| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,389,315 | T→A | 6.3% | L926Q (CTG→CAG) | dld2 → | D‑lactate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,389,315 | 0 | T | A | 6.3% | 352.0 / 10.8 | 111 | L926Q (CTG→CAG) | dld2 | D‑lactate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (47/57); new base A (2/5); total (49/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.88e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
AGGCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCGGGTA > NC_002947/5389166‑5389464 | aGGCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCt < 2:1986476/150‑1 (MQ=255) gCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTgg > 2:1924771/1‑150 (MQ=255) ccaccCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGACGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGAcc > 2:1892816/1‑150 (MQ=255) caccCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACcg > 1:279853/1‑150 (MQ=255) caccCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCAGGTAGAcca < 2:789083/150‑2 (MQ=255) caccCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCAGGTAGAcca < 1:453180/150‑2 (MQ=255) caccCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCAACGACTACCACGGCCTGGTCTACCTGGTAGACcg > 1:960571/1‑150 (MQ=255) accCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTANCACGGCCTGGTCTACCTGGTAGACcgc < 1:2155607/150‑1 (MQ=255) accCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACcgc < 2:1825313/150‑1 (MQ=255) cccccGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACcgcg < 2:1100517/150‑1 (MQ=255) gCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCg > 2:1140392/1‑150 (MQ=255) cccACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCa < 2:2238186/150‑1 (MQ=255) ccACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAg > 2:963312/1‑150 (MQ=255) ccACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCAGGTAGAccag > 1:1189789/1‑131 (MQ=255) ccACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCAGGTAGAccag < 2:1189789/133‑3 (MQ=255) cACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGc < 2:1655463/150‑1 (MQ=255) cACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGc < 1:204884/150‑1 (MQ=255) aCTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGcc < 1:214830/150‑1 (MQ=255) cGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCctgc < 1:1892816/150‑3 (MQ=255) gTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACATGGTAGACCGCGTCACCCGGCCACGCAGCCTCTa > 2:1947119/1‑150 (MQ=255) ttGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTaa < 1:1051524/150‑1 (MQ=255) ttGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTaa < 1:1246128/150‑1 (MQ=255) gcAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGAAACAACAACATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAAcgcg > 2:593277/1‑150 (MQ=255) aGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGtt < 1:2081361/150‑1 (MQ=255) aGCCTGAAGGACGCCGTGCAGTAGTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGtt < 1:1179796/150‑1 (MQ=255) tGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACTCAGCCTCTAACGCGTTGat > 2:21830/1‑149 (MQ=255) tGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGata > 1:574702/1‑150 (MQ=255) tGAAGGACGCCGTGCAGTATTGCAGAGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGata > 1:677656/1‑150 (MQ=255) aGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAg < 2:279853/150‑1 (MQ=255) ggACGCCGTGCAGTATTGCAGCGAAGGTATGTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAgg > 1:2246696/1‑150 (MQ=255) gACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTgg > 1:878450/1‑103 (MQ=255) gACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTgg < 2:878450/103‑1 (MQ=255) ccGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTgggg > 1:144826/1‑150 (MQ=255) cGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCAACGACTACCACGGCCTTGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGa < 2:960571/150‑1 (MQ=255) tATTGCAGCGAAGGTATTTCCACCCGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGc < 1:835854/150‑1 (MQ=255) tGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCGTCGCCTTGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTa < 2:1399127/150‑1 (MQ=255) aGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGAcc < 1:1720394/91‑1 (MQ=255) aGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGAcc > 2:1720394/1‑91 (MQ=255) aGCGAAGGTATTTCCACCAGCCGCACCTCCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGa < 1:1772885/150‑1 (MQ=255) aaGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAg > 1:1159302/1‑126 (MQ=255) aaGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAg < 2:1159302/126‑1 (MQ=255) gTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGa < 1:989053/130‑1 (MQ=255) gTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGtt > 1:1448323/1‑150 (MQ=255) tttCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTAc > 2:1230687/1‑150 (MQ=255) caccaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAg < 2:154030/116‑1 (MQ=255) caccaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAg > 1:154030/1‑116 (MQ=255) accaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGa > 1:270102/1‑122 (MQ=255) accaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGa < 2:270102/122‑1 (MQ=255) accaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGt > 1:56336/1‑141 (MQ=255) accaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGt < 2:56336/141‑1 (MQ=255) caGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGaa < 2:574702/150‑1 (MQ=255) caGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGaa > 1:1191940/1‑150 (MQ=255) cccGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAaga < 2:793566/149‑1 (MQ=255) aCCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGc < 2:817075/79‑1 (MQ=255) aCCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCg < 1:963312/150‑1 (MQ=255) aCCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCg < 2:677656/150‑1 (MQ=255) cTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGAtata < 1:1487059/103‑1 (MQ=255) cTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGAtata > 2:1487059/1‑103 (MQ=255) tGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTc < 1:1748278/150‑1 (MQ=255) tAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTgg < 2:1941610/150‑1 (MQ=255) aGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGc > 2:34797/1‑150 (MQ=255) gAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGat < 1:1939325/82‑1 (MQ=255) gAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGat > 2:1939325/1‑82 (MQ=255) gAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCccca > 2:681730/1‑150 (MQ=255) gAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTCTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCccca < 1:1947119/150‑1 (MQ=255) cacaGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCcccaccca < 1:1608605/150‑1 (MQ=255) acaGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCcgc > 2:948432/1‑115 (MQ=255) acaGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCcgc < 1:948432/115‑1 (MQ=255) acaGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAaga < 1:1325112/120‑1 (MQ=255) acaGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAaga > 2:1325112/1‑120 (MQ=255) acaGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCccacccac > 2:247185/1‑150 (MQ=255) acaGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGATTAACCGCGCAGCCGCCAATACAGCGGGCCAATCCccgcccac > 2:2322153/1‑150 (MQ=255) acaGCGGCATCGACTACCACGGCCTAGTCTACCTGGTTATCTGCGTCACCCGGCCACGCAGCCTGTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGACGGTCCTGCTGGCCAATCCccacccac < 1:738427/150‑1 (MQ=38) aGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTg > 2:1884242/1‑150 (MQ=255) cGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTc < 2:144826/150‑1 (MQ=255) gCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCa < 1:681730/150‑1 (MQ=255) gACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCctct < 1:1070812/55‑1 (MQ=255) gACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCctct > 2:1070812/1‑55 (MQ=255) gACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCggg < 1:1095616/95‑1 (MQ=255) gACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCggg > 2:1095616/1‑95 (MQ=255) cTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGt < 2:2207878/140‑1 (MQ=255) cTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGt > 1:2207878/1‑140 (MQ=255) tACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGAACAACGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGcc < 1:1140392/150‑1 (MQ=255) aCCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGCGa > 1:1976662/1‑73 (MQ=255) ccACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCAc > 2:2297957/1‑141 (MQ=255) ccACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCAc < 1:2297957/141‑1 (MQ=255) ccACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGccac > 2:203500/1‑150 (MQ=255) cACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCa < 1:1299181/139‑1 (MQ=255) cACGACCTGGGCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCa > 2:1299181/1‑139 (MQ=255) gCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCg > 1:271862/1‑150 (MQ=255) gCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCg > 2:281428/1‑150 (MQ=255) gcggTCTACCAGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTgg > 1:2064058/3‑112 (MQ=255) gcggTCTACCAGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTgg < 2:2064058/110‑1 (MQ=255) aCCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCgg < 2:2073685/150‑1 (MQ=255) aCCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCgg < 1:247185/150‑1 (MQ=255) aCCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACACGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCgg < 1:1924771/150‑1 (MQ=255) ccTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCAc < 2:545863/126‑1 (MQ=255) ccTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCAc > 1:545863/1‑126 (MQ=255) tGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCGGGTa > 2:545622/1‑150 (MQ=255) tGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCGGGTa > 2:1579084/1‑150 (MQ=255) | AGGCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCGGGTA > NC_002947/5389166‑5389464 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |