| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,427,625 | G→C | 7.3% | L176V (CTG→GTG) | rhlE‑I ← | ATP‑dependent RNA helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,427,625 | 0 | G | C | 7.3% | 349.7 / 14.3 | 110 | L176V (CTG→GTG) | rhlE‑I | ATP‑dependent RNA helicase |
| Reads supporting (aligned to +/- strand): ref base G (47/55); new base C (3/5); total (50/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.50e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
GCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAGGTCGAGCAAGCGGCCAGGGGTAGCCACCAGCAGGT > NC_002947/5427478‑5427774 | aCCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGcc < 1:1038181/150‑1 (MQ=255) aCCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGcc > 1:869430/1‑150 (MQ=255) gCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGt > 2:611609/1‑150 (MQ=255) gCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGt > 1:100388/1‑150 (MQ=255) ccACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTa > 2:551883/1‑150 (MQ=255) taaggCTGGACACTGCCGTCCGGGGCGTGGCGCGTGCTCTAGTCGCTATTGTGGGGGTCCTGCAGCGCCTGCCCCGTGCGCATTCGAATCCGATCTGGGAAGCCTGCGGAAAACAGCTGCGTCTGGCGCTTGCGCGGCACTGCcgcgcaa < 2:427756/146‑4 (MQ=255) cACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTACGCGGCACTGCcgcgcaa < 1:671565/150‑4 (MQ=255) cACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTACGCGGCACTGCcgcgcaa < 2:1813662/150‑4 (MQ=255) tGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACAcc < 2:857053/150‑1 (MQ=255) cTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCCTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGa > 2:1489308/1‑150 (MQ=255) ttGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGAc > 1:1447034/1‑150 (MQ=255) ttGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGAc > 2:149014/1‑150 (MQ=255) gCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAg < 2:525049/150‑1 (MQ=255) gCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAg < 2:116047/150‑1 (MQ=255) gCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAg < 1:1210957/150‑1 (MQ=255) gCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAg < 2:1897186/150‑1 (MQ=255) gCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAg < 2:2117913/150‑1 (MQ=255) tGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGCGGCGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGct > 2:885049/1‑150 (MQ=255) gcggcCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGCATCTGAGCTGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGctct < 1:1497770/150‑1 (MQ=255) gcggcCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGctct > 1:1747647/1‑150 (MQ=255) ccGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCgg < 1:130367/150‑1 (MQ=255) gTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTg > 2:597807/1‑137 (MQ=255) gTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTg < 1:597807/137‑1 (MQ=255) tGGCGTTGCGCGGGCTCACTTCGATAACAAGGGGGTCATTCAGGGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCaa > 2:885596/1‑150 (MQ=255) gcgcGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAg > 1:1338968/1‑150 (MQ=255) cgGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTc < 2:1883104/150‑1 (MQ=255) ggCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCaa < 2:1747647/150‑1 (MQ=255) ggCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCaa < 2:869430/150‑1 (MQ=255) ggCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCaa < 2:2055061/150‑1 (MQ=255) ctaaCTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGc < 1:1792264/147‑1 (MQ=255) cTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTGCACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGc < 1:408340/150‑1 (MQ=255) tCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGAc > 1:2039899/1‑119 (MQ=255) tCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGAc < 2:2039899/119‑1 (MQ=255) tCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTACGCGGCACTGCcgcgcaagc > 2:312082/1‑110 (MQ=255) tCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTACGCGGCACTGCcgcgcaagc < 1:312082/115‑6 (MQ=255) aCTTCGATACTGAGGGGGTCATTCAGCGCCACAAGCTTCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATg > 1:2372190/1‑150 (MQ=255) ttCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAg < 1:771723/144‑1 (MQ=255) ttCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAg > 2:771723/1‑144 (MQ=255) ttCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCg > 2:1610713/1‑150 (MQ=255) gATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTc > 1:2016886/1‑150 (MQ=255) aTACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCg > 2:2403494/1‑150 (MQ=255) aTACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCg > 1:1541978/1‑150 (MQ=255) tACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGc < 1:667444/116‑1 (MQ=255) tACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGc > 2:667444/1‑116 (MQ=255) tACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCgg < 1:1526669/150‑1 (MQ=255) tGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCtt > 1:742299/1‑150 (MQ=255) aGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCa > 1:2103785/1‑150 (MQ=255) gTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAACACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCaa < 1:1836046/150‑2 (MQ=255) cATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGCAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCa < 1:149014/150‑1 (MQ=255) aTTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCAc < 1:1610713/150‑1 (MQ=255) aTTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCAc > 1:153285/1‑150 (MQ=255) aTTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCAc < 2:380310/150‑1 (MQ=255) ttCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCAcc < 1:202085/150‑1 (MQ=255) ttCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCAcc > 2:1327695/1‑150 (MQ=255) tCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCa < 1:2403494/150‑1 (MQ=255) cgcCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCATGGt > 2:1376808/1‑150 (MQ=255) cgcCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGt < 1:695024/150‑1 (MQ=255) ccAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCt < 2:742299/150‑1 (MQ=255) ccGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCaa > 2:1940322/1‑111 (MQ=255) ccGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCaa < 1:1940322/111‑1 (MQ=255) cGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCg > 1:1440885/1‑94 (MQ=255) cGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCg < 2:1440885/94‑1 (MQ=255) ccAGCATGCGAATCTGATCGGAGACGGCATCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGt < 1:611609/150‑1 (MQ=255) ccAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGt > 1:1072696/1‑150 (MQ=255) ccAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGt < 2:2103785/150‑1 (MQ=255) ccAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGt < 1:1543009/150‑1 (MQ=255) cAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGCTTTCATCCAGCACCAGGGTCTGCACCTGGtt < 1:2244830/150‑1 (MQ=255) cATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGaa > 1:2324937/1‑150 (MQ=255) aTGCGAATCTGATCGGAGAAGGTGGCGGAAAACTGCAGCTTCGGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAAc < 2:2372190/150‑1 (MQ=255) gCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGa < 1:1165061/72‑1 (MQ=255) gCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGa > 2:1165061/1‑72 (MQ=255) gAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCa > 2:1644984/1‑150 (MQ=255) aaTCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTc < 2:212293/81‑1 (MQ=255) aaTCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTc > 1:212293/1‑81 (MQ=255) aTCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACg < 2:1072696/150‑1 (MQ=255) aTCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGtt < 1:1327695/150‑1 (MQ=255) gagaAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTc < 1:2191411/71‑1 (MQ=255) gagaAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTc > 2:2191411/1‑71 (MQ=255) gagaAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGc > 1:131390/1‑150 (MQ=255) ggTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGaa < 2:1541978/150‑1 (MQ=255) gCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAgg < 1:995932/150‑1 (MQ=255) gCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAgg > 1:379835/1‑150 (MQ=255) ggAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAGGTc > 1:2247326/1‑150 (MQ=255) agcagcGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAGGTCGAGCAAg < 1:1262898/150‑1 (MQ=255) tCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGTCGGAACAGGTCGAGCAAGCGGCCAg < 1:1644984/150‑1 (MQ=255) tGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAGGTCGAGCAAGCGGCCAggg < 2:131390/150‑1 (MQ=255) tGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAGGTCGAGCAAGCGGCCAggg < 2:100388/150‑1 (MQ=255) tGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTGCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAGGTCGAGCAAGCGGCCAggg < 1:2338241/150‑1 (MQ=255) tGGCGCCTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAGGTCGAGCAAGCGGCCAggg < 1:885049/150‑1 (MQ=255) gcgcTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAGGTCGAGCAAGCGGCCAGGGGt > 2:1924884/1‑150 (MQ=255) ggtgtacgcgGCACTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAGGTCGAGCAAGCGGCCAGGGGTa > 2:1316578/7‑150 (MQ=255) gcTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCg > 1:870554/1‑68 (MQ=255) gcTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCg < 2:870554/68‑1 (MQ=255) gcTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAGGTCGAGCAAGCGGCCAGGGGTAg > 2:911702/1‑150 (MQ=255) ttGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGt > 2:2029958/1‑112 (MQ=255) ttGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGt < 1:2029958/112‑1 (MQ=255) cgcgGCACTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAGGTCGAGCAAGCGGCCAGGGGTAGccacc > 2:669846/1‑150 (MQ=255) cgGCACTGCCGCGCACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAGGTCGAGCAAGCGGCCAGGGGTAGCCACaag < 2:940738/150‑1 (MQ=255) cAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAGGTCGAGCAAGCGGCCAGGGGTAGCCACcagcag < 2:1338968/150‑1 (MQ=255) gTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAGGTCGAGCAAGCGGCCAGGGGTAGCCACCAGCAGGt < 2:1619851/150‑1 (MQ=255) | GCACCAGCCACTGCTTGACGCTGGCGGCCGTGGCGTTGCGCGGGCTCACTTCGATACTGAGGGGGTCATTCAGCGCCAGCCCCGCCAGCATGCGAATCTGATCGGAGAAGGTGGCGGAAAACAGCAGCGTCTGGCGCTTGCGCGGCAGTGCCGCGTACACCGACTGCAGCTCTTCGGCAAAGCCCAGGTCAAGCATGCGGTCGGCTTCATCCAGCACCAGGGTCTGCACCTGGTTGAACTTCACGGCGTTCTGCCGGAACAGGTCGAGCAAGCGGCCAGGGGTAGCCACCAGCAGGT > NC_002947/5427478‑5427774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |