| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,077,285 | A→C | 5.6% | intergenic (+32/+76) | PP_4470 → / ← mgtE | Arc domain‑containing transcriptional regulator/magnesium transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,077,285 | 0 | A | C | 5.6% | 420.2 / 12.3 | 142 | intergenic (+32/+76) | PP_4470/mgtE | Arc domain‑containing transcriptional regulator/magnesium transporter |
| Reads supporting (aligned to +/- strand): ref base A (63/71); new base C (4/4); total (67/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01 | |||||||||||
Only 100 of 142 total aligned reads displayed.
TGTCCCTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATC > NC_002947/5077138‑5077430 | cTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTgg < 2:368015/148‑1 (MQ=255) tGCATGAGCGCGAGTTGCTGCAGCTTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCTTACGCTGGCtt < 1:1846124/150‑1 (MQ=255) tGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCATCCTGAGATCTGCAGCGAACACTTAAAAGCGAGCGTAAGCTGGCtt > 2:395409/1‑150 (MQ=255) gCATGAGCGCGAGTCGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCTTACGCTGGCttt < 2:1259060/150‑1 (MQ=255) cgcgAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTGGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTgg > 2:338612/1‑150 (MQ=255) gTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTc < 1:1895664/150‑1 (MQ=255) ttGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCt > 1:793761/1‑150 (MQ=255) tgcAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACt > 2:463684/1‑150 (MQ=255) tgcAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACt < 1:176416/150‑1 (MQ=255) tgcAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACt > 1:1729459/1‑150 (MQ=255) aGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGgc > 1:274004/1‑150 (MQ=255) gCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGgca < 2:1902543/150‑1 (MQ=255) gTTTCCGCCAACTGTCCTACAGCCAGCAGAACGGCATGGTCGGTGTCGGACTTGACGGAAACGAGATAGAAGCGGACTTCGCCTGGGGGGTGGAGCGGAGACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGgcagc > 2:2081279/1‑150 (MQ=255) tttCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGgcagca > 2:793143/1‑150 (MQ=255) gCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGGCGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggcc < 2:2096340‑M2/150‑5 (MQ=255) gCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggcc < 1:1893355‑M2/150‑5 (MQ=255) gCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggcc < 2:1530524‑M2/150‑5 (MQ=255) aaCTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggccatt < 2:2171858‑M2/150‑8 (MQ=255) ccACCGCCAGCAGAACGTCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGc > 2:874635/1‑150 (MQ=255) ccACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGc > 2:1567129/1‑150 (MQ=255) ccACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGc > 1:2214364/1‑150 (MQ=255) ccACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCGGGCGTTTTTTTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTgg > 1:1515677/1‑149 (MQ=255) cACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCg > 2:2177263/1‑150 (MQ=255) cACCGCCAGCAGAACGCCTTGGTCGCCCTCAATGTTCTCTTTGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCg < 2:1998747/150‑1 (MQ=255) aCCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCgg > 2:86215/1‑150 (MQ=255) aCCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTACGAGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCgg > 1:737754/1‑150 (MQ=255) gcGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCggg > 2:1424986/2‑150 (MQ=255) ccAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCt < 1:963087/142‑1 (MQ=255) ccAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCt > 2:963087/1‑142 (MQ=255) gcagAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTccc > 1:544417/1‑138 (MQ=255) gcagAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGtt > 2:1401920/1‑150 (MQ=255) gcagAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGAGCGCAATACTGGCATCAAGGCCATTTCCCTGCGGGATTGtt > 2:1398003/1‑150 (MQ=255) gAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCCCCTGAGGGCTGCAGCCAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTATGGCCTGCAGCCAGCCCATTTCCTTGCGGTATTGTTccc < 2:1997953/150‑1 (MQ=255) ccTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAgg < 1:712231/150‑1 (MQ=255) cTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTgg < 2:515207/100‑1 (MQ=255) cTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTgg > 1:515207/1‑100 (MQ=255) ttGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGgga < 1:2177263/150‑1 (MQ=255) ttGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGgga < 2:1951127/150‑1 (MQ=255) gCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTg < 1:174448/150‑1 (MQ=255) cccTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTgg < 2:1040714/150‑1 (MQ=255) ccTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGc < 1:463684/150‑1 (MQ=255) cTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCt > 2:663498/1‑150 (MQ=255) aTCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGggagga > 2:644609/1‑141 (MQ=255) gCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaac > 1:1939321/1‑150 (MQ=255) gtCACGACGTGGAAATGGCCGCAGACGCCTCCAGACGGCTGCAGCGAACACTAAAAAGCCAGCATAAGCTGGCTTTTTTGTCGGCGTCTGACTGTCAGCAAGGCCATTTCTCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaaca < 2:250202/149‑1 (MQ=255) cTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGt > 1:488757/1‑87 (MQ=255) tCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGTGGGaacaat > 2:247150/1‑118 (MQ=255) tCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGTGGGaacaat < 1:247150/123‑6 (MQ=255) tCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAg > 1:1747155/1‑150 (MQ=255) gATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGAtt < 1:1884457/116‑1 (MQ=255) gATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAAc < 1:793143/150‑1 (MQ=255) gATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAAc < 1:1424986/150‑1 (MQ=255) ggAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaa < 1:2402628/138‑1 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGgca < 1:954000/86‑1 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGgca > 2:954000/1‑86 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggccatttccacatcgtgagcgatgagggcgaccaaggcgttctgctggcggtgggacag < 1:1026566‑M2/150‑61 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaaca < 2:382322/139‑1 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaaca > 1:382322/1‑139 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTg < 2:1747155/150‑1 (MQ=255) aaaTGGGCGCAGACGCCTCTTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCACCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTgg > 2:1080375/1‑150 (MQ=255) aaTGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGc > 1:2111890/1‑150 (MQ=255) tGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCa < 1:874635/150‑1 (MQ=255) cGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggccatttccacatcgtcagccatgagggcgaccaaggcgttctgctcgcggtgggacagttggcggc < 2:2369970‑M2/150‑69 (MQ=255) caggcGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCaa < 1:2096340/146‑1 (MQ=255) aGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATGTCCCTTCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAg < 2:274004/150‑1 (MQ=255) cGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGaa < 2:417866/150‑1 (MQ=255) cGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGaa < 2:1893355/150‑1 (MQ=255) cctcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGa < 1:886695/150‑1 (MQ=255) cctcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGa < 2:2214364/150‑1 (MQ=255) ctcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGAt > 2:1149526/1‑150 (MQ=255) ctcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGAt < 1:663498/150‑1 (MQ=255) tcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGAt < 2:1143904/149‑1 (MQ=255) tcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGAt > 1:1143904/1‑149 (MQ=255) tcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTAGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATg > 2:1228160/1‑150 (MQ=255) cctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATga < 2:1756115/150‑1 (MQ=255) cctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATga < 1:338612/150‑1 (MQ=255) ctGAGGGCTTCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAg > 2:1113841/1‑120 (MQ=255) ctGAGGGCTTCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAg < 1:1113841/120‑1 (MQ=255) ctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaa < 1:1530524/150‑1 (MQ=255) ctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaa < 1:1101082/150‑1 (MQ=255) ctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaa < 1:2171858/150‑1 (MQ=255) ctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTAGCTGCCGGCTTGTTCCCACAGGGAGGATTGGCTTAAAACAGGTACAGCGTGGCCAGCCCAAGGAAGATgaa > 1:1021161/1‑150 (MQ=255) ggCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAac < 1:1149526/150‑1 (MQ=255) gCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGc < 2:1127805/102‑1 (MQ=255) gCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGc > 1:1127805/1‑102 (MQ=255) gCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCt < 1:1567129/150‑1 (MQ=255) gCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGACGAAGAAACCACCGCt > 1:503872/1‑150 (MQ=255) cGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTg > 2:1663893/1‑150 (MQ=255) acacGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGACCAAGGAAGATGAAGAAACCACCGCTGTCg < 1:350292/150‑1 (MQ=255) acGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGt > 2:2287326/1‑150 (MQ=255) gAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGc < 2:256121/112‑1 (MQ=255) gAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGc > 1:256121/1‑112 (MQ=255) aaaaaGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCACTTCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTcac > 2:2133796/1‑150 (MQ=255) aGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCTAAGGAAGATGAAGAAACCACCGCTGTCGGTCAcagca < 1:1945474/150‑1 (MQ=255) aGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGACGAAGAAACCACCGCTGTCGGTCAcagca < 2:503872/150‑1 (MQ=255) ccAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggccatttccacatcgtgagcgatgagggcgaccaaggcgttctgctggcggtgggacagttggcggaaacgctgcagcaactcgcgctcatgcagggacagttcag > 2:1026566‑M2/1‑43 (MQ=255) ccAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGt > 2:2390352/1‑150 (MQ=255) ggcGTGAGCTGGCTTTTTTGGGGGCGTCTGACTGGCAGCAAggccatttccacatcgtgagcgatgagggcgaccaaggcgttctgctggcggtgggacagttggcggaaacgctgcagcaactcgcgctcatgcagggacagttcaggg > 1:2369970‑M2/2‑41 (MQ=255) cGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCTATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGatc < 1:395409/150‑1 (MQ=255) cGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGatc > 1:1001326/1‑150 (MQ=255) | TGTCCCTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATC > NC_002947/5077138‑5077430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |