Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,183,223 C→A 5.2% G187C (GGC→TGC)  PP_4563 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,183,2230CA 5.2% 275.7 / 2.8 88G187C (GGC→TGC) PP_4563hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (44/38);  new base A (2/3);  total (46/42)
Fisher's exact test for biased strand distribution p-value = 6.63e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.02e-01

CCAACACCCCGCCTTCGGCTTCCAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGCTGGCCAACCTTGTAGTCGGCCGGGGTGACATCGAG  >  NC_002947/5183082‑5183370
                                                                                                                                             |                                                                                                                                                    
ccAACACCCCGCCTTCGGCTTCCAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGGGCATGCACGAgaagg                                                                                                                                              <  2:420848/150‑5 (MQ=255)
ccAACACCCCGCCTTCGGCTTCCAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGGGCATGCACGAgaag                                                                                                                                               >  2:1342657/1‑146 (MQ=255)
ccAACACCCCGCCTTCGGCTTCCAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGGGCATGCACGAgaag                                                                                                                                               <  1:1342657/149‑4 (MQ=255)
       cccGCCTTCGGCTTCCAGGCGCGCCATGATCTGCTCTTGCCGGGTGTCAGCCCGGGAGGCGGCTACCGGCTGCAGTCTCAACGAAATCGTTCCGTCCGGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACtt                                                                                                                                       >  2:1478728/1‑150 (MQ=255)
       cccGCCTTCGGCTTCCAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACtt                                                                                                                                       >  2:1409688/1‑150 (MQ=255)
       cccGCCTTCGGCTTCCAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACtt                                                                                                                                       >  2:447653/1‑150 (MQ=255)
       cccGCCTTCGGCTTCCAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACtt                                                                                                                                       >  2:1754399/1‑150 (MQ=255)
        ccGCCTTCGGCTTCCAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTg                                                                                                                                      >  1:835660/1‑150 (MQ=255)
         cGCCTTCGGCTTCCAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGa                                                                                                                                     >  1:1148387/1‑150 (MQ=255)
           ccTTCGGCTTCCAGGCGCGCCATGATCTGCTCTTGCAGGGCGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAac                                                                                                                                   <  2:1329261/150‑1 (MQ=255)
              tCGGCTTCCAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACAcc                                                                                                                                <  1:1754399/150‑1 (MQ=255)
                ggCTTCCAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTc                                                                                                                              <  1:1973126/150‑1 (MQ=255)
                 gCTTCCAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCg                                                                                                                             >  2:1864457/1‑150 (MQ=255)
                   ttCCAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGtt                                                                                                                           <  1:1827955/150‑1 (MQ=255)
                   ttCCAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGtt                                                                                                                           >  1:253317/1‑150 (MQ=255)
                    cccAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCTGTCTCAGTGAAATCTTGCGGTCCGCGCGCACTCCCTTGCTGACCCCCTTCTCGTTCAAGCGCGAGCGCGAGAACTTGACCATCTCGtgc                                                                                                                          <  2:1483570/149‑3 (MQ=255)
                      cAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCtt                                                                                                                        >  2:1862310/1‑150 (MQ=255)
                       aGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTtg                                                                                                                       <  1:960303/150‑1 (MQ=255)
                               cATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAg                                                                                                               >  1:666579/1‑150 (MQ=255)
                               cATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAg                                                                                                               >  2:1737427/1‑150 (MQ=255)
                                aTGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAgg                                                                                                              >  2:1243648/1‑150 (MQ=255)
                                 tGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGaa                                                                                                                                          >  2:933376/1‑121 (MQ=255)
                                 tGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGc                                                                                                             <  2:401366/150‑1 (MQ=255)
                                 tGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCACTTCTCGTGCATGCCCGAGCGCAAGaa                                                                                                                                          <  1:933376/121‑1 (MQ=255)
                                   aTCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGaa                                                                                                                                    <  2:690112/125‑1 (MQ=255)
                                   aTCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGaa                                                                                                                                    >  1:690112/1‑125 (MQ=255)
                                   aTCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGccc                                                                                                           <  2:666579/150‑1 (MQ=255)
                                            tGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCgg                                                                                                  >  2:1915406/1‑150 (MQ=255)
                                             gCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGa                                                                                                                                                   <  2:1106400/100‑1 (MQ=255)
                                             gCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGa                                                                                                                                                   >  1:1106400/1‑100 (MQ=255)
                                               aGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGgttg                                                                                               >  1:919094/1‑150 (MQ=255)
                                                 ggTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGgttgtt                                                                                             <  1:447653/150‑1 (MQ=255)
                                                     tCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCtt                                                                                                                        <  1:1154895/119‑1 (MQ=255)
                                                     tCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCtt                                                                                                                        >  2:1154895/1‑119 (MQ=255)
                                                     tCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTtgatg                                                                                        <  2:253317/150‑1 (MQ=255)
                                                      ccGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCGTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTtgatga                                                                                       <  1:1737427/150‑1 (MQ=255)
                                                       cGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCATGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTGGTGCATTCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGGGGGTGTTgatgat                                                                                      >  1:2298416/1‑150 (MQ=255)
                                                        gCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGatgatg                                                                                     >  2:376917/1‑150 (MQ=255)
                                                           aGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACGTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGcc                                                                                  <  2:592510/150‑1 (MQ=255)
                                                              gcggcgCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACTCCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTCATCCTGACCTTg                                                                               <  2:835660/150‑1 (MQ=255)
                                                                     cTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCa                                                                        >  2:888423/1‑150 (MQ=255)
                                                                      tACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTGTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCAt                                                                       >  1:1366337/1‑150 (MQ=255)
                                                                               cAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTc                                                              <  1:2337276/150‑1 (MQ=255)
                                                                                aGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTACTTGATAAAGCCCTTCTCGTGCATGCCCGAGCGTTGGAACTTGAAAACCCCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCg                                                             >  1:1375911/1‑150 (MQ=255)
                                                                                 ggCTCAGTGAAATCTTGCCGTCCTGGCGCACTTGCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGAGGATGGCCTTGAAGCCCATCGGCGTTTCGc                                                            <  2:2252549/150‑1 (MQ=255)
                                                                                  gCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTtgt                                                                                                                      >  1:1518493/1‑92 (MQ=255)
                                                                                  gCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTtgt                                                                                                                      <  2:1518493/92‑1 (MQ=255)
                                                                                  gCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGcc                                                           >  1:1624753/1‑150 (MQ=255)
                                                                                        tGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGccac                                                     >  2:1312020/1‑150 (MQ=255)
                                                                                             tCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTtga                                                                                          >  2:1655319/1‑108 (MQ=255)
                                                                                             tCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTtga                                                                                          <  1:1655319/108‑1 (MQ=255)
                                                                                             tCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACcagca                                                <  1:749148/150‑1 (MQ=255)
                                                                                                    gTCCTGGCGCTCTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGcc                                                           >  2:1299316/1‑132 (MQ=255)
                                                                                                    gTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGa                                                                              <  2:591561/113‑1 (MQ=255)
                                                                                                    gTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGa                                                                              >  1:591561/1‑113 (MQ=255)
                                                                                                    gTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGcc                                                           <  1:1299316/132‑1 (MQ=255)
                                                                                                    gTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGAc                                         <  1:571744/150‑1 (MQ=255)
                                                                                                    gTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGAc                                         >  2:1748770/1‑150 (MQ=255)
                                                                                                        tGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGc                                     >  2:1500933/1‑150 (MQ=255)
                                                                                                         ggCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGCt                                    <  1:1862310/150‑1 (MQ=255)
                                                                                                          gcgcACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTtgt                                                                                                                      >  2:1850023/1‑68 (MQ=255)
                                                                                                          gcgcACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTtgt                                                                                                                      <  1:1850023/68‑1 (MQ=255)
                                                                                                            gcACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGCTGGc                                 <  1:1864457/150‑1 (MQ=255)
                                                                                                            gcACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGCTGGc                                 >  1:671660/1‑150 (MQ=255)
                                                                                                                ttCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTtgtg                                                                                                                     >  2:1786601/1‑63 (MQ=255)
                                                                                                                ttCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTtgtg                                                                                                                     <  1:1786601/63‑1 (MQ=255)
                                                                                                                   cTTGATGAAGCCCTTCTCGTGCATGCCTGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGCTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGCCCACCAGCAGCTCGACCGGCTGGCCAACCtt                          <  2:2298416/150‑1 (MQ=255)
                                                                                                                   cTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGt                                                                                                       <  2:446857/74‑1 (MQ=255)
                                                                                                                   cTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGt                                                                                                       >  1:446857/1‑74 (MQ=255)
                                                                                                                   cTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGCTGGCCAACCtt                          >  1:248348/1‑150 (MQ=255)
                                                                                                                   cTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGCTGGCCAACCtt                          <  2:919094/150‑1 (MQ=255)
                                                                                                                    ttGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGCTGGCCAACCTTg                         <  1:1312020/150‑1 (MQ=255)
                                                                                                                    ttGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGCTGGCCAACCTTg                         >  2:1113804/1‑150 (MQ=255)
                                                                                                                    ttGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACAAGCAGCTCGACCGGCTGGCCAACCTTg                         <  1:1915406/150‑1 (MQ=255)
                                                                                                                        tgaAGCCCTGCTCGTGCAGGCCCGTGGGCAAGTGCTTGAACACCTCGTTCTTGTGGATCAGGCCGCCGTGGCGCTTGTTGATGATGGCCTTGAACCGCATCGGCGTCTCGCGGGCCACCAGCCTGTCGACCGGCTGGCCTACCTTGTAGt                     >  2:681226/1‑150 (MQ=255)
                                                                                                                          aaGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGCTGGCCAACCTTGTAGTCg                   <  1:376917/150‑1 (MQ=255)
                                                                                                                           aGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGAc                                         <  2:1019359/127‑1 (MQ=255)
                                                                                                                           aGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGAc                                         >  1:1019359/1‑127 (MQ=255)
                                                                                                                           aGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTGCGCCGGCCACCAGCAGCTCGACCGGCTGGCCAACCTTGTAGTCgg                  >  2:1502045/1‑150 (MQ=255)
                                                                                                                            gCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGCTGGCCAACCTTGTAGTCGGc                 >  2:380021/1‑150 (MQ=255)
                                                                                                                                ttCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTTGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGCTGGCCAACCTTGTAGTCGGCCggg             <  2:542740/150‑1 (MQ=255)
                                                                                                                                ttCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGCTGGCCAACCTTGTAGTCGGCCggg             <  1:1113804/150‑1 (MQ=255)
                                                                                                                                 gctcGGGCATGCACGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTtgat                                                                                         >  2:344052/2‑73 (MQ=255)
                                                                                                                                 gctcGGGCATGCACGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTtgat                                                                                         <  1:344052/72‑1 (MQ=255)
                                                                                                                                   tcGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGCAAGAAGCCTTGAAGCCCATCGGCGTTTCGCCGGCCCCCAGCAGCTCGACCGGCTGGCCAACCTTGTAGTCGGCCgggggg          >  1:1740137/1‑148 (MQ=255)
                                                                                                                                     gTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTc                                                              >  2:322466/1‑96 (MQ=255)
                                                                                                                                     gTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTc                                                              <  1:322466/96‑1 (MQ=255)
                                                                                                                                      tGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGCTGGCCAACCTTGTAGTCGGCCGGGGTGACa       >  1:1287697/1‑150 (MQ=255)
                                                                                                                                           ggccGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGAGGTTGTTGACGATTGCCTTGAAGATCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGCTGGCCAACCATGTAGTCGGCCGGGGTGACATCGAg  <  1:170127/148‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                                    
CCAACACCCCGCCTTCGGCTTCCAGGCGCGCCATGATCTGCTCTTGCAGGGTGTCCGCCAGGGCGGCGCCTACCGGCTGCAGGCTCAGTGAAATCTTGCCGTCCTGGCGCACTTCCTTGATGAAGCCCTTCTCGTGCATGCCCGAGCGCAAGAACTTGAACACCTCGTTCTTGTGGATCAGGCCCCAGTGGCGGTTGTTGATGATGGCCTTGAAGCCCATCGGCGTTTCGCCGGCCACCAGCAGCTCGACCGGCTGGCCAACCTTGTAGTCGGCCGGGGTGACATCGAG  >  NC_002947/5183082‑5183370

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: