| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,377,746 | C→A | 8.6% | A176S (GCG→TCG) | grpE ← | heat shock protein GrpE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,377,746 | 0 | C | A | 8.6% | 437.7 / 18.0 | 139 | A176S (GCG→TCG) | grpE | heat shock protein GrpE |
| Reads supporting (aligned to +/- strand): ref base C (74/52); new base A (6/6); total (81/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01 | |||||||||||
Only 100 of 150 total aligned reads displayed.
CGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGCATGGCCATGGCCTGGTGGTGCTCAGGGTTGAAC > NC_002947/5377597‑5377894 | gatgatTTTACCCATGTTAACTCTCCCGGAAATCAGAGATTTTAGCAGCGACTACTTTGCCCAACTGCTTTAATACAAG‑CCTCTAGATGACCGAGAGGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGAAAGAGGGTTGCTCcgcg > 1:2351082/1‑150 (MQ=255) ccATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGAGCGCGgcgcaac < 2:2112458/150‑4 (MQ=255) cATGTTAACTCTCCCGAAACTTGCATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTg < 1:2308283/150‑1 (MQ=255) cATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGAGCGCGgcgcaacc < 1:2118634/150‑5 (MQ=255) aTGTTAACTCTCCCGAAACCTGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGc > 1:188361/1‑150 (MQ=255) tctcCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGaccacc > 1:896479/1‑150 (MQ=255) tctcCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGaccacc > 2:2281920/1‑150 (MQ=255) tctcCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGaccacc > 1:989615/1‑150 (MQ=255) tctcCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGaccacc > 1:192806/1‑150 (MQ=255) ccGAAACTTGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGcgccgc > 2:521856/1‑124 (MQ=255) ccGAAACTTGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGAccaccacca > 1:254619/1‑150 (MQ=255) cGAAACTTGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCAt < 2:2396134/150‑1 (MQ=255) cGAAACTTGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCAt > 1:176259/1‑150 (MQ=255) gAAACTTGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATg > 1:710533/1‑150 (MQ=255) aaaCTTGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATgg < 2:157468/150‑1 (MQ=255) ttGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCggg > 1:1420308/1‑150 (MQ=255) tGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCgggg < 2:1273485/150‑1 (MQ=255) aaTTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGgcg < 2:2297686/150‑1 (MQ=255) gTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGgcg > 1:1775150/1‑144 (MQ=255) tAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAgg > 2:883471/1‑150 (MQ=255) gcagcGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGAGCGCGgcgcaac < 2:1329699/117‑4 (MQ=255) gcagcGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGAGCGCGgcgcaac > 1:1329699/1‑114 (MQ=255) gcagcGACTACTTTGGCCAACTGAGGTACTACTTGAAGACTTTA‑CTCCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAggcg < 1:539460/150‑1 (MQ=255) cagcGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAggcgg > 2:911689/1‑150 (MQ=255) agcGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAggcggc < 2:1780767/150‑1 (MQ=255) gcGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGcc < 2:2351082/150‑1 (MQ=255) gcGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGACTTGCTGACCACCACCATGCCGGGGCCCACCAggcggct > 2:465657/1‑149 (MQ=255) cGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCg < 2:989615/150‑1 (MQ=255) gACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCg > 2:1047521/1‑105 (MQ=255) gACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCg < 1:1047521/105‑1 (MQ=255) ctTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTcagc > 1:1935800/1‑150 (MQ=255) tttGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGcc < 1:1564277/142‑1 (MQ=255) tttGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTcagca > 1:644419/1‑150 (MQ=255) tttGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTcagca > 2:1968805/1‑150 (MQ=255) tttGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTcagca < 1:2281920/150‑1 (MQ=255) tGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAgg < 2:188361/150‑1 (MQ=255) gCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGAAGGCGGCCGTTcagccgcta > 2:262545/1‑145 (MQ=255) ccAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCgca < 1:2345164/127‑1 (MQ=255) ccAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCgca > 2:2345164/1‑127 (MQ=255) ccAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTcagc > 1:547941/1‑144 (MQ=255) ccAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTcagc < 2:547941/144‑1 (MQ=255) ccAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTaa > 1:470680/1‑150 (MQ=255) aaCTGCGGTAATAATTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGGAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAAcc > 1:1632596/1‑150 (MQ=255) gCGGTAATACTTGAACGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTGAACCCAGGTGAGTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTc > 2:695633/1‑150 (MQ=255) ggTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCGCCGATCGAGGGTTGCACCACGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTg < 1:781081/150‑1 (MQ=255) tAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTg < 1:694579/148‑1 (MQ=255) aaTACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGaa < 2:710533/150‑1 (MQ=255) tACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGacca > 1:1579832/1‑96 (MQ=255) tACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGacca < 2:1579832/96‑1 (MQ=255) aCTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTa > 1:608568/1‑135 (MQ=255) aCTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTa < 2:608568/135‑1 (MQ=255) aCTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAacac < 2:1975097/150‑1 (MQ=255) ttGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCgca > 1:1727385/1‑111 (MQ=255) ttGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCgca < 2:1727385/111‑1 (MQ=255) ttGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGt < 2:1935800/150‑1 (MQ=255) tGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGAGCGCGgcgcaac < 2:182591/84‑4 (MQ=255) gAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTc > 1:2383708/1‑150 (MQ=255) aaGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCa > 2:2008411/1‑150 (MQ=255) gA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCt > 1:1238226/1‑150 (MQ=255) cTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCACCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCt > 2:1627041/1‑126 (MQ=255) tAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGac < 2:1514416/75‑1 (MQ=255) tAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGac > 1:1514416/1‑75 (MQ=255) aGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATg > 1:1004219/1‑84 (MQ=255) gATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGt < 1:1658466/108‑1 (MQ=255) gATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGt > 2:1658466/1‑108 (MQ=255) tGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGGGTGGCTCGACCTct < 2:1420308/150‑2 (MQ=255) ccccGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGc > 1:2318222/1‑150 (MQ=255) cccGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCg > 1:386069/1‑150 (MQ=255) ccGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCgc > 2:793649/1‑149 (MQ=255) ccGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCg < 2:2370002/149‑1 (MQ=255) ccGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGt > 2:213825/1‑150 (MQ=255) ccGAAGAATTTCAAGCCTTTTCATGGATCGCGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGt > 2:439784/1‑150 (MQ=255) cGAGGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGtt > 1:1778637/1‑150 (MQ=255) gATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCt > 1:2139271/1‑150 (MQ=255) gATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAAAACGCTGTTTGGCTCGACCTCGGCGTTTTCCt > 1:380215/1‑150 (MQ=255) tttCAAGCCTTTTCATTGATCGAGATTTGCGCCGGGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCTGCGTTTTCCTGc > 2:1355031/1‑150 (MQ=255) aaGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGcatgg > 1:804263/1‑150 (MQ=255) ccTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGt > 1:1846195/1‑117 (MQ=255) ccTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGcatggcca > 2:493161/1‑150 (MQ=255) ttttCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAAAACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGcatggccatg < 2:380215/150‑1 (MQ=255) aTTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGtt > 1:2096750/1‑111 (MQ=255) aTTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGtt < 2:2096750/111‑1 (MQ=255) aTTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGCATGGCCATGGCCtg < 1:883471/150‑1 (MQ=255) aTTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGCATGGCCATGGCCtg > 2:1668820/1‑150 (MQ=255) ttGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGCATGGCCATGGCCtgg > 2:1490744/1‑150 (MQ=255) aTCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGcat > 1:185625/1‑134 (MQ=255) aTCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGcat < 2:185625/134‑1 (MQ=255) aTCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGCatggccatggcc > 1:1594815/1‑144 (MQ=255) tCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGCATGGCCATGGCCTggtggt > 2:2209234/1‑150 (MQ=255) tCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGCATGGCCATGGCCTggtggt > 1:437554/1‑150 (MQ=255) gTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCt < 1:511837/78‑1 (MQ=255) aaggcgcCGAGCGCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTc > 1:433088/4‑121 (MQ=255) aaggcgcCGAGCGCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTc < 2:433088/118‑1 (MQ=255) aaggcgcCGAGCGCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGCATGGCCATGGCCTGGTGGTGCTCAg > 1:1885679/4‑150 (MQ=255) aaggcgcCGAGCGCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGCATGGCCATGGCCTGGTGGTGCTCAg > 1:1084736/4‑150 (MQ=255) tGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGCATGGACATGGCCTGGTGGTGCTcccag < 2:644419/150‑5 (MQ=255) gcgcCGAGCGCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCt > 1:99432/1‑120 (MQ=255) cgccgaGCGCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGCATGGCCATGGCCTGGTGGTGCTCAGGGtt < 2:1084736/150‑1 (MQ=255) gccgcGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGCATGGCCATGGCCTGGTGGTGCTCAGGGTTg > 2:1675523/1‑150 (MQ=255) gcgcTCGGCGCCTTGCTGACCACCACCATGGCGGGGAACAGCAGGCGGCCCTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGCATGGCCATGGCCTGGTGGTGCTCAGGGTTGAAc < 2:1771043/150‑1 (MQ=255) | CGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGGCCAACTGCGGTAATACTTGAAGGCTTGA‑CACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTTCAACACGCTGTTTGGCTCGACCTCGGCGTTTTCCTGCATGGCCATGGCCTGGTGGTGCTCAGGGTTGAAC > NC_002947/5377597‑5377894 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |