| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,406,104 | C→G | 7.4% | A184A (GCG→GCC) | PP_4750 ← | amino acid ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,406,104 | 0 | C | G | 7.4% | 300.9 / 9.8 | 94 | A184A (GCG→GCC) | PP_4750 | amino acid ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (38/49); new base G (4/3); total (42/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
ACAAAGCCCTTCCACAACTCCGGCAACCATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGAATGGCGATA > NC_002947/5405959‑5406248 | acaAAGTCCTTCCACAACTCCGGCAACCATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCgg < 1:723972/150‑1 (MQ=255) caAAGCCCTTCCACAACTCCGGCAACCATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGgt > 2:840903/1‑150 (MQ=255) caAAGCCCTTCCACAACTCCGGCAACCATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGgt < 1:1411459/150‑1 (MQ=255) aaaGCCCTTCCACAACTCCGGCAACCATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCCCTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGgtg > 2:313884/1‑150 (MQ=255) aaaGCACTTCCACCACCCCGACAACCATTGCATCCACCTCGCCAGCCGTTCGCTCATCGGGCAATCCTTTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGCCCACTGGCACGCTGAACCCCAGGTACACCACCTCCGCCGCGatg < 2:151524/150‑1 (MQ=255) ccTTCCACAACTCCGGCAACCATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGAc < 2:314180/150‑1 (MQ=255) acaACTCCGGCAACCATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑Ag < 1:2086293/150‑1 (MQ=255) acaACTCCGGCAACCATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGGTTCAACGTGGCCGCCAGCCACCGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGGGTAGACGCTC‑Ag > 1:549071/1‑150 (MQ=255) cTCCGGCAACCATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGccc > 2:760891/1‑150 (MQ=255) cTCCGGCAACCATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGccc < 2:513842/150‑1 (MQ=255) cAACCATTGCATCCACATCGTCAGCAGTTCGCTCCTCGGGCAATCCTCTGTTTCCACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCATGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAg < 1:209980/150‑1 (MQ=255) cAACCATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAg < 2:1059685/150‑1 (MQ=255) aaCCATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAgg < 2:851104/150‑1 (MQ=255) aCCATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGt < 2:1499643/150‑1 (MQ=255) aCCATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGt < 1:840903/150‑1 (MQ=255) ccATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGtt < 1:2257604/150‑1 (MQ=255) cATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGttt < 1:1013488/150‑1 (MQ=255) ttGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACTCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGc > 1:2079538/1‑150 (MQ=255) ttGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTg > 2:1632450/1‑149 (MQ=255) ttGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTg < 1:1632450/149‑1 (MQ=255) ttGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGc < 1:1050193/150‑1 (MQ=255) tCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGATCGTCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTg < 1:150054/150‑1 (MQ=255) tCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTg < 2:585984/150‑1 (MQ=255) tCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTg < 2:1455778/150‑1 (MQ=255) gTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGt > 1:1418217/1‑150 (MQ=255) tCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACAACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTa > 1:1196690/1‑150 (MQ=255) agcagTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCGGCGGCGgtggt < 2:1060415/109‑3 (MQ=255) agcagTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCGGCGGCGgtggt > 1:1060415/1‑107 (MQ=255) gcagTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCcgcg < 1:991618/103‑1 (MQ=255) gcagTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCcgcg > 2:991618/1‑103 (MQ=255) cGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGaaa < 2:1320132/150‑1 (MQ=255) gCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAg > 1:2170304/1‑150 (MQ=255) cTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGc > 1:1416118/1‑150 (MQ=255) tCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCAccgccgccg > 2:390219/1‑89 (MQ=255) tCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCAccgccgccg < 1:390219/89‑1 (MQ=255) aaTCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCAcc > 1:708731/1‑150 (MQ=255) tCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGc > 2:786294/1‑93 (MQ=255) tCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGc < 1:786294/93‑1 (MQ=255) tctGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGc > 1:1003826/1‑150 (MQ=255) tttCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGAt < 1:478088/135‑1 (MQ=255) tttCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGAt > 2:478088/1‑135 (MQ=255) cGTGTCCGACAGCCAACGAGAGCACAAGCCTACTGGCACGCTGAGCACCAGGTACACCACCGCCGTCGCGGTGTAGCCGCTC‑AGGCCCTTAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGa < 2:1149135/150‑1 (MQ=255) cGTGGCCGACAGCCAACGACATAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGa < 1:126091/150‑1 (MQ=255) gACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGaaa > 1:1084391/1‑86 (MQ=255) gACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGaaa < 2:1084391/86‑1 (MQ=255) gACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACg < 1:1001783/150‑1 (MQ=255) gACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACg > 1:1126887/1‑150 (MQ=255) gACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACg > 1:1137353/1‑150 (MQ=255) ccAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTATACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGa > 2:2149567/1‑150 (MQ=255) gagagaACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCt < 2:708731/150‑1 (MQ=255) gagaACAAGGCCACTTTCACGCGGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGCCTGCCGAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTg < 1:760891/150‑1 (MQ=255) gagaACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGc > 2:368019/1‑121 (MQ=255) gagaACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGc < 1:368019/121‑1 (MQ=255) aCAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCa < 2:1003826/150‑1 (MQ=255) cAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTgg > 1:2076063/1‑88 (MQ=255) cAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTgg < 2:2076063/88‑1 (MQ=255) cAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTgg < 2:2075489/88‑1 (MQ=255) cAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTgg > 1:2075489/1‑88 (MQ=255) cAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGACGCCACACTATATCGTCTG‑ATGTCCTTAAAGGTTTGCTGGCAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAg < 1:543202/150‑1 (MQ=255) aaGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAgg > 2:973951/1‑150 (MQ=255) aaGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAgg < 2:1137353/150‑1 (MQ=255) aaGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAgg > 2:1724587/1‑150 (MQ=255) ggCCACTGGCACGCTGAGCACCGGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAAtcgt < 2:1114134/120‑1 (MQ=255) ggCCACTGGCACGCTGAGCACCGGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAAtcgt > 1:1114134/1‑120 (MQ=255) ggCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGcc > 2:589769/1‑150 (MQ=255) gCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCt > 2:1043492/1‑139 (MQ=255) gCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCt < 1:1043492/139‑1 (MQ=255) gCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCa > 1:1570392/1‑150 (MQ=255) ccTGGCACGATGAGCACCAGGTACACCGCTGCCGCCGCGGTGTAGACGGTC‑AGGCCCTGAAAGGTTTGCTGTGAACCCTGGTAACCCTGAAAGCGGATTTCACCAACGCCACTCGGCGAGGTCACGGCCTAGTCCTTGAGAAGGCCAATg < 2:549071/149‑1 (MQ=255) cTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGa > 2:259571/1‑130 (MQ=255) cTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGa < 1:259571/130‑1 (MQ=255) gCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGcc > 1:414402/1‑125 (MQ=255) gCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGcc < 2:414402/125‑1 (MQ=255) gCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGt > 1:2242035/1‑150 (MQ=255) gCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGt > 1:438965/1‑150 (MQ=255) tGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTgg > 2:19141/1‑150 (MQ=255) aGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCt < 1:589769/150‑1 (MQ=255) aGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCt < 2:1418217/150‑1 (MQ=255) aCCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAg < 2:1416118/150‑1 (MQ=255) cAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGt < 2:2242035/150‑1 (MQ=255) cAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCAACGGCCGAGTCTTTTAGCAGGCCAATGGCGTAGGTGGCTGAGGt > 2:2200461/1‑150 (MQ=255) aGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTg < 1:313884/150‑1 (MQ=255) ggTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCCACGCCAAGGTGCGAGTCGGCGTTCGAGTCCTTTAGCAGGCCAATGGCGTAGGTGGCTGAGGTgg < 1:658034/150‑1 (MQ=255) ggTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTgg < 1:2200461/150‑1 (MQ=255) acacCACCGCCGCCGCGGTGTAG‑CACTCTAGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGaa < 1:1209839/150‑1 (MQ=255) ctacaccGCGGCGGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGAAt > 1:1154947/4‑150 (MQ=255) tacaccGCGGCGGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCa > 2:1492131/3‑118 (MQ=255) tacaccGCGGCGGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCa < 1:1492131/116‑1 (MQ=255) tacaccGCGGCGGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAg > 2:1710944/3‑141 (MQ=255) tacaccGCGGCGGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAg < 1:1710944/139‑1 (MQ=255) ccaccGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGAATgg < 2:1894443/150‑1 (MQ=255) ccaccGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGAATgg > 1:1894443/1‑150 (MQ=255) caccGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAgg > 2:3819/1‑118 (MQ=255) caccGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAgg < 1:3819/118‑1 (MQ=255) accGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCtt > 2:1718161/1‑110 (MQ=255) accGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCtt < 1:1718161/110‑1 (MQ=255) accGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGAATGGCg > 2:291494/1‑150 (MQ=255) accGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGAATGGCg > 2:1152414/1‑150 (MQ=255) ccgccgccgCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGAATGGCGa < 1:1152414/150‑1 (MQ=255) gccgccgcGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGATGGGAATGGCGATa > 2:472310/1‑150 (MQ=255) | ACAAAGCCCTTCCACAACTCCGGCAACCATTGCATCCACATCGTCAGCAGTTCGCTCATCGGGCAATCCTCTGTTTCAACGTGGCCGACAGCCAACGAGAGAACAAGGCCACTGGCACGCTGAGCACCAGGTACACCACCGCCGCCGCGGTGTAGACGCTC‑AGGCCCTGAAAGGTTTGCTGTGAAACCTGGTAAGCCTGAAAGCTGATTTCACCAACGCCAATCGTCGAGGCCACGGCCGAGTCCTTGAGCAGGCCAATGGCGTAGGTGGCTGAGGTGGGAATGGCGATA > NC_002947/5405959‑5406248 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |