| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,257,904 | T→C | 5.6% | intergenic (‑55/+89) | PP_4634 ← / ← PP_4635 | alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,257,904 | 0 | T | C | 5.6% | 337.3 / 5.5 | 107 | intergenic (‑55/+89) | PP_4634/PP_4635 | alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase |
| Reads supporting (aligned to +/- strand): ref base T (53/48); new base C (2/4); total (55/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
GTTGGGCGTGGCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCA > NC_002947/5257759‑5258053 | attgGGCGTGGCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCC > 2:477278‑M1/2‑150 (MQ=255) gCGTGGCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACCGGCCTCTTC > 1:1036372‑M1/1‑150 (MQ=255) gTGGCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGC > 1:1737327‑M1/1‑150 (MQ=255) ggCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGG < 2:962623‑M1/150‑1 (MQ=255) ggCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGG < 1:772372‑M1/150‑1 (MQ=255) ggCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGG < 1:1482972‑M1/150‑1 (MQ=255) gAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGc > 1:686508/1‑150 (MQ=255) aaGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCt > 2:790770/1‑150 (MQ=255) gccgccGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTcc < 2:612572/150‑1 (MQ=255) ccgccgAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACCGGCCTCTTCGCGGGcttgcccgcgaag < 1:2094275‑M1/150‑14 (MQ=255) cgccgAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTa > 1:31941/1‑150 (MQ=255) gccgAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTAc > 2:1376093/1‑150 (MQ=255) gccgAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTAc > 2:717684/1‑150 (MQ=255) ccgAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGACGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACa > 1:1869095/1‑150 (MQ=255) gAGGCTGTATCCGGCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAgg < 1:880017/150‑1 (MQ=255) gCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAggggg > 1:773763/1‑150 (MQ=255) gCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAggggg > 2:1265444/1‑150 (MQ=255) cTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGga < 2:31941/150‑1 (MQ=255) tGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGgag > 2:1347318/1‑150 (MQ=255) tGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGATGGCTCAGCACACTCATGGCGCATGTCCTGGTGTTGTGCGCCAAAACTAGCAAAGG‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGgag > 1:1855510/1‑150 (MQ=38) gTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGgaga < 1:1665127/150‑1 (MQ=255) tATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGTGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGaa > 1:193884/1‑150 (MQ=255) cGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGG > 1:2065570‑M1/1‑120 (MQ=255) tCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGtgaacccgctcccacaggttctccccatgta < 2:1737327‑M1/150‑32 (MQ=255) cGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACCGGCCTCTTCGCGGGcaagcccgctcccacaggttctccccctgtag < 1:1344510‑M1/150‑33 (MQ=255) gaccgcGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGtgagcccgctcccacaggttctccccctgtagg > 1:696442‑M1/3‑117 (MQ=255) gCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGa > 1:2125833/1‑150 (MQ=255) gcgGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACCGGCCTCTTCGCGGGcaagcccgctcccacaggttctccccctgtaggagcg < 2:1036372‑M1/150‑38 (MQ=255) cgGGGTGGCGAAATGGGGTAGCGGGTTTGATTAGGCTACTCATGGCGCATGGGCTGTTGTTGTGCGCCAGAACTAGCAAAGA‑TGTTGCAGCCTGTACTGGCCTCTTCGCGGGTGAGCCCGCTCCTACAGGGGGAGAACCTGTGGGGGCgc < 2:1362777/150‑2 (MQ=38) ggggTGGCGAAATGGGGTAGCGGGTTGGATGGGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCggg < 1:1184958/150‑1 (MQ=255) gTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCtt < 1:1347318/150‑1 (MQ=255) gAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGcccg < 1:1315936‑M2/150‑5 (MQ=255) aTGGGGTAGCGGGTTTGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGACAAAGCTAG‑AACGACTTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGcccgcga > 1:1353828‑M2/1‑143 (MQ=255) gggTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGtgagcccgctcccacaggttctccccctgtaggagcgggttcacccgcgaaga < 2:696442‑M1/150‑54 (MQ=255) gTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCtgtg < 1:652657/126‑1 (MQ=255) gTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCtgtg > 2:652657/1‑126 (MQ=255) aGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGcccgcgaagaggcc > 2:1315936‑M2/1‑136 (MQ=255) cGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCgg < 1:2081791/150‑1 (MQ=255) ggATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAgg < 2:2039472/150‑1 (MQ=255) gATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGc > 1:893629/1‑150 (MQ=255) gAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCtgtg < 2:1603591/112‑1 (MQ=255) gAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCtgtg > 1:1603591/1‑112 (MQ=255) gCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTAccc > 1:975152/1‑150 (MQ=255) tACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGGGAGAACCTGTGGGAGCGGGCtt < 1:213156/118‑1 (MQ=255) tACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGGGAGAACCTGTGGGAGCGGGCtt > 2:213156/1‑118 (MQ=255) cTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGAtt < 2:1869095/150‑1 (MQ=255) tCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTa < 2:109364/150‑1 (MQ=255) tCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTa > 1:937836/1‑150 (MQ=255) tCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTa > 1:1634263/1‑150 (MQ=255) aTGGCTCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACa < 1:477278/150‑1 (MQ=255) aTGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGGCGTTGCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACa < 2:2111856/150‑1 (MQ=255) aTGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGcaagcccgctcccacaggttctccccctgtaggagcgggttcacccgcgaagaggccagtacaggctacaaaatctttg > 1:673176‑M1/1‑71 (MQ=255) aTGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACa > 1:196183/1‑150 (MQ=255) cgcCTGTCCTGTTGTTGTGCTCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTATTCGCGGGTAAACCCGCTCCTCCAGGGGGAGAACCTGTGGGACCGGGCTTGCACGAAAAGATGCCGGTACAGGCTTACCCGATTACAGCTc < 1:1376093/150‑1 (MQ=255) gcATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGt < 2:764702/67‑1 (MQ=255) gcATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGaa < 1:1104150/91‑1 (MQ=255) gcATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGaa > 2:1104150/1‑91 (MQ=255) gcATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGTTCg > 2:2076497/1‑150 (MQ=255) tCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCGTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGAGAGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCa > 1:1642515/1‑150 (MQ=255) ccTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAg > 2:1399964/1‑150 (MQ=255) cTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGt < 1:1611518/150‑1 (MQ=255) tgttgttgtGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGcaagcccgctcccacaggttctccccctgtaggagcgggttcaccc > 1:1795679‑M1/1‑58 (MQ=255) tgttgttgtGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGcaagcccgctcccacaggttctccccctgtaggagcgggttcaccc < 2:1795679‑M1/104‑47 (MQ=255) tgttgttgtGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTc < 2:937836/150‑1 (MQ=255) ttgttgtGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGa > 1:182642/1‑150 (MQ=255) tgttgtGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGaa < 2:975152/150‑1 (MQ=255) gttgtGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACCGGCCTCTTCGCGGGcaagcccgctcctacaggttctccccctgtaggagcgggttcacc < 1:1425116‑M1/99‑46 (MQ=255) gttgtGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACCGGCCTCTTCGCGGGcaagcccgctcctacaggttctccccctgtaggagcgggttcacc > 2:1425116‑M1/1‑54 (MQ=255) gtgCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCtgt > 2:1920076/1‑81 (MQ=255) gtgCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGt > 2:1996695/1‑111 (MQ=255) gtgCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGt < 1:1996695/111‑1 (MQ=255) gcCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGt < 2:1567276/138‑1 (MQ=255) ccAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATc > 2:1428593/1‑150 (MQ=255) cAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGcaagcccgctcccacaggttctccccctgtaggagcgggttcacc > 1:692740‑M1/1‑45 (MQ=255) cAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGcaagcccgctcccacaggttctccccctgtaggagcgggttcacc < 2:692740‑M1/90‑46 (MQ=255) aaaCTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAATCTGTGGGAGCGGGCTTGCCCCCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGt < 1:717684/150‑1 (MQ=255) aaaCTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCGCTTCACGGTTAAACCCGAAAACGCTGGGTGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGGACAGGCTTACCCGAGTACATCTCGACGCAGTCGAACTTCACATCAGt > 2:1790750/1‑150 (MQ=25) aaCTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTg > 2:2089567/1‑150 (MQ=255) gCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTgg < 1:2230569/69‑1 (MQ=255) gCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTgg > 2:2230569/1‑69 (MQ=255) cAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGcccgcgaagaggccagtacaggctacaaaatctttgctagttttggcgcacaacaacaggacatgcgccat > 1:673176‑M2/1‑79 (MQ=255) cAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGcccgcgaagaggccagtacaggctacaaaatctttgctagttttggcgcacaacaacaggacatgcgccat < 2:673176‑M2/150‑72 (MQ=255) aaaGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGtgaacccgctcctacaggttctccccctgtaggagcgg < 2:678091‑M1/73‑39 (MQ=255) aaaGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGtgaacccgctcctacaggttctccccctgtaggagcgg > 1:678091‑M1/1‑35 (MQ=255) aaaGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCgg < 2:494978/94‑1 (MQ=255) aaaGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCgg > 1:494978/1‑94 (MQ=255) aaaGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGt > 1:2218112/1‑150 (MQ=255) aaGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGt > 1:1979136/1‑141 (MQ=255) aaGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGt < 2:1979136/141‑1 (MQ=255) tttGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGt < 1:1226414/150‑1 (MQ=255) tttGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGt < 1:1265444/150‑1 (MQ=255) ttGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTc < 1:790770/150‑1 (MQ=255) gTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCtgt < 1:994518/56‑1 (MQ=255) gTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCtgt > 2:1816547/1‑56 (MQ=255) gTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCtgt < 1:1816547/56‑1 (MQ=255) tGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCaa < 2:182642/150‑1 (MQ=255) aCTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGt > 2:2137924/1‑150 (MQ=255) cTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTAGCCGATTACAGCTCGACGCAGTCGAACTTCACCTCGGTGGCCACGTCTTTGTCCTAGTCAACGTc > 2:722720/1‑150 (MQ=255) tGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCa < 2:1855510/150‑1 (MQ=255) tGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCa > 2:1386601/1‑150 (MQ=255) | GTTGGGCGTGGCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGA‑TTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCA > NC_002947/5257759‑5258053 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |