| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,105,711 | T→C | 7.1% | S817G (AGC→GGC) | ydiJ ← | putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,105,711 | 0 | T | C | 7.1% | 436.1 / 13.4 | 148 | S817G (AGC→GGC) | ydiJ | putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (62/75); new base C (7/4); total (69/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 153 total aligned reads displayed.
CTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCC > NC_002947/5105562‑5105859 | cTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCt > 2:1868273/1‑150 (MQ=255)cTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCt > 2:1034895/1‑150 (MQ=255)cTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCt > 2:1252480/1‑150 (MQ=255) tGGCGATACACCAGCGTCATCGCCGGGTCCCGCCACCCACGCAGCACTTCG‑TCGCGGCCATCCTCCGTGAGTCGCTAGGCGTTGCGGATCGCTGCCTTTGCAAACCCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTg > 1:44886/1‑150 (MQ=255) tGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTg > 2:157952/1‑150 (MQ=255) tACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCGA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGACACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGgc < 1:2303991/150‑1 (MQ=255) acacCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGgc‑g < 1:1868273/150‑1 (MQ=255) cAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAg > 1:890490/1‑150 (MQ=255) aGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAACCCCTGTACGTGCAACGGCTTGCCGTTGGCGCCGTACGCC‑GCCAgg > 1:1015068/1‑150 (MQ=255) gCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGa > 1:1257383/1‑150 (MQ=255) tCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATa > 2:1744623/1‑150 (MQ=255) tCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGa < 2:1798701/144‑1 (MQ=255) tCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGa > 1:1798701/1‑144 (MQ=255) tCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCCGTACAGC‑GCCaa > 1:953724/1‑141 (MQ=255) tCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCCGTACAGC‑GCCaa < 2:953724/142‑2 (MQ=255) gCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCgg < 2:1363558/150‑1 (MQ=255) gggTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTgg < 2:2104218/150‑1 (MQ=255) gggTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTgg < 1:393748/150‑1 (MQ=255) tCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGccc > 1:2167651/1‑150 (MQ=255) cAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAg > 2:962615/1‑150 (MQ=255) ccaccaGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGt < 1:1215236/150‑1 (MQ=255) ccaccaGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGt < 2:1691032/150‑1 (MQ=255) ccaccaGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCCGTACAGC‑GCCaacgg < 1:1710492/130‑5 (MQ=255) ccaccaGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCCGTACAGC‑GCCaacgg > 2:1710492/1‑126 (MQ=255) caccaGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGt < 1:1329183/149‑1 (MQ=255) caccaGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTg > 2:1360757/1‑150 (MQ=255) caccaGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACCGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTg < 1:1978780/150‑1 (MQ=255) caGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGc < 2:1633759/150‑1 (MQ=255) gCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCaa < 2:2083668/150‑1 (MQ=255) gCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCaa < 2:890490/150‑1 (MQ=255) acacCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAg > 1:1489352/1‑146 (MQ=255) cacCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGa < 1:2357125/150‑1 (MQ=255) cacCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGa < 2:1074151/150‑1 (MQ=255) acCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAg < 1:1867400/114‑1 (MQ=255) acCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAg > 2:1867400/1‑114 (MQ=255) acCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGAt > 1:1518590/1‑150 (MQ=255) acCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGAt < 1:1946859/150‑1 (MQ=255) acCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGAt < 2:433357/150‑1 (MQ=255) ggaaTCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCCGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGAAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGaa < 2:373499/148‑1 (MQ=255) gCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCTCAGGCGGTGGGCAAGGTCGATGaa < 2:1217863/150‑1 (MQ=255) cAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAg > 2:645259/1‑150 (MQ=255) aaTCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGGTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACAGCTTGCCGTTGGCGCTGTCCGGC‑GCCAGGAATACCCGGACTGCCATGCTGGATGCAAGGTCGATGAAgg > 2:872969/1‑150 (MQ=255) tCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGaa < 1:552247/146‑1 (MQ=255) ggCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGa < 1:1790409/150‑1 (MQ=255) gCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCCGTACAGC‑GCCaac > 2:693916/1‑103 (MQ=255) gCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCCGTACAGC‑GCCaac < 1:693916/105‑3 (MQ=255) gCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGAAAAGGAAACCCTGTACATAAAGTAATGTGCCGTTGGCGCTGT‑CGCCAGTCAGGAGTATCTGTTGGCTCAGGCGGTGGGAAAGGTCGATGAACGCCGAc > 1:541934/1‑150 (MQ=255) ccA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGAca < 2:1083397/150‑1 (MQ=255) cA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCCGTACAGC‑GCCaac < 2:1372676/103‑3 (MQ=255) a‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGAcagc < 2:1255247/150‑1 (MQ=255) cTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAgcgg < 1:1744623/150‑1 (MQ=255) cTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTc < 1:157952/150‑1 (MQ=255) gTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCg > 1:2152861/1‑150 (MQ=255) ttGCGGATCGCTGCCTTGGCAAACGCGCCAAGTAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCgg < 2:306805/150‑1 (MQ=255) ggATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTgg < 2:475072/101‑1 (MQ=255) ggATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTgg > 1:475072/1‑101 (MQ=255) ggATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGAt > 2:2234292/1‑112 (MQ=255) ggATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGAt < 1:2234292/112‑1 (MQ=255) gATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGc > 2:1774160/1‑143 (MQ=255) gATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGc < 1:2365528/143‑1 (MQ=255) gATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑aa < 1:525713/150‑1 (MQ=255) ttcggtGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAg > 2:1954707/6‑150 (MQ=255) aTCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAg < 1:963687/150‑1 (MQ=255) aTCGCTGCCTTAGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAg < 2:1815686/150‑1 (MQ=255) tGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGgc‑gc < 2:1342356/66‑1 (MQ=255) tGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGgc‑gc > 1:1342356/1‑66 (MQ=255) tGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCGTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTc > 1:1113318/1‑150 (MQ=255) gCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTcc > 2:995598/1‑150 (MQ=255) ccTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCgg < 1:1652515/137‑1 (MQ=255) ttGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTg < 1:995600/77‑1 (MQ=255) ttGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAg > 2:2290790/1‑105 (MQ=255) ttGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGA‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGGAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGc > 1:739946/1‑150 (MQ=255) tGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCa > 1:1221421/1‑150 (MQ=255) tGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCa < 2:659493/150‑1 (MQ=255) aaaCGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTGGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAg > 1:320435/1‑150 (MQ=255) aaaCGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGAca < 1:1126020/107‑1 (MQ=255) aaCGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGc < 2:1221421/150‑1 (MQ=255) cgcgCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCAc < 1:2281194/150‑1 (MQ=255) ccAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGAtg < 2:2187943/150‑1 (MQ=255) cAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCAc < 2:478517/139‑1 (MQ=255) aaGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAg > 2:2084815/1‑69 (MQ=255) aaGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAg < 1:2084815/69‑1 (MQ=255) aaGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAg < 1:2085211/69‑1 (MQ=255) aGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCgg > 1:1521449/1‑120 (MQ=255) aGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCgg < 2:1521449/120‑1 (MQ=255) ggAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGAtgctgc < 2:78760/150‑1 (MQ=255) ccTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTcgc > 2:1987452/1‑150 (MQ=255) tGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGaa > 1:1362167/1‑98 (MQ=255) cAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACGGGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCgg > 1:1508693/1‑150 (MQ=255) cAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCgg > 2:2127896/1‑150 (MQ=255) aaCGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCggg < 1:645259/150‑1 (MQ=255) aCGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCggg < 2:1509691/149‑1 (MQ=255) cGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAAAAGCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGt > 1:1770652/1‑150 (MQ=255) ggCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTc < 1:1018353/150‑1 (MQ=255) tcctGGCGCCGTACAGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTCCCCCAGCACGATGCTCCCCCCGCGCTGGGCCGGGGTCAGCTcgc > 2:127495/4‑150 (MQ=255) cGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGTACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTcgc > 1:1707101/1‑150 (MQ=255) gTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGTAAAGTG‑CTGGCATCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTcgcg > 2:1270076/1‑150 (MQ=255) tGGCGCCGTACAGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCa > 2:407610/1‑150 (MQ=255) tGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAg > 1:1572744/1‑89 (MQ=255) tGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAg < 2:1572744/89‑1 (MQ=255) | CTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCA‑GGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCC > NC_002947/5105562‑5105859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |