| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,359,112 | T→A | 5.9% | E402D (GAA→GAT) | nusA ← | transcription termination/antitermination factor L |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,359,112 | 0 | T | A | 5.9% | 205.9 / 4.1 | 69 | E402D (GAA→GAT) | nusA | transcription termination/antitermination factor L |
| Reads supporting (aligned to +/- strand): ref base T (34/30); new base A (2/2); total (37/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.47e-01 | |||||||||||
CGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTCACCGGTTTC > NC_002947/5358965‑5359261 | cGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTCGTCAACAAACGGTTCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTc < 1:2227726/150‑1 (MQ=255) ttCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCaaa < 1:2344943/150‑1 (MQ=255) cgccAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATc > 1:1284556/1‑150 (MQ=255) cAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGAt < 1:322910/150‑1 (MQ=255) gTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCaaa > 1:102599/1‑138 (MQ=255) gTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCaaa < 2:102599/138‑1 (MQ=255) gTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGtt < 1:1575230/150‑1 (MQ=255) gTCTTTGTCCAGTCCCGCAATGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGtt < 2:448123/150‑1 (MQ=255) cATGCCCTCAAGGGAGAGCAGGTCCTCGGCCGGGTGGGCGTCTGCCAGTCTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGCCTTCGCCACACCCATCGATATTCAGCCTttc > 2:15047/1‑150 (MQ=255) gCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATttcttc < 1:1792268/150‑1 (MQ=255) ccTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGAAGACATCGTCaat > 1:2295847/1‑123 (MQ=255) ccTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGAAGACATCGTCaat < 2:2295847/124‑2 (MQ=255) ccTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGCAGCTGATTTAAGATGATGTCGTCACAGCCATCGATGTTGAGCATTTCTTCCa > 2:1170921/1‑150 (MQ=255) ccTCAAGGGAGAGCAGGTCTTCGACCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCa > 1:326321/1‑150 (MQ=255) cTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGc < 1:2137137/139‑1 (MQ=255) cTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGc > 2:2137137/1‑139 (MQ=255) tCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGGTGTTGAGCATTTCTTCCAAc > 1:1199373/1‑150 (MQ=255) aaGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTc < 1:1987234/114‑1 (MQ=255) aaGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTc > 2:1987234/1‑114 (MQ=255) gagCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAAACAACGCTATGGCTCTGGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTa < 1:2097452/150‑1 (MQ=255) agCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAg < 2:1022687/150‑1 (MQ=255) ggTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCaa < 2:1929760/150‑1 (MQ=255) ggTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCaa > 1:555795/1‑150 (MQ=255) gTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAAt > 1:2384594/1‑150 (MQ=255) gTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAAt > 2:900267/1‑150 (MQ=255) ttCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATttc < 2:2384594/150‑1 (MQ=255) ttCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATttc < 2:1992870/150‑1 (MQ=255) cGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATttctt < 1:2218222/150‑1 (MQ=255) gCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCaa > 1:1589082/1‑128 (MQ=255) gCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCaa < 2:1589082/128‑1 (MQ=255) gggTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCaaa < 1:1791455/98‑1 (MQ=255) gggTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAgg < 1:2184827/150‑1 (MQ=255) gggTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAAAGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCaaa > 2:1791455/1‑98 (MQ=255) ggTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACTTAGGCGATTTCTTCAAGGc > 2:483415/1‑150 (MQ=255) cAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGAAGACATCGTCaat > 2:216492/1‑83 (MQ=255) cAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGAAGACATCGTCaat < 1:216492/84‑2 (MQ=255) tttttCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTtcgtc < 2:1284556/150‑1 (MQ=255) ttcttcGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGAc < 2:609336/150‑1 (MQ=255) cttcGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCa > 2:1882423/1‑150 (MQ=255) gATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTg < 1:2319079/121‑1 (MQ=255) gATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTg > 2:2319079/1‑121 (MQ=255) tGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCa > 2:662335/1‑150 (MQ=255) tGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGAAGATGTCTTCGTCAAAGCCATCGATGGTGAGCATTTCTTCCAACGGGACGTAGGCAATTTCTTCAAGAATGGTGAAGCCTTCGTCGTCCAGCGCTTgtgtcg > 2:1123094/1‑145 (MQ=255) tGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGctcct > 2:1433296/1‑150 (MQ=255) aaaCGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACt > 1:1924826/1‑150 (MQ=255) aaaCGGTCCTTGACTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCAGCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATATCTTCAAGGCTGGTGAAGCCATCGTCAACCAGCACTTGGGCCAGCTCCTCGTCGACt > 1:261946/1‑150 (MQ=255) ttGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTcc > 2:2168769/1‑150 (MQ=255) ttGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTcc > 2:852183/1‑150 (MQ=255) cTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGa < 1:2168769/150‑1 (MQ=255) gAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGa > 2:463646/1‑150 (MQ=255) gcgcGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGaaa < 2:555795/150‑1 (MQ=255) gcgcGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTCGTGAAGCCTTCGTCGACCACCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGaaa < 2:851030/150‑1 (MQ=255) gAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCg > 1:165748/1‑139 (MQ=255) gAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCg < 2:165748/139‑1 (MQ=255) gCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGAc > 1:167532/1‑97 (MQ=255) gCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGAc < 2:167532/97‑1 (MQ=255) cTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAg < 1:15047/150‑1 (MQ=255) taaTTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGTCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAgg > 2:231771/3‑150 (MQ=255) aTTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGTTCCTCGTCGACTTCCAGGTCCTCGATGAAATTGCGCacgct > 2:1112014/1‑146 (MQ=255) ttGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCtcgtc < 1:1103959/116‑1 (MQ=255) ttGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCtcgtc > 2:1103959/1‑116 (MQ=255) ttGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTACGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATg > 1:1260113/1‑150 (MQ=255) gACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTc > 1:27977/1‑150 (MQ=255) gATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTgc < 2:225826/137‑1 (MQ=255) gATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTgc > 1:225826/1‑137 (MQ=255) gATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTCAcc > 2:1164624/1‑150 (MQ=255) aTGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTgcgc < 2:1698558/138‑1 (MQ=255) aTGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTgcgc > 1:1698558/1‑138 (MQ=255) cTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTCACCGGttt > 1:1199066/1‑150 (MQ=255) ttCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTCACCGGTTTc > 2:1275144/1‑150 (MQ=255) ttCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCATTAGGCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTCACCGGTTTc > 1:161427/1‑150 (MQ=255) | CGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGGTGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTCACCGGTTTC > NC_002947/5358965‑5359261 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |