| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,105,716 | G→A | 6.6% | P815L (CCG→CTG) | ydiJ ← | putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,105,716 | 0 | G | A | 6.6% | 427.0 / 13.5 | 147 | P815L (CCG→CTG) | ydiJ | putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (62/74); new base A (6/4); total (68/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
TACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCA > NC_002947/5105569‑5105863 | acacCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGgc‑g < 1:1868273/150‑1 (MQ=255) acCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑Gcc > 2:1817568/1‑150 (MQ=255) cAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAg < 2:951853/150‑1 (MQ=255) aGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAACCCCTGTACGTGCAACGGCTTGCCGTTGGCGCCGTACGCC‑GCCAgg > 1:1015068/1‑150 (MQ=255) tCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATa > 2:1744623/1‑150 (MQ=255) tCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATa > 1:1531603/1‑150 (MQ=255) tCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATa > 2:1790409/1‑150 (MQ=255) tCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATa > 2:1047548/1‑150 (MQ=255) tCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGa < 2:1798701/144‑1 (MQ=255) tCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGa > 1:1798701/1‑144 (MQ=255) tCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCCGTACAGC‑GCCaa > 1:953724/1‑141 (MQ=255) tCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCCGTACAGC‑GCCaa < 2:953724/142‑2 (MQ=255) gCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCgg < 1:1614843/150‑1 (MQ=255) gCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCgg < 2:1363558/150‑1 (MQ=255) cGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTg < 2:44886/150‑1 (MQ=255) tCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGccc > 2:963687/1‑150 (MQ=255) tCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGccc > 1:2167651/1‑150 (MQ=255) cccACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCgg < 2:86884/150‑1 (MQ=255) ccaccaGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGt < 2:1691032/150‑1 (MQ=255) ccaccaGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCCGTACAGC‑GCCaacgg < 1:1710492/130‑5 (MQ=255) caccaGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGt > 2:1329183/1‑149 (MQ=255) caccaGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGt < 1:1329183/149‑1 (MQ=255) caccaGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACCGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTg < 1:1978780/150‑1 (MQ=255) caGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGc < 2:1633759/150‑1 (MQ=255) caGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCCGTGGCCCAGGCGGTGGGc < 2:1006908/150‑1 (MQ=255) acacCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAg < 2:1489352/146‑1 (MQ=255) cacCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGa < 1:2357125/150‑1 (MQ=255) acCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAg < 1:1867400/114‑1 (MQ=255) acCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAg > 2:1867400/1‑114 (MQ=255) acCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGAt < 1:1946859/150‑1 (MQ=255) cAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAg > 2:645259/1‑150 (MQ=255) aaTCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGGTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACAGCTTGCCGTTGGCGCTGTCCGGC‑GCCAGGAATACCCGGACTGCCATGCTGGATGCAAGGTCGATGAAgg > 2:872969/1‑150 (MQ=255) tCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGaa > 2:552247/1‑146 (MQ=255) ggCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGa < 1:1790409/150‑1 (MQ=255) gCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCCGTACAGC‑GCCaac > 2:693916/1‑103 (MQ=255) gCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGAAAAGGAAACCCTGTACATAAAGTAATGTGCCGTTGGCGCTGT‑CGCCAGTCAGGAGTATCTGTTGGCTCAGGCGGTGGGAAAGGTCGATGAACGCCGAc > 1:541934/1‑150 (MQ=255) ccAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGAca < 2:1083397/150‑1 (MQ=255) ccAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGAca > 2:1244939/1‑150 (MQ=255) cAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGAcag < 2:2167651/150‑1 (MQ=255) cAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCCGTACAGC‑GCCaac > 1:1372676/1‑101 (MQ=255) aGGGCCTTGAGCTGCGTGGCGTTGCGGATAGCTGCCTTGGCAACAGCGCCACGGCAAACATGTAAGTGCACCGGCTCACCGTTGGCGGTCTACGGC‑GAGACAGATACCACGTGCGCCCGGCGATGGGAAAGGTAGCAGAAGGCCGAcagc > 2:402727/1‑150 (MQ=255) cTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAgcgg < 1:1744623/150‑1 (MQ=255) aGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGtt > 1:2397232/1‑150 (MQ=255) cTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTc < 1:157952/150‑1 (MQ=255) gCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAg < 1:1034895/150‑1 (MQ=255) cGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGc < 2:1531603/150‑1 (MQ=255) gTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCg > 2:2281194/1‑150 (MQ=255) gTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCg > 1:2152861/1‑150 (MQ=255) ttGCGGATCGCTGCCTTGGCAAACGCGCCAAGTAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCgg < 2:306805/150‑1 (MQ=255) ggATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTgg > 1:475072/1‑101 (MQ=255) ggATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTgg < 2:475072/101‑1 (MQ=255) ggATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGAt > 2:2234292/1‑112 (MQ=255) ggATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGAt < 1:2234292/112‑1 (MQ=255) gATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGc > 2:2365528/1‑143 (MQ=255) gATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑aa < 1:525713/150‑1 (MQ=255) ttcggtGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAg > 2:1954707/6‑150 (MQ=255) tGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGgc‑gc < 2:1342356/66‑1 (MQ=255) tGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTc > 1:1333435/1‑150 (MQ=255) gCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTcc > 2:995598/1‑150 (MQ=255) ccTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCgg > 2:1652515/1‑137 (MQ=255) ccTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCgg < 1:1652515/137‑1 (MQ=255) ttGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTg < 1:995600/77‑1 (MQ=255) ttGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAg < 1:2290790/105‑1 (MQ=255) ttGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGA‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGGAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGc > 1:739946/1‑150 (MQ=255) tGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCa > 1:1221421/1‑150 (MQ=255) aaaCGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTGGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAg > 1:320435/1‑150 (MQ=255) aaaCGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGAca < 1:1126020/107‑1 (MQ=255) aaaCGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGAca > 2:1126020/1‑107 (MQ=255) aaCGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGc < 2:1221421/150‑1 (MQ=255) cgcgCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCAc < 1:2281194/150‑1 (MQ=255) cgcCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGa < 1:2329735/150‑1 (MQ=255) aaGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAg > 2:2084815/1‑69 (MQ=255) aaGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAg > 2:2085211/1‑69 (MQ=255) aaGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAg < 1:2085211/69‑1 (MQ=255) aaGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAg < 1:2084815/69‑1 (MQ=255) aGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCgg > 1:1521449/1‑120 (MQ=255) aaaCCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCg > 1:664220/1‑116 (MQ=255) aaaCCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCg < 2:664220/116‑1 (MQ=255) aCCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCAATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTc > 1:855509/1‑150 (MQ=255) ccTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTcgc > 2:1987452/1‑150 (MQ=255) gTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGAt < 2:1742241/72‑1 (MQ=255) tGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGaa > 1:1362167/1‑98 (MQ=255) tGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGaa < 2:1362167/98‑1 (MQ=255) ccAACGGCAAGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCg > 1:1190304/2‑150 (MQ=255) cAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACGGGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCgg > 1:1508693/1‑150 (MQ=255) cAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCgg > 2:2127896/1‑150 (MQ=255) aaCGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGNTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGATGGGCCggg < 1:402727/150‑1 (MQ=255) aaCGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCggg < 1:645259/150‑1 (MQ=255) aaCGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCggg < 2:1257383/150‑1 (MQ=255) aCGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCggg > 1:1509691/1‑149 (MQ=255) aCGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCggg < 2:1509691/149‑1 (MQ=255) cGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAAAAGCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGt > 1:1770652/1‑150 (MQ=255) ggCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTc < 1:1018353/150‑1 (MQ=255) gCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTc < 1:1244939/150‑1 (MQ=255) cGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGTACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTcgc > 1:1707101/1‑150 (MQ=255) gTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGTAAAGTG‑CTGGCATCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTcgcg > 2:1270076/1‑150 (MQ=255) tGGCGCCGTACAGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCa > 2:407610/1‑150 (MQ=255) cTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGcc < 1:962615/150‑1 (MQ=255) tGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAg < 2:1572744/89‑1 (MQ=255) aCGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTACACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCa > 2:2356548/1‑150 (MQ=255) | TACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGC‑GCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTG‑AAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCA > NC_002947/5105569‑5105863 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |