| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,273,458 | C→G | 5.7% | A186G (GCC→GGC) | rlmG → | ribosomal RNA large subunit methyltransferase G |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,273,458 | 0 | C | G | 5.7% | 306.9 / 7.0 | 98 | A186G (GCC→GGC) | rlmG | ribosomal RNA large subunit methyltransferase G |
| Reads supporting (aligned to +/- strand): ref base C (50/42); new base G (4/2); total (54/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.34e-01 | |||||||||||
TGCGCAGGTGATTGCAGGGGCGATGATCAAGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGGCCGTGCGCGGGTG > NC_002947/5273312‑5273606 | tGCGCAGGTGATTGCAGGGGCGATGATCAAGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGCAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCaa < 2:342265/150‑1 (MQ=255) gcAGGTGATTGCAGGGGCGATGATCAAGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTc > 1:1758142/1‑150 (MQ=255) cAGGTGATTGCAGGGGCGATGATCAAGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTcc < 2:196830/150‑1 (MQ=255) cAGGTGATTGCAGGGGCGATGATCAAGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTcc < 2:196792/150‑1 (MQ=255) aGGTGATTGCAGGGGCGATGATCAAGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACGGAAAAAGGCCCGTTTGCTGACAGCAACGGTGGCCGAGCGGCCGCGCGCCAAGTtcc < 2:400129/150‑1 (MQ=255) ggTGATTGCAGGGGCGATGATCAAGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGACGCTCGCCTAGTcccc > 2:1946038/1‑150 (MQ=255) gATTGCAGGGGCGATGATCAAGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTa > 1:1153093/1‑150 (MQ=255) cAGGGGCGATGATCAAGCCCCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCa < 2:1755679/150‑1 (MQ=255) gggCGATGATCAAGCACCTGCCGCGCGCGGCCGGTGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAgct > 2:1840731/1‑150 (MQ=255) gggCGATGATCAAGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAgct > 1:977766/1‑150 (MQ=255) gatgatCAAGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTa > 1:1453196/1‑150 (MQ=255) atCAAGCGCCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCCCTGGTGGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGc > 1:149057/1‑150 (MQ=255) atCAAGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGc > 2:939247/1‑150 (MQ=255) atCAAGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGc < 1:100012/150‑1 (MQ=255) tCAAGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGcc > 1:1248238/1‑150 (MQ=255) aaGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTc > 2:2111475/1‑150 (MQ=255) aaGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTc > 1:583803/1‑150 (MQ=255) cgccggCCGCGCGCGGCAGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGAc > 1:1009719/6‑150 (MQ=255) gccggCCGCGCGCGGCAGGTGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGAcg > 1:1980531/5‑150 (MQ=255) aCCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCATACTTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGAcg > 1:1234286/1‑150 (MQ=255) gcgGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCTCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCactt < 1:1946038/150‑1 (MQ=255) gccggcGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCacttgac < 2:2377651/150‑1 (MQ=255) ggcGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCacttgacttg < 1:1711901/150‑1 (MQ=255) cTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGGTCGGACTGAAAAAGGCCCGTTTGCTGTACTCATCAGCGGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑c < 1:2223190/150‑1 (MQ=255) tGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGGTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑cc > 1:1543623/1‑150 (MQ=255) aTGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCacttgacttg > 1:549335/1‑141 (MQ=255) aTGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCacttgacttg < 2:549335/141‑1 (MQ=255) tgcagaAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTATCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACg > 1:2399611/4‑150 (MQ=255) tGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTgg > 2:956607/1‑141 (MQ=255) tGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTgg < 1:956607/141‑1 (MQ=255) ggAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGc < 2:1009719/150‑1 (MQ=255) gagaAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGcc > 2:1958360/1‑150 (MQ=255) gTACATCGGCCCCGTACAGGCGTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACgt > 2:101260/1‑150 (MQ=255) aTCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTc > 2:1106152/1‑150 (MQ=255) aTCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTc > 2:1336542/1‑150 (MQ=255) ccGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTg > 1:1247809/1‑150 (MQ=255) gTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGaa < 2:149057/150‑1 (MQ=255) aGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACATCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACg > 1:111499/1‑126 (MQ=255) aGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACg < 2:111499/126‑1 (MQ=255) ggCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCt < 2:606692/150‑1 (MQ=255) ggCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCt > 2:1358121/1‑150 (MQ=255) gCTTCGCTGGCACTGCAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTg < 2:1676517/150‑1 (MQ=255) gCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGTCTg < 1:2111475/150‑1 (MQ=255) gCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTg > 1:1368037/1‑150 (MQ=255) cTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTgg < 2:1453196/150‑1 (MQ=255) cTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATc < 2:1758142/150‑1 (MQ=255) cTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATc < 1:1106152/150‑1 (MQ=255) aCTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGAc > 2:1671621/1‑150 (MQ=255) aCTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCACCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGAc > 2:292128/1‑150 (MQ=255) tGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGAcgc > 1:971558/1‑150 (MQ=255) tGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGACTCGACGAGCCGGCCCTTGACTTGGTCAA‑CCACGCAAACGTATTCTGCCGTGAAGTCCGGGATATCGGGAcgc < 2:1234286/150‑1 (MQ=255) aaaaaGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTcccc < 1:1166934/56‑1 (MQ=255) aaaaaGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTcccc > 2:1166934/1‑56 (MQ=255) aaaGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTc < 1:1287663/76‑1 (MQ=255) aaaGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTc > 2:1287663/1‑76 (MQ=255) aaGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCg > 1:1820143/1‑150 (MQ=255) aGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAAc < 2:1043520/110‑1 (MQ=255) aGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAAc > 1:1043520/1‑110 (MQ=255) aGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACGTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGt < 2:2147815/150‑1 (MQ=255) gCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTtc < 2:289295/150‑1 (MQ=255) ccGTGTGCTGACAGCAACGGTGGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTtcct > 2:1241046/1‑150 (MQ=255) gTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTtcctcc < 1:1358121/150‑1 (MQ=255) gTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTtcctcc < 1:1840731/150‑1 (MQ=255) tttGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAACCCACG‑GGAGTTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTccc > 1:1954338/1‑150 (MQ=255) tGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATc > 2:494139/1‑150 (MQ=255) gACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCt < 2:1248238/150‑1 (MQ=255) aCAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTc > 1:1388570/1‑84 (MQ=255) aCAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTc < 2:1388570/84‑1 (MQ=255) cAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTAc < 2:1247809/150‑1 (MQ=255) cAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTAc < 1:1336542/150‑1 (MQ=255) gCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCa < 2:1543623/150‑1 (MQ=255) aaCGGTTGCCGAGCGGCCGCTGGCCAAGTCCCGCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACg > 2:1324428/1‑150 (MQ=255) aaCGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACg > 1:2008364/1‑150 (MQ=255) ggTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCaa < 1:1241046/150‑1 (MQ=255) gTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAAc > 2:199204/1‑150 (MQ=255) ttGGCGAGCGGCCGCTCGGCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGGCCCGGCACTTGACTTgg > 1:1978184/1‑72 (MQ=38) ttGGCGAGCGGCCGCTCGGCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAAcc > 1:130098/1‑150 (MQ=255) ttGGCGAGCGGCCGCTCGGCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGAGCCGGCACTTGACTTGTTCAA‑CGACTCCAACGTGTGCTGCCGGGAAGGCCTGGATATGGGGACGCGGGCGCTCGCAGCCCATCTACCACGCAAcc > 1:1931725/1‑150 (MQ=255) ttGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAAcc < 2:977766/150‑1 (MQ=255) gCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTc < 2:1153093/150‑1 (MQ=255) cGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCgg > 1:2023833/1‑150 (MQ=255) cGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCgg > 1:1190282/1‑150 (MQ=255) cGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGGTCCTCCCGCATCTACCACGCAACCTCgg > 2:496217/1‑150 (MQ=255) gAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTgg > 1:377661/1‑103 (MQ=255) gAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTgg < 2:377661/103‑1 (MQ=255) cGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTGGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGGCCGt < 2:512908/150‑1 (MQ=255) gCCGCTCGGCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTg < 2:1101431/97‑1 (MQ=255) gCCGCTCGGCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTg > 1:1101431/1‑97 (MQ=255) gCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGGCCGTgc > 1:1724939/1‑150 (MQ=255) gCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGGCCGTGcgcg > 1:2094956/1‑150 (MQ=255) cTCGGCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGGCCGTGCGCgg < 2:130098/150‑1 (MQ=255) tCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTgg > 1:997451/1‑93 (MQ=255) tCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTgg < 2:997451/93‑1 (MQ=255) tCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGGAACCTCGGCCGTGCGCggg > 2:1583404/1‑150 (MQ=255) cGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGGCCGTGCGCGGGt < 2:2023833/150‑1 (MQ=255) gCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTg < 2:802247/90‑1 (MQ=255) gCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTg > 1:802247/1‑90 (MQ=255) gCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGGCCGTGCGCGGGTg > 1:2137911/1‑150 (MQ=255) | TGCGCAGGTGATTGCAGGGGCGATGATCAAGCACCTGCCGCGCGCGGCCGGCGACCTGATGGAGAAGTACATCGGCCCCGTACAGGCTTCGCTGGCACTGAAAAAGGCCCGTTTGCTGACAGCAACGGTTGCCGAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAA‑CCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGGCCGTGCGCGGGTG > NC_002947/5273312‑5273606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |