| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 444,596 | T→A | 5.1% | intergenic (+75/‑99) | bioD → / → PP_0367 | dethiobiotin synthetase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 444,596 | 0 | T | A | 5.1% | 541.9 / 12.2 | 176 | intergenic (+75/‑99) | bioD/PP_0367 | dethiobiotin synthetase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (85/80); new base A (4/5); total (90/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01 | |||||||||||
Only 100 of 181 total aligned reads displayed.
GGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGACATGGAAATCACC > NC_002947/444447‑444745 | gggCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGttt > 1:1219159/1‑150 (MQ=255) gggTGCCCAAGCGCAAGCAGGCCAGGGCCGACATGGGGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTAccc < 1:614851/150‑1 (MQ=255) gTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCcgc < 2:1308963/150‑1 (MQ=255) ccAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaag > 1:2134865/1‑150 (MQ=255) ccAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaag > 2:228227/1‑150 (MQ=255) aaGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaagaa < 1:32147/150‑1 (MQ=255) tCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCa > 2:347439/1‑150 (MQ=255) aaGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGt > 2:1975628/1‑150 (MQ=255) gCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGc > 2:1197269/1‑150 (MQ=255) aGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAg < 1:287956/150‑1 (MQ=255) ggCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAgg < 2:1985830/150‑1 (MQ=255) gCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCcgc < 2:1947039/132‑1 (MQ=255) gCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCcgc > 1:1947039/1‑132 (MQ=255) ccAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGaa > 2:2192728/1‑150 (MQ=255) ccAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACACGCGAAGATGCCAGTGCAGGaa < 2:643575/150‑1 (MQ=255) ccGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCa > 2:1619869/1‑150 (MQ=255) cGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGc < 2:1206697/138‑1 (MQ=255) aCATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAgg > 2:2004980/1‑150 (MQ=255) aCATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAgg > 1:822801/1‑150 (MQ=255) aGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTgg < 1:518874/150‑1 (MQ=255) aTCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCAt < 2:1286377/150‑1 (MQ=255) tCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATAcc < 1:1410061/129‑1 (MQ=255) tGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGa > 2:1746253/1‑150 (MQ=255) gCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaaga < 2:2325021/108‑1 (MQ=255) gCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaaga > 1:2325021/1‑108 (MQ=255) gCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAg < 1:1803496/150‑1 (MQ=255) cTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCAt > 1:2202778/1‑150 (MQ=255) cTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCAt > 2:458899/1‑150 (MQ=255) ggATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTa < 1:1975628/150‑1 (MQ=255) gATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAg > 2:769087/1‑150 (MQ=255) aTCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAgg < 2:455159/150‑1 (MQ=255) tgctgGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCga < 2:278851/94‑1 (MQ=255) tgctgGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGAt < 1:2004980/150‑1 (MQ=255) tgGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaag > 2:2406316/1‑93 (MQ=255) ttAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATAc < 1:1508102/107‑1 (MQ=255) ttAGTCTGGGGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACg < 2:541936/150‑1 (MQ=255) aGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACggg < 2:884316/150‑1 (MQ=255) gTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaaga < 1:1351089/87‑1 (MQ=255) gTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaaga > 2:1351089/1‑87 (MQ=255) tCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGa < 2:2257235/127‑1 (MQ=255) tCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGcc > 2:399306/1‑150 (MQ=255) tCTGTTGCAGGCCCGGCCTCTTCCCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGAGAAGAAGCCCCGGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGcc > 1:70457/1‑150 (MQ=39) tGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACg < 1:581041/144‑1 (MQ=255) tGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACg > 2:581041/1‑144 (MQ=255) tGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCtt > 2:220177/1‑150 (MQ=255) tGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCtt > 2:1459447/1‑150 (MQ=255) tGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCtt > 1:1530839/1‑150 (MQ=255) gTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAg < 1:1935056/94‑1 (MQ=255) gCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGcccc > 2:150188/1‑150 (MQ=255) ccGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGGGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTa > 1:2407246/1‑150 (MQ=255) cGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAg > 1:2178946/1‑150 (MQ=255) cGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAg > 2:2302176/1‑150 (MQ=255) cGGCCTCTTCGCGGGTAAAACCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAg > 2:2301718/1‑150 (MQ=255) ggCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGc > 2:1018050/1‑150 (MQ=255) ggCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGc < 1:482274/150‑1 (MQ=255) ccTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCAt < 1:802919/116‑1 (MQ=255) ccTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCAt > 2:802919/1‑116 (MQ=255) ttCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGttt < 2:1136005/150‑1 (MQ=255) gcgGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAggg > 1:328591/1‑114 (MQ=255) gggTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAAtt < 1:399306/150‑1 (MQ=255) ggTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTg > 1:2017123/1‑150 (MQ=255) gTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCAAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTgg < 1:2111362/150‑1 (MQ=255) gTAAACCCGCTCCCACGAGGGAACGCATACCGTTGTGGGCGACGGCCAACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTgg < 1:1467352/150‑1 (MQ=255) tAAACCCGCTCCTACGAGGGAACGCATCCCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTggg < 1:536105/150‑1 (MQ=255) tAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTggg < 1:125434/150‑1 (MQ=255) tAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTggg < 1:228227/150‑1 (MQ=255) tAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTggg < 1:458899/150‑1 (MQ=255) tAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGACATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTggg < 2:2217014/150‑1 (MQ=255) cccGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTg > 2:547193/1‑150 (MQ=255) ccGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCGATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAGTTGGGGCTGt > 1:365474/1‑150 (MQ=255) tCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGt > 1:894468/1‑150 (MQ=255) gggAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGACCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGc < 1:2225869/150‑1 (MQ=255) gAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGt > 1:1437715/1‑150 (MQ=255) gAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATACAGCGt < 2:489612/150‑1 (MQ=255) ccaaTACCGTCGTGGCCGCGGGTTCACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCaa < 2:2029405/147‑1 (MQ=255) gCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAAt > 2:599498/1‑150 (MQ=255) gCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAAt < 1:769087/150‑1 (MQ=255) cATACCGTTGTGGGCGCGGGTTTACCCGCGAATAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATg > 2:1905175/1‑150 (MQ=255) tACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGTCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGa < 1:2302176/150‑1 (MQ=255) tACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGGCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGa < 1:2301718/150‑1 (MQ=255) cGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACgg < 2:1604443/90‑1 (MQ=255) gTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTg < 2:465752/118‑1 (MQ=255) ttGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCt > 2:1374537/1‑150 (MQ=255) ttGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCt > 1:361314/1‑150 (MQ=255) ttGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCt > 1:1614224/1‑150 (MQ=255) ttGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCt < 1:1018050/150‑1 (MQ=255) tcttcttcgcgGGTAAACCCGCGCAGAAGCTAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGCCTTTAAACGGGCCTTTTCACGCCTACGCTGGTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCt < 1:420653/143‑1 (MQ=255) ttcttcgcgGGTAAACCCGCGCAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGa > 2:420653/6‑150 (MQ=255) gtgGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGa < 2:361314/150‑1 (MQ=255) tcttcgcgGGTAAACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGa < 2:1434029/138‑1 (MQ=255) gcgcGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCttt < 2:1502622/88‑1 (MQ=255) gcgcGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCttt > 1:1502472/1‑88 (MQ=255) cgcgtatttATCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGACATgg < 1:1707669/144‑1 (MQ=255) cgcgGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGACATgg < 1:1197269/150‑1 (MQ=255) cgcgGGTAAACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGACATgg < 2:2115282/150‑1 (MQ=255) gcgGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCaa > 1:2355974/1‑40 (MQ=255) gcgGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCaa < 2:2355974/40‑1 (MQ=255) gcgGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCt > 1:1049328/1‑142 (MQ=255) ggTTTACCCGCGACGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGACATGGAAAt > 2:1244196/1‑150 (MQ=255) tACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGACATGGAAATCAcc < 1:547193/150‑1 (MQ=255) | GGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGACATGGAAATCACC > NC_002947/444447‑444745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |