Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 5,261,122 | G→T | 7.0% | P176Q (CCG→CAG) | PP_4637 ← | 5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase family protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 5,261,122 | 0 | G | T | 7.0% | 363.2 / 11.5 | 115 | P176Q (CCG→CAG) | PP_4637 | 5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase family protein |
Reads supporting (aligned to +/- strand): ref base G (54/53); new base T (2/6); total (56/59) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.73e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.56e-01 |
Only 100 of 117 total aligned reads displayed.
GCAGCCCCAGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGAGGATGGGTTCA > NC_002947/5260973‑5261271 | ccAGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGt < 1:775196/150‑1 (MQ=255) ccAGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGt > 2:2045355/1‑150 (MQ=255) cAGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGtt > 2:1205539/1‑150 (MQ=255) aGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTg < 1:2316282/150‑1 (MQ=255) ggTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCACCCGGCAGGTTtgc < 2:33001/150‑1 (MQ=255) ggTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCTGCCGGTTgat < 2:2110824/150‑3 (MQ=255) gTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCTGCCGGTTgatg < 2:1627615/150‑4 (MQ=255) cTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCTGCCGGTTgatggc < 2:2365080/150‑6 (MQ=255) cTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCTGCCGGTTgatggc < 1:1222328/150‑6 (MQ=255) cTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACAGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTggcggc < 2:260282/150‑1 (MQ=255) ttGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGcc > 1:1916418/1‑150 (MQ=255) ttGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGcc > 1:2227394/1‑150 (MQ=255) ttGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGcc > 1:1453972/1‑150 (MQ=255) ccAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGc < 2:561095/150‑1 (MQ=255) ccAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGc > 1:1712766/1‑150 (MQ=255) ccAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCGGAACCGGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGc > 1:1468481/1‑150 (MQ=255) cAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTACTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAg < 1:1908013/135‑1 (MQ=255) cAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTACTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAg > 2:1908013/1‑135 (MQ=255) aaTCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGa < 2:1010557/150‑1 (MQ=255) gcacaAGGCGCGGCGTGGCGACCGGCGACCAGGCGCAGCGACAGTACTTTGTAGGGCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGGGTCGGAACCCGATCGAGGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAgg < 2:696159/149‑1 (MQ=255) acaAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCTACTTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGtt > 2:1475592/1‑150 (MQ=255) acaAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCGCCAACCTGCCGGTTgatggc > 1:2358867/1‑133 (MQ=255) acaAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGtt > 1:167873/1‑150 (MQ=255) acaAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGtt > 1:1752070/1‑150 (MQ=255) acaAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGtt < 2:290739/150‑1 (MQ=255) acaAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGtt > 1:2050547/1‑150 (MQ=255) caAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTg > 1:1342990/1‑150 (MQ=255) aggcgTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCa < 2:2171009/150‑1 (MQ=255) ggcgTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGTCGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAg < 1:1985885/150‑1 (MQ=255) ggcgTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAg < 2:1041953/150‑1 (MQ=255) ggcgTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAg < 1:535149/150‑1 (MQ=255) gTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGGGCCTGAACCAGATTGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCTAGTcc > 1:18428/1‑150 (MQ=255) gTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGcc > 2:1046665/1‑150 (MQ=255) tGCGACCGTCGACCAGGCCTAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTTGCGGCCAGGCCTATGTTGCCTTCCAGGCCAc < 2:500533/150‑1 (MQ=255) aCCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCCGGTTGGCGGCCAGGCAGAGGTTGCCTTCCAGGCCCCCGaa < 2:343239/150‑1 (MQ=255) ccGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAg > 1:1403016/1‑150 (MQ=255) cGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGt < 2:1712766/150‑1 (MQ=255) tCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAgaag > 1:610726/1‑147 (MQ=255) ccAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTgg < 1:871629/150‑1 (MQ=255) ggCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGaa > 2:515511/1‑139 (MQ=255) ggCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGaa < 1:515511/139‑1 (MQ=255) ccAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGc > 2:1638746/1‑95 (MQ=255) ccAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGc < 1:1638746/95‑1 (MQ=255) ccAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCa > 1:1095988/1‑150 (MQ=255) ccAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCa < 1:1746001/150‑1 (MQ=255) ccAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCa > 2:321444/1‑150 (MQ=255) gACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCTGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGcttc < 2:90366/150‑1 (MQ=255) gACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGAGTAGcttc > 1:1307852/1‑150 (MQ=255) gACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCATGCCAGGCCACCGAAGTACGTGGCGATCAGcttc < 1:2371447/150‑1 (MQ=255) gACAGTACCTTGTAGGCCGGCAGGAGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCACCCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGcttc < 2:412182/150‑1 (MQ=255) aCAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGcttct > 1:1103328/1‑150 (MQ=255) gTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCCCCGAAGTACGTGGCGATCAGCTTCTTCa > 2:925714/1‑150 (MQ=255) ccTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACg < 2:2227394/150‑1 (MQ=255) cTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCTGCCGGTTgatg > 2:1611536/1‑88 (MQ=255) gTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGAGCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCATGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTgc < 2:112759/150‑1 (MQ=255) aGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTgcgc > 1:2065869/1‑150 (MQ=255) cGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTg > 1:1043209/1‑150 (MQ=255) cGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTg < 2:189822/150‑1 (MQ=255) aGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAgg < 2:1403016/150‑1 (MQ=255) ggCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGtt < 2:2173237/144‑1 (MQ=255) ggCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGtt > 1:2173237/1‑144 (MQ=255) gCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGAt < 1:1581005/150‑1 (MQ=255) gATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTCCGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGAtgt > 1:633701/1‑150 (MQ=255) gATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGAtgt < 1:1071722/150‑1 (MQ=255) tCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGcttct < 1:2147805/124‑1 (MQ=255) tCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGAtgttg < 2:665671/150‑1 (MQ=255) tCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGCCCAgg > 1:1227606/1‑78 (MQ=255) tCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGCCCAgg < 2:1227606/78‑1 (MQ=255) cGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGAtgttgt < 1:1156443/150‑1 (MQ=255) agaATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAGTTACGTTGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAg > 2:1871941/1‑150 (MQ=255) gaATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGaa < 1:1107636/138‑1 (MQ=255) gaATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGaa > 2:1107636/1‑138 (MQ=255) gTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGt > 1:1421264/1‑150 (MQ=255) tGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCa > 2:57554/1‑150 (MQ=255) tGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTAGAGCTCCGATTATTCAAAGGCGCGCGTGGAAGGAGGTTGTAGACGCGTTCa > 2:2070067/1‑150 (MQ=255) ggTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCAt < 2:1752070/150‑1 (MQ=255) tACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAg < 2:1060437/150‑1 (MQ=255) tGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGtt < 2:874131/68‑1 (MQ=255) tGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGtt > 1:874131/1‑68 (MQ=255) tGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCg > 2:2240250/1‑150 (MQ=255) gCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGt > 2:991990/1‑150 (MQ=255) cgcCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCa < 2:2065869/150‑1 (MQ=255) gcCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAg > 2:1053037/1‑150 (MQ=255) gAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCt > 1:1323098/1‑150 (MQ=255) aCCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTgg < 2:2216793/150‑1 (MQ=255) ccAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCCGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATTGGCGTTTTTCCAGTCCTggg > 1:896421/1‑150 (MQ=255) tCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAgc < 1:49143/150‑1 (MQ=255) gTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGaa > 1:1569315/1‑60 (MQ=255) gTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGaa < 2:1569315/60‑1 (MQ=255) gCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTggg < 1:2070067/150‑1 (MQ=255) cAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTCGAAGGATGTTGTAGCCGCGTTCATAGGCGTTTTTCCAGTCCTGGGCCAGCGCCTgcgc > 2:2259166/1‑150 (MQ=255) aGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCg > 1:1563200/1‑150 (MQ=255) ggCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGa < 2:1043209/150‑1 (MQ=255) aTCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGAGGAt > 1:2219891/1‑150 (MQ=255) aTCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGAGGAt < 2:2100821/150‑1 (MQ=255) tCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGAGGATg > 1:2159689/1‑150 (MQ=255) aaCCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGAGGATggg > 2:1522926/1‑150 (MQ=255) ccGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGAGGATGGGtt < 1:2240250/150‑1 (MQ=255) cGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGGAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGAGGATGGGTTc > 2:1747330/1‑150 (MQ=255) ggCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGAGGATGGGTTCa > 2:2038448/1‑150 (MQ=255) | GCAGCCCCAGGGTCTTGCCCAAATCACAAGGCGAGGCGTTGCGACCGTCGACCAGGCCCAGCGACAGTACCTTGTAGGCCGGCAGGCGATCGAGAATGGTCTGGTACTGCTCGGGCGCCTGAACCAGATCGACGTGCAGGCCATCAACCGGCAGGTTGGCGGCCAGGCCGAGGTTGCCTTCCAGGCCACCGAAGTACGTGGCGATCAGCTTCTTCAACGGTGCGCGTTGAAGGATGTTGTAGACGCGTTCATAGGCGTTTTTCCAGTCCTGGGGCAGCGCCTGGGCGAGGATGGGTTCA > NC_002947/5260973‑5261271 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |