| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,338,086 | A→G | 7.6% | intergenic (+45/‑239) | PP_4696 → / → PP_mr53 | nitrogen regulation protein NR(I)/CrcZ ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,338,086 | 0 | A | G | 7.6% | 236.9 / 7.2 | 81 | intergenic (+45/‑239) | PP_4696/PP_mr53 | nitrogen regulation protein NR(I)/CrcZ ncRNA |
| Reads supporting (aligned to +/- strand): ref base A (36/38); new base G (3/3); total (39/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.47e-01 | |||||||||||
GAGACCGAACTGGCACGCAAGCTCGGCGTAAGCCGCAAGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACGAAATTGCGAC > NC_002947/5337937‑5338234 | gagaccgaACTGGCACCCAAGCTCGGCGTAAGCCGCAAGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTgaga < 2:566493/150‑1 (MQ=255) cgaACTGGCACGCAAGCTCGGCGTAAGCCGCAAGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAg > 1:1203857/1‑150 (MQ=255) cTGGCACGCAAGCTCGGCGTAAGCCGCAAGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGcgcc < 2:557311/150‑1 (MQ=255) aGCTCGGCGTAAGCCGCAAGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCgcgggcgg < 2:1824391/150‑1 (MQ=255) gCTCGGCGTAAGCCGCAAGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCgcggc < 2:1283815/150‑1 (MQ=255) cTCGGCGTAAGCCGCAAGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGGCCGAGCGCCGCGCGGgcggcg > 2:2105477/1‑150 (MQ=255) tCGGCGTAAGCCGCAAGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGgcgc > 1:408004/1‑150 (MQ=255) ggCGTAAGCCGCAAGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTc < 2:153828/150‑1 (MQ=255) gCGTAAGCCGCAAGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCg < 1:2285340/150‑1 (MQ=255) cGTAAGCCGCAAGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCgg < 2:1538415/150‑1 (MQ=255) aaGCCGCAAGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGAGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGGCCGAGCGCCGCGCGGGCGGCGCTCGGTCt < 1:2105477/150‑1 (MQ=255) ccGCAAGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTcac > 2:177741/1‑150 (MQ=255) cGCAAGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTcaca > 2:1631517/1‑150 (MQ=255) aaGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGgc < 2:69252/150‑1 (MQ=255) aaGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGgc > 2:809957/1‑150 (MQ=255) gTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGgcgc < 2:240764/150‑1 (MQ=255) gTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGCCT‑GTGAGGCCGAGCGCCGCGCGGGCGGCGCTCGGTCTcaccgacgc < 2:255329/150‑7 (MQ=37) ccTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGa < 1:177741/150‑1 (MQ=255) cTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCTCTGaa > 2:844637/1‑150 (MQ=255) tgtgGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCgg > 1:453842/1‑133 (MQ=255) tgtgGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCgg < 2:453842/133‑1 (MQ=255) tgGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCTCTGAACgt < 1:844637/150‑1 (MQ=255) ggAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACgtgt > 2:864128/1‑150 (MQ=255) aaCGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCGAGCGA‑TCCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCa < 1:1978636/150‑1 (MQ=39) aCGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCac > 2:1751898/1‑150 (MQ=255) ccgccAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCacgac < 1:1300222/150‑1 (MQ=255) gccAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCAcgacga > 2:2135972/1‑150 (MQ=255) ccAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAAc < 2:2113315/137‑1 (MQ=255) ccAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAAc > 1:2113315/1‑137 (MQ=255) ccAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGaa > 1:2358874/1‑150 (MQ=255) ccAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGaa < 2:408004/150‑1 (MQ=255) cAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAac < 1:1751898/150‑1 (MQ=255) gcCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGaa < 2:210375/145‑1 (MQ=255) gcCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGaa > 1:210375/1‑145 (MQ=255) cTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCa < 1:1493615/150‑1 (MQ=255) cTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCa > 1:254123/1‑150 (MQ=255) tGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAg < 2:2358874/150‑1 (MQ=255) ggCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGt < 1:1631517/150‑1 (MQ=255) cccACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAacac > 2:2060803/1‑150 (MQ=255) cccACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAacac < 1:2060803/150‑1 (MQ=255) ccACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGa > 2:1970278/1‑82 (MQ=255) ccACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGa < 1:1970278/82‑1 (MQ=255) ccACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAAcacc > 1:236424/1‑150 (MQ=255) cACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTca < 1:2369974/108‑1 (MQ=255) cACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTca > 2:2369974/1‑108 (MQ=255) cACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGGACACCCCAGGTAAcacct > 1:2092632/1‑150 (MQ=255) aCGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAAcacctc > 2:580545/1‑150 (MQ=255) cgcAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGGGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAAcacctcacct > 1:1138277/1‑150 (MQ=255) gcAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACacctcacctc > 2:49502/1‑150 (MQ=255) aaGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACTCCCCAGGTAACACCTCACCTccc < 2:1104383/150‑1 (MQ=255) aaGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTccc < 2:1203857/150‑1 (MQ=255) aaCGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTaaaa > 2:1581144/1‑150 (MQ=255) aaCGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTaaaa > 1:387597/1‑150 (MQ=255) gCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGGCCGAGCGCCGCGCGGGCGGCGCTc < 1:1297748/84‑1 (MQ=37) gCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGGCCGAGCGCCGCGCGGGCGGCGCTc > 2:1297748/1‑84 (MQ=37) cTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCt < 1:49502/150‑1 (MQ=255) ccAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGtt < 1:580545/150‑1 (MQ=255) cAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCa < 1:1409980/104‑1 (MQ=255) cAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCa > 2:1409980/1‑104 (MQ=255) cAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGGACACCCCAGGTAACACCTCAAAAAACGAAAAAATCTGTTa < 2:2092632/150‑1 (MQ=38) cAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAACTCTGTTa > 1:1715701/1‑150 (MQ=255) aGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACAccc > 1:361100/1‑115 (MQ=255) aGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACAccc < 2:361100/115‑1 (MQ=255) gCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTAcc > 2:464254/1‑150 (MQ=255) aTAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAg < 1:1581144/150‑1 (MQ=255) ccACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTc > 2:1827242/1‑150 (MQ=255) ccACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTc > 1:2356784/1‑150 (MQ=255) aCCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTccg > 2:779317/1‑150 (MQ=255) aCCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTccg > 1:2228747/1‑150 (MQ=255) tACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACgtgt > 1:621949/1‑86 (MQ=255) tACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACgtgt < 2:621949/86‑1 (MQ=255) aCGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGt < 1:2328541/150‑1 (MQ=255) cgcaccgcacGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTc > 2:49791/1‑67 (MQ=255) cgcaccgcacGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTc < 1:49791/67‑1 (MQ=255) gcaccgcacGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTaa < 2:1701327/150‑1 (MQ=255) accgcacGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAAcacctca < 1:1076557/109‑1 (MQ=255) accgcacGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAAcacctca > 2:1076557/1‑109 (MQ=255) ccgcAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGa < 2:254123/150‑1 (MQ=255) ctgTGAGGCCGAGCGCCGCGCGGGCGGCGCTCGGTCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACGAAAt > 2:185857/3‑150 (MQ=39) gTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACa < 2:206682/122‑1 (MQ=255) gTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACa > 1:206682/1‑122 (MQ=255) gTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACGAAATTg < 2:2356784/150‑1 (MQ=255) gaCCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACGAAATTGCGAc > 1:9728/1‑150 (MQ=255) | GAGACCGAACTGGCACGCAAGCTCGGCGTAAGCCGCAAGTGCCTGTGGGAACGCCGCCAGCGCCTGGGCATCCCACGGCGCAAGAGCAACGCTACCAGCGAATAACCCACCTACGCACCGCACGCCGCAGCCTATGCGGCGTCG‑GTGAGACCGAGCGCCGCCCGCGCGGCGCTCGGCCTCACAGGCGCTGAACGTGTCACGACGAACACCCCAGGTAACACCTCACCTCCCGTAAAAATCTGTTACCCAAGCTTTCCGCCGTAACAGTCCCCGAGGCGTACGGTAACGAAATTGCGAC > NC_002947/5337937‑5338234 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |