| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 438,271 | A→G | 5.2% | L31P (CTG→CCG) | rdoA ← | serine/threonine protein kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 438,271 | 0 | A | G | 5.2% | 335.9 / 4.1 | 111 | L31P (CTG→CCG) | rdoA | serine/threonine protein kinase |
| Reads supporting (aligned to +/- strand): ref base A (46/58); new base G (3/3); total (50/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
GTGCTCTTCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACAGGCAGGCCCGCAATCCGCTCGCCGCGT > NC_002947/438126‑438420 | gTGCTCTTCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCt > 1:356411/1‑150 (MQ=255)gTGCTCTTCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGACAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCt > 2:466197/1‑150 (MQ=255) tGCTCTTCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCtt < 1:732124/150‑1 (MQ=255) gCTCTTCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCttt > 1:1709746/1‑150 (MQ=255) ctctTCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTc < 1:1820654/150‑1 (MQ=255) tctTCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCa > 2:220138/1‑142 (MQ=255) tctTCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTcc > 1:209592/1‑150 (MQ=255) tCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑t < 1:725897/150‑1 (MQ=255) gAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGc < 2:1085049/150‑1 (MQ=255) gAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGc < 2:2380932/150‑1 (MQ=255) gATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTc < 1:473330/150‑1 (MQ=255) tGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGAc > 2:1393839/1‑150 (MQ=255) tGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGAc > 2:382900/1‑150 (MQ=255) tGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGAc < 1:481278/150‑1 (MQ=255) cATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCa < 2:177603/150‑1 (MQ=255) aTCGCTCCAGCGGCCTGGGCGGTAGAAGTTGGCAATCAACGGCGGCGCGTCTTCGATGCCCACCTGGTACACGTGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGCGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAg < 2:416977/150‑1 (MQ=255) aTCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCtt > 2:740544/1‑130 (MQ=255) aTCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCtt < 1:740544/130‑1 (MQ=255) aTCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAg < 1:1393839/150‑1 (MQ=255) ccAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCggg < 1:1923316/150‑1 (MQ=255) cAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCgggg < 2:2142467/150‑1 (MQ=255) cGGCCTGGGCGGTAGAACTTGGCAATGTTCGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTg > 1:64801/1‑150 (MQ=255) gCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCtt < 2:2275641/118‑1 (MQ=255) gCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCtt > 1:2275641/1‑118 (MQ=255) ccTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAgg < 2:61768/150‑1 (MQ=255) ccTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAgg < 2:356411/150‑1 (MQ=255) ccTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAgg < 1:2283340/150‑1 (MQ=255) tGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGAAGAAGACCCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGgt > 1:419403/1‑150 (MQ=255) gggCGGTAGAACTGGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGANAGCCCAGGCNTTCCAC‑TGNGTCCAGGACCAGGTCGGGGGTGAGGgtn < 1:906196/150‑2 (MQ=255) tAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAg > 1:267443/1‑150 (MQ=255) cTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGGACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGc < 2:1395755/111‑1 (MQ=255) cTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGc > 1:1395755/1‑111 (MQ=255) ttGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCgggt > 1:2000974/1‑128 (MQ=255) ttGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTgg > 2:466662/1‑150 (MQ=255) ttGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACAAGACGGTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTgg < 1:1468287/150‑1 (MQ=255) ttGGCAATCAACGGCTGCGCGTCTCCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCTAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTgg < 2:85753/150‑1 (MQ=255) tGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTgg > 2:859422/1‑149 (MQ=255) tGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTgg < 1:859422/149‑1 (MQ=255) gCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGAc < 2:1370720/150‑1 (MQ=255) tCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAgg > 1:2253142/1‑128 (MQ=255) tCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtgg > 2:2259600/1‑150 (MQ=255) tCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtgg > 1:1875932/1‑150 (MQ=255) cAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtggt < 1:382900/150‑1 (MQ=255) cAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtggt < 1:2072385/150‑1 (MQ=255) cAACGGCTGCGCGTCTTCGAAGCCAACCTGGTACACGCGGTTTTCGTAGATGTTAAGCGCCAGCAACCGAGAGTCGCGGCAAAAGCCCAGGGTTTCGTC‑TGGAGTTAGTATCATGTCGGGGGTGAGGGTTTCGAAGCGGTGCAACAtggt < 2:883183/150‑1 (MQ=255) aaCGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtggtg < 2:81889/150‑1 (MQ=255) aaCGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtggtg > 1:1946942/1‑150 (MQ=255) aaCGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtggtg > 1:883183/1‑150 (MQ=255) cgcgTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGa < 2:1967057/150‑1 (MQ=255) gcgTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCTAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTc < 1:142130/86‑1 (MQ=255) gcgTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCTAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTc > 2:142130/1‑86 (MQ=255) gTCTTTGATGCCCACCTGGTACACGCGGTTCTCGCAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTAGGACATGGTGGCTCCGGAggg < 1:487815/150‑1 (MQ=255) ttCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTaa > 1:2008778/1‑150 (MQ=255) ttCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTaa > 1:2393154/1‑150 (MQ=255) cccACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGt < 2:1875932/150‑1 (MQ=255) cccACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGt < 2:267443/150‑1 (MQ=255) ccACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTg > 2:302696/1‑150 (MQ=255) acACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCTGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTg > 2:226116/2‑150 (MQ=255) cACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTgg > 2:1156812/1‑150 (MQ=255) aCCTGGTGCACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTggg < 2:1262752/150‑1 (MQ=255) aCCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTggg > 1:267543/1‑150 (MQ=255) tGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGcc < 1:2308783/150‑1 (MQ=255) tACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAATCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATg < 2:64801/150‑1 (MQ=255) acGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtggt < 2:2031379/116‑1 (MQ=255) acGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtggt > 1:2031379/1‑116 (MQ=255) acGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTa > 1:1228880/1‑150 (MQ=255) tcGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTAt < 2:1663856/150‑1 (MQ=255) tcGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTAt < 2:1385637/150‑1 (MQ=255) tcGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCAGAGAAA‑ACAACGACTTCAACACGAGCGCAGGACCAGAGCGGTAGAGAGGTAGTCGAAGGGCAGGTACTTGGTGGGTCGGGAGGGTAAGCGGCGTGGGGCCATGGTACCGCGTTAt > 2:2079309/1‑150 (MQ=255) gaaGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGc > 2:2209329/3‑150 (MQ=255) gTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGcgcg > 1:100013/1‑144 (MQ=255) gTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGcgcg < 2:100013/144‑1 (MQ=255) gTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGc > 1:1390914/1‑150 (MQ=255) gTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGc > 1:2073862/1‑150 (MQ=255) gTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACAAGGTCGGGGGTGAGGCTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAATCGGCGTGGGACTATGTGAGCGCGTTATgg > 2:883962/1‑149 (MQ=255) gTAGCCGTTCAGCGCCAGCACCCGCGCGTCGCTGAGAAAGCCCAGGCGTTCTAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCAAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGc < 2:52539/150‑1 (MQ=255) tAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTggg > 2:2265294/1‑129 (MQ=255) tAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTggg < 1:2265294/129‑1 (MQ=255) tGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGc > 2:1817948/1‑103 (MQ=255) tGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGc < 1:1817948/103‑1 (MQ=255) gTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGc < 2:2008778/150‑1 (MQ=255) aGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGc < 2:1709746/150‑1 (MQ=255) gcCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTc < 2:419403/150‑1 (MQ=255) cAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAgc < 1:51410/126‑1 (MQ=255) cAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAgc > 2:51410/1‑126 (MQ=255) gCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCAcag > 1:1987251/1‑150 (MQ=255) aCCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑CACGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCAcaggc < 1:160621/150‑1 (MQ=255) ccGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTGGAGTACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCAcaggcag < 1:632907/150‑1 (MQ=255) ccGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCAcaggcag > 1:1064382/1‑150 (MQ=255) cGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGGCATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCtt < 2:2339114/133‑1 (MQ=255) cGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGGCATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCtt > 1:2339114/1‑133 (MQ=255) cTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACAGGCAGGCCCGCAATc < 2:2073862/150‑1 (MQ=255) tggaAAGCCTGGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCtt > 2:2364436/3‑129 (MQ=255) tggaAAGCCTGGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACAGGCAGGCCCGCAATCCg > 2:925126/3‑150 (MQ=255) gagaAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACAGGCAGGCCCGCAATCCg < 1:2209329/150‑1 (MQ=255) cAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTgg > 2:544873/1‑55 (MQ=255) cAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTgg < 1:544873/55‑1 (MQ=255) cAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAgc < 2:2408242/99‑1 (MQ=255) cAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAgc > 1:2408242/1‑99 (MQ=255) aGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACAGGCAGGCCCGCAATCCGCTCGCCGCGt < 2:1987251/150‑1 (MQ=255) | GTGCTCTTCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCGCTGAGAAAGCCCAGGCTTTCCAC‑TGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACAGGCAGGCCCGCAATCCGCTCGCCGCGT > NC_002947/438126‑438420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |