| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,156,379 | C→T | 6.1% | R264C (CGC→TGC) | PP_4539 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,156,379 | 0 | C | T | 6.1% | 227.4 / 2.9 | 78 | R264C (CGC→TGC) | PP_4539 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (34/38); new base T (2/3); total (36/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
GAGCAGCGCTGGACCGTCGGCAGCCTGGGCACCGCCGCCACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGACACCGCGCCACTGGACGTGCCCTTCGCAGCCCCCCCACAAGCCTGAGAGGACC > NC_002947/5156232‑5156520 | gAGCAGCGCTGGACCGTCGGCAGCCTGGGCACCGCCGCCACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAgccgc < 1:253105/150‑1 (MQ=255) gcgcTGGACCGTCGGCAGCCTGGGCACCGCCGCCACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGccaccc < 1:1115369/150‑1 (MQ=255) gACCGTCGGCAGCCTGGGCACCGCCGCCCCCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGtt < 2:233758/150‑1 (MQ=255) gTCGGCAGCCTGGGCACCGCCGCCACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTAc < 1:621641/150‑1 (MQ=255) tCGGCAGCCTGGGCACCGCCGCCACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTAcc > 2:398389/1‑150 (MQ=255) ggCAGCCTGGGCACCGCCGCCACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTGCTACCtt > 2:212027/1‑150 (MQ=255) aGCCTGGGCACCGCCGCCACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGACAGCCGCCACCCACTGTTATACCTTTAt < 1:931869/150‑1 (MQ=255) ccTGGGCACCGCCGCCACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTc < 1:1434744/150‑1 (MQ=255) aCCGCCGCCAGCTTCGTCCGCAGCGGCCTGGGCTTTGCCTGGCAGCCCAGTAACATGATCGAGCGCGAGCTGCGCGACGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCTGCCACCCACTGTTCTACCTTTATTCGAGCaaa < 1:1489189/150‑1 (MQ=255) aCCGCCGCCACCTTCGTCACCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCaaa < 2:1588771/150‑1 (MQ=255) cgccgcCACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAaga < 1:1387570/150‑1 (MQ=255) cgccgcCACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAaga > 2:496688/1‑150 (MQ=255) gccgccACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAagag > 1:756621/1‑150 (MQ=255) gccgccACCTTCGTCAGCAGCGGCCAGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAagag < 2:2275648/150‑1 (MQ=255) ccgccACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCGGCTGccac < 2:447896/119‑1 (MQ=255) ccgccACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCGGCTGccac > 1:447896/1‑119 (MQ=255) ccgccACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAgaga > 1:316951/1‑150 (MQ=255) ccgccACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAgaga > 2:2226187/1‑150 (MQ=255) gccACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCt < 2:37231/131‑1 (MQ=255) gccACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCt > 1:37231/1‑131 (MQ=255) gccACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCAAGCGATTGGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGagaag < 1:2349820/150‑1 (MQ=255) ccACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGagaaga < 1:1947482/150‑1 (MQ=255) aCCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGAcc < 1:765880/150‑1 (MQ=255) ccTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGAccc > 2:1154283/1‑150 (MQ=255) ttCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCGGCTGccaccc > 2:1367176/1‑113 (MQ=255) ttCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCGGCTGccaccc < 1:1367176/113‑1 (MQ=255) agcagcGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCg < 1:1781997/150‑1 (MQ=255) gcagcGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCgg > 1:2075536/1‑150 (MQ=255) gcagcGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCgg < 1:1489537/150‑1 (MQ=255) cagcGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGc > 1:2059925/1‑150 (MQ=255) agcGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGcc > 2:1668517/1‑150 (MQ=255) gcGGCTTGGGCTTTGCCTGGCTGCCCCGTCAGATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTCCCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCa < 2:1135033/150‑1 (MQ=255) cTGGGCTTTGCCTGGCTGCCCCGTCACATGATCAAGCGCGAGCTGCGCGAAGGCGTGCTCAAACCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTATACCTTTATTCGAGCCAAGAGAAGACCCTGG‑GCCCCGCCACCCAg > 2:154038/1‑150 (MQ=255) tGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGa < 2:315638/150‑1 (MQ=255) tttGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATtctc > 1:368253/1‑150 (MQ=255) tttGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATtctc > 1:301209/1‑150 (MQ=255) ggCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCAt < 2:2255952/149‑1 (MQ=255) gCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATc < 1:188068/150‑1 (MQ=255) gCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCACGGCGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATc < 1:294905/150‑1 (MQ=255) cTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGa > 1:1784611/1‑150 (MQ=255) cTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGa < 2:2057418/150‑1 (MQ=255) cTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGa > 2:2339423/1‑150 (MQ=255) tGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGa > 2:1705458/1‑102 (MQ=255) tGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGa < 1:1705458/102‑1 (MQ=255) ccGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCCTTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTgcg > 1:1025191/1‑150 (MQ=255) ccGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTgcg > 1:840705/1‑150 (MQ=255) ccGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTgcg > 1:444990/1‑150 (MQ=255) ccGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGATgcg > 1:1011834/1‑150 (MQ=255) cacaTGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGc > 2:979007/1‑124 (MQ=255) cacaTGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGc < 1:979007/124‑1 (MQ=255) acaTGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGACGACACTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAAtt > 1:2338955/1‑150 (MQ=255) acaTGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAAtt > 2:1746539/1‑150 (MQ=255) caTGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAAttt < 2:368253/150‑1 (MQ=255) aTGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTc < 2:165198/150‑1 (MQ=255) aTGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTc < 1:789694/150‑1 (MQ=255) aTGATCGAGCGCGAGCTGCGCCAAATCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGTCAGCCGCCACCCACTGTCACACCTTTATTCGAACCCAGAG‑ACATCGTGGTGCTGGGCCACGTAGATTCTCATCGACCTGCTGCGCAATTTc < 1:421103/150‑1 (MQ=255) gATCGAGCGCGGGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGa > 2:2023744/1‑150 (MQ=255) gATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGa < 2:2059925/150‑1 (MQ=255) cGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGacac > 1:430825/1‑150 (MQ=255) gcgAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGACACCgcgc < 2:430825/150‑1 (MQ=255) aGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGACACCGCGCCAc < 2:486361/150‑1 (MQ=255) aGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGACACCGCGCCAc < 1:1154283/150‑1 (MQ=255) gCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGACACCGCGCCACt < 1:2397925/150‑1 (MQ=255) gAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGa < 2:1450901/131‑1 (MQ=255) gAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGa > 1:1450901/1‑131 (MQ=255) gAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGACACCGCGCCACTGGACGTg > 2:212926/1‑150 (MQ=255) ggCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGACACCGCGCCACTGGACGTGccc < 1:2047686/150‑1 (MQ=255) ggCGTGCTCAAGACATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGACACCGCGCCACTGGACGTGccc < 1:496688/150‑1 (MQ=255) gTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGAAACCGCGCCACTGGACGTGCCCTTc > 2:797795/1‑150 (MQ=255) cTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGACACCGCGCCACTGGACGTGCCCTTCGCa < 2:2075536/150‑1 (MQ=255) aaGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCtgctgc < 1:591377/109‑1 (MQ=255) aaGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCtgctgc > 2:591377/1‑109 (MQ=255) ccATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGACACCGCGCCACTGGACGTGCCCTTCGCAGccccc < 2:444990/150‑1 (MQ=255) ccGCTGGATGAGGGTGGCAGCGGCTAGCCACTGTTCTACCTTTATATGAGTAAAGAGAAGAGCCTGG‑GTCCGGCCATGGAGGTGGTCATCGGCCTGCTGCGCAATTTCGACACGGCGCCACCGGACGTGCCCTTCGCGGCCCCCCcacga < 2:1357734/150‑3 (MQ=255) tCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGAc > 1:1633071/1‑85 (MQ=255) tCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGAc < 2:1633071/85‑1 (MQ=255) aGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGACACCGCGCCACTGGACGTGCCCTTCGCAGCCCCCCCACAAGCCTGAGAgg > 2:2032753/1‑150 (MQ=255) gggTGGTAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAACGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGACACCGCGCCACTGGACGTGCCCTTCGCAGCCCCCCCACAAGCCTGAGAGGa > 2:242759/1‑150 (MQ=255) gTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGACACCGCGCCACTGGACGTGCCCTTCGCAGCCCCCCCACAAGCCTGAGAGGAcc > 1:1051113/1‑150 (MQ=255) | GAGCAGCGCTGGACCGTCGGCAGCCTGGGCACCGCCGCCACCTTCGTCAGCAGCGGCCTGGGCTTTGCCTGGCTGCCCCGTCACATGATCGAGCGCGAGCTGCGCGAAGGCGTGCTCAAGCCATTGCCGCTGGATCAGGGTGGCAGCCGCCACCCACTGTTCTACCTTTATTCGAGCAAAGAGAAGACCCTGG‑GCCCGGCCACGCAGATTCTCATCGACCTGCTGCGCAATTTCGACACCGCGCCACTGGACGTGCCCTTCGCAGCCCCCCCACAAGCCTGAGAGGACC > NC_002947/5156232‑5156520 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |