340‑M2/150‑5 (MQ=255) gCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggcc < 1:1893355‑M2/150‑5 (MQ=255) aaCTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggccatt < 2:2171858‑M2/150‑8 (MQ=255) ccACCGCCAGCAGAACGTCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGc > 2:874635/1‑150 (MQ=255) ccACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGc > 2:1567129/1‑150 (MQ=255) ccACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCGGGCGTTTTTTTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTgg > 1:1515677/1‑149 (MQ=255) cACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCg > 2:2177263/1‑150 (MQ=255) cACCGCCAGCAGAACGCCTTGGTCGCCCTCAATGTTCTCTTTGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCg < 2:1998747/150‑1 (MQ=255) aCCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCgg > 2:86215/1‑150 (MQ=255) aCCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCgg < 1:86215/150‑1 (MQ=255) aCCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCgg < 1:939971/150‑1 (MQ=255) aCCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTACGAGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCgg > 1:737754/1‑150 (MQ=255) gcGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCggg > 2:1424986/2‑150 (MQ=255) gCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGAt > 1:1756115/1‑150 (MQ=255) ccAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCt > 2:963087/1‑142 (MQ=255) ccAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCt < 1:963087/142‑1 (MQ=255) gcagAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTccc < 2:544417/138‑1 (MQ=255) gcagAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGAGCGCAATACTGGCATCAAGGCCATTTCCCTGCGGGATTGtt > 2:1398003/1‑150 (MQ=255) cagAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGACCATTTCCCTGCGGGATTGTTc < 2:1142282/150‑1 (MQ=255) gAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCCCCTGAGGGCTGCAGCCAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTATGGCCTGCAGCCAGCCCATTTCCTTGCGGTATTGTTccc < 2:1997953/150‑1 (MQ=255) cTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTgg < 2:515207/100‑1 (MQ=255) cTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTgg > 1:515207/1‑100 (MQ=255) ttGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGgga < 2:1951127/150‑1 (MQ=255) ttGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGgga < 1:9871/150‑1 (MQ=255) ttGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGgga < 1:2177263/150‑1 (MQ=255) gTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCCGCGAACACGAAAAAGCCACCGTAAGCTGTCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGggagga < 2:1478450/150‑1 (MQ=255) gCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTg < 1:174448/150‑1 (MQ=255) ccTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTgga > 2:1101082/1‑149 (MQ=255) ccTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGc < 1:463684/150‑1 (MQ=255) cTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGa < 1:2314120/98‑1 (MQ=255) cTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGa > 2:2314120/1‑98 (MQ=255) cTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCt > 2:663498/1‑150 (MQ=255) aTCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGggagga < 1:644609/141‑1 (MQ=255) gCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaac > 1:1939321/1‑150 (MQ=255) gtCACGACGTGGAAATGGCCGCAGACGCCTCCAGACGGCTGCAGCGAACACTAAAAAGCCAGCATAAGCTGGCTTTTTTGTCGGCGTCTGACTGTCAGCAAGGCCATTTCTCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaaca < 2:250202/149‑1 (MQ=255) cTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGt > 1:488757/1‑87 (MQ=255) tCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGTGGGaacaat < 1:247150/123‑6 (MQ=255) tCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAg < 1:1401920/150‑1 (MQ=255) cGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGaa < 1:511368/150‑1 (MQ=255) gATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGAtt > 2:1884457/1‑116 (MQ=255) gATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGAtt < 1:1884457/116‑1 (MQ=255) gATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAAc < 1:1424986/150‑1 (MQ=255) gATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAAc < 1:793143/150‑1 (MQ=255) ggAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaa > 2:2402628/1‑138 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGgca > 2:954000/1‑86 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggccatttccacatcgtgagcgatgagggcgaccaaggcgttctgctggcggtgggacag < 1:1026566‑M2/150‑61 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaaca < 2:382322/139‑1 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaaca > 1:382322/1‑139 (MQ=255) aaaTGGGCGCAGACGCCTCTTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCACCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTgg > 2:1080375/1‑150 (MQ=255) aaaTGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTgg > 2:350292/1‑150 (MQ=255) aaTGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGc > 1:2111890/1‑150 (MQ=255) caggcGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCaa < 1:2096340/146‑1 (MQ=255) aGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATGTCCCTTCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAg < 2:274004/150‑1 (MQ=255) cGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGaa < 2:417866/150‑1 (MQ=255) gCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAg > 1:244992/1‑150 (MQ=255) cctcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGa < 1:886695/150‑1 (MQ=255) cctcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGa < 2:2214364/150‑1 (MQ=255) ctcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGAt < 1:663498/150‑1 (MQ=255) ctcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGAt > 2:1149526/1‑150 (MQ=255) tcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGAt > 1:1143904/1‑149 (MQ=255) tcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTAGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATg > 2:1228160/1‑150 (MQ=255) cctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATga < 1:338612/150‑1 (MQ=255) cctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATga < 2:1756115/150‑1 (MQ=255) ctGAGGGCTTCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAg < 1:1113841/120‑1 (MQ=255) ctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaa < 1:2171858/150‑1 (MQ=255) ctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaa < 1:1101082/150‑1 (MQ=255) ctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaa < 1:1530524/150‑1 (MQ=255) ctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTAGCTGCCGGCTTGTTCCCACAGGGAGGATTGGCTTAAAACAGGTACAGCGTGGCCAGCCCAAGGAAGATgaa > 1:1021161/1‑150 (MQ=255) gCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGc > 1:1127805/1‑102 (MQ=255) gCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGc < 2:1127805/102‑1 (MQ=255) gCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCt < 1:1567129/150‑1 (MQ=255) cGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTg > 2:1400247/1‑150 (MQ=255) cGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTg > 2:1663893/1‑150 (MQ=255) cacaAAAAAGCCAGCTTACGCTGGCTTTTTCGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCgg > 2:123857/1‑150 (MQ=255) acGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGt > 2:2287326/1‑150 (MQ=255) gAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGc > 1:256121/1‑112 (MQ=255) gAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGc < 2:256121/112‑1 (MQ=255) aGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGACGAAGAAACCACCGCTGTCGGTCAcagca < 2:503872/150‑1 (MQ=255) ccAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggccatttccacatcgtgagcgatgagggcgaccaaggcgttctgctggcggtgggacagttggcggaaacgctgcagcaactcgcgctcatgcagggacagttcag > 2:1026566‑M2/1‑43 (MQ=255) ccAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGt > 2:2390352/1‑150 (MQ=255) cAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTg > 2:2122349/1‑102 (MQ=255) cAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTg < 1:404507/150‑1 (MQ=255) ggcGTGAGCTGGCTTTTTTGGGGGCGTCTGACTGGCAGCAAggccatttccacatcgtgagcgatgagggcgaccaaggcgttctgctggcggtgggacagttggcggaaacgctgcagcaactcgcgctcatgcagggacagttcaggg > 1:2369970‑M2/2‑41 (MQ=255) cGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGatc > 1:1001326/1‑150 (MQ=255) | TGAACTGTCCCTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATC > NC_002947/5077133‑5077430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |