Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,440,411 T→C 5.9% T155A (ACC→GCC)  amn ← AMP nucleosidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,440,4110TC 5.9% 249.6 / 2.9 83T155A (ACC→GCC) amnAMP nucleosidase
Reads supporting (aligned to +/- strand):  ref base T (40/38);  new base C (3/2);  total (43/40)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01

CAGGATCCACGGCTGTACATGGCGCCAGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGCTCGCTGACGCCGACTTCTACCGTAACGGTGTAG  >  NC_002947/5440262‑5440556
                                                                                                                                                     |                                                                                                                                                 
cagGATCCACGGCTGTACATGGCGCCAGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACAGGAAGGTCATCTAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGt                                                                                                                                                   >  2:195558/1‑150 (MQ=255)
   gATCCACGGCTGTACATGGCGCCAGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGgc                                                                                                                                                >  1:775614/1‑150 (MQ=255)
    aTCCACGGCTGTACATGGCGCCAGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGgca                                                                                                                                               <  2:1612378/150‑2 (MQ=255)
       cACGGCTGTACATGGCGCCAGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGgccgcc                                                                                                                                            >  1:1359414/1‑150 (MQ=255)
        aCGGCTGTACATGGCGCCAGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGt                                                                                                                                                   >  1:317643/1‑142 (MQ=255)
        aCGGCTGTACATGGCGCCAGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGt                                                                                                                                                   <  2:317643/142‑1 (MQ=255)
        aCGGCTGTACATGGCGCCAGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGccgccg                                                                                                                                           >  1:1187568/1‑150 (MQ=255)
        aCGGCTGTACATGGCGCCAGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGccgccg                                                                                                                                           >  1:1710610/1‑150 (MQ=255)
          ggCTGTACATGGCGCCAGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGAc                                                                                                                                         >  2:7685/1‑150 (MQ=255)
              gTACATGGCGCCAGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGt                                                                                                                                     <  2:1674241/150‑1 (MQ=255)
                  aTGGCGCCAGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGt                                                                                                                                 >  1:159605/1‑150 (MQ=255)
                  aTGGCGCCAGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGt                                                                                                                                 >  1:2144073/1‑150 (MQ=255)
                       gctaGTCGCTGCTGGTGTGGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTgg                                                                                                                            <  2:1947746/147‑1 (MQ=255)
                       accAGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTgg                                                                                                                            >  2:1386330/2‑150 (MQ=255)
                          aGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGa                                                                                                                         >  2:639774/1‑150 (MQ=255)
                              gCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAacac                                                                                                                     >  1:1040147/1‑150 (MQ=255)
                              gCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAacac                                                                                                                     >  1:281555/1‑150 (MQ=255)
                               cTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGt                                                                                                                                     >  2:259244/1‑133 (MQ=255)
                               cTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGt                                                                                                                                     <  1:259244/133‑1 (MQ=255)
                                  ccGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTg                                                                                                                             >  2:2115357/1‑138 (MQ=255)
                                  ccGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTg                                                                                                                             <  1:2115357/138‑1 (MQ=255)
                                     gtgtAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGCTGTCGGCGGCCACCGACaacatc                                                                                                                                   <  2:311938/129‑6 (MQ=255)
                                     gtgtAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGCTGTCGGCGGCCACCGACaacatc                                                                                                                                   >  1:311938/1‑124 (MQ=255)
                                          gTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTg                                                                                                         >  1:2353897/1‑150 (MQ=255)
                                              aCCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCa                                                                                                     >  1:58227/1‑150 (MQ=255)
                                                cAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGc                                                                                                   >  2:496328/1‑150 (MQ=255)
                                                  ggcggcGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCgg                                                                                                 <  2:440249/150‑1 (MQ=255)
                                                       cgTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATg                                                                                            >  2:1260058/1‑150 (MQ=255)
                                                             gagaAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTa                                                                                      >  1:1974490/1‑150 (MQ=255)
                                                               gaAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTgg                                                                                                                            >  1:2226293/1‑110 (MQ=255)
                                                               gaAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTgg                                                                                                                            <  2:2226293/110‑1 (MQ=255)
                                                                aaGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCg                                                                                   >  1:602459/1‑150 (MQ=255)
                                                                  gTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTgggg                                                                                                                          >  2:500844/1‑109 (MQ=255)
                                                                  gTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTgggg                                                                                                                          <  1:500844/109‑1 (MQ=255)
                                                                  gTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGc                                                                                 >  2:2348627/1‑150 (MQ=255)
                                                                   tCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGcc                                                                                >  2:2338775/1‑150 (MQ=255)
                                                                     gACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATg                                                                                            <  1:1584411/136‑1 (MQ=255)
                                                                     gACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATg                                                                                            >  2:1584411/1‑136 (MQ=255)
                                                                      aCGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGc                                                                             >  2:2074568/1‑150 (MQ=255)
                                                                      aCGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGc                                                                             >  2:907684/1‑150 (MQ=255)
                                                                        gcgcgcgGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCtc                                                                           <  2:1187568/150‑1 (MQ=255)
                                                                         cgcgcgGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCtcg                                                                          <  1:1386330/150‑1 (MQ=255)
                                                                               gcatgcaacaacGCCGGTGGCATGATTTCGGCACGGTCCCAGTCGTACAGGCCGTCAGCGATGTTGGCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGccc                                                                    <  2:1093816/144‑1 (MQ=255)
                                                                                cATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCTTTTTTTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCt                                                                   <  1:1232551/150‑1 (MQ=255)
                                                                                cATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGGACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCTGCTCGTCGCCCt                                                                   >  2:756455/1‑150 (MQ=255)
                                                                                cATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCt                                                                   >  1:752644/1‑150 (MQ=255)
                                                                                        aacGCCAGCGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCATCTGCGCAGCGGTAATGCCGCTACCGGCCCGCTCGTCGCCCTGGTCGAcc                                                           <  1:195558/150‑1 (MQ=255)
                                                                                           gCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACcaca                                                        >  1:1818483/1‑150 (MQ=255)
                                                                                           gCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACcaca                                                        <  2:281555/150‑1 (MQ=255)
                                                                                                tGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAggg                                                   <  2:2144073/150‑1 (MQ=255)
                                                                                                 ggCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAgggg                                                  <  2:1818483/150‑1 (MQ=255)
                                                                                                  gCATGATTTCAGCACGGTCCCAGTCGTAAAGGCCACTAGCCATGTTGTTCCCGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGt                                                 >  1:2108431/1‑150 (MQ=255)
                                                                                                    aTGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTaa                                               <  1:7685/150‑1 (MQ=255)
                                                                                                    aTGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTaa                                               >  1:1797315/1‑150 (MQ=255)
                                                                                                    aTGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTaa                                               >  2:1266241/1‑150 (MQ=255)
                                                                                                    aTGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTaa                                               <  1:2074568/150‑1 (MQ=255)
                                                                                                     tGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAg                                              >  1:1971537/1‑150 (MQ=255)
                                                                                                     tGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAg                                              <  1:2348627/150‑1 (MQ=255)
                                                                                                      gATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAgg                                             <  1:1670797/150‑1 (MQ=255)
                                                                                                       aTTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAggg                                            <  2:1359414/150‑1 (MQ=255)
                                                                                                       aTTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAggg                                            >  1:2113560/1‑150 (MQ=255)
                                                                                                          tCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGata                                         >  2:1517845/1‑150 (MQ=255)
                                                                                                              cACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGACCAGGGCGAcgagctg                                                      <  1:2236474/133‑7 (MQ=255)
                                                                                                                 ggTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGCt                                  <  2:2108431/150‑1 (MQ=255)
                                                                                                                 ggTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGCt                                  <  2:2353897/150‑1 (MQ=255)
                                                                                                                     ccAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGACGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGCTCGCt                              >  1:42017/1‑150 (MQ=255)
                                                                                                                             aCAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGCTCGCTGACGCCGa                      <  2:1971537/150‑1 (MQ=255)
                                                                                                                             aCAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGCTCGCTGACGCCGa                      <  1:1266241/150‑1 (MQ=255)
                                                                                                                               aagCCATCAGCGATGATGTCGGTGGCCGCCGACAGGTCGGTACTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGCTCGCTGACGCCGACt                    >  2:1079543/3‑150 (MQ=255)
                                                                                                                               aGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGCTCGCTGACGCCGACt                    <  1:2102831/150‑1 (MQ=255)
                                                                                                                                   cATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGc                                   <  2:1822976/131‑1 (MQ=255)
                                                                                                                                   cATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGc                                   >  1:1822976/1‑131 (MQ=255)
                                                                                                                                     tCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGa                                                             <  2:771757/103‑1 (MQ=255)
                                                                                                                                     tCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGCTCGCTGACGCCGACTTCTAcc              <  1:895739/150‑1 (MQ=255)
                                                                                                                                     tCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCAGCTACCGGCCAGCTCGTCGCCCTGGTCGa                                                             >  1:771757/1‑103 (MQ=255)
                                                                                                                                       aGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGccc                                                                    >  2:934250/1‑94 (MQ=255)
                                                                                                                                       aGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGccc                                                                    <  1:934250/94‑1 (MQ=255)
                                                                                                                                        gCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGcc                                                                     <  2:1433263/92‑1 (MQ=255)
                                                                                                                                        gCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGcc                                                                     >  1:1433263/1‑92 (MQ=255)
                                                                                                                                             gttgtCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGCTCGCTGACGCCGACTTCTACCGTAACGgt      <  2:752644/150‑1 (MQ=255)
                                                                                                                                              ttgtCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGCTCGCTGACGCCGACTTCTACCGTAACGgtg     <  2:1797315/150‑1 (MQ=255)
                                                                                                                                               tgtCGGCGGCCACCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGAcc                                                           >  2:430932/1‑95 (MQ=255)
                                                                                                                                               tgtCGGCGGCCACCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGAcc                                                           <  1:430932/95‑1 (MQ=255)
                                                                                                                                                gtCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGCTCGCTGACGCCGACTTCTACCGTAACGGTGTa   <  1:496328/150‑1 (MQ=255)
                                                                                                                                                gtCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGCTCGCTGACGCCGACTTCTACCGTAACGGTGTa   <  1:1517845/150‑1 (MQ=255)
                                                                                                                                                 tCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGCTCGCTGACGCCGACTTCTACCGTAAAGgtgttg  <  2:602459/150‑3 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
CAGGATCCACGGCTGTACATGGCGCCAGTCGCTGCCGGTGTAGTGCACCAGGCGGCGTAGCGAGAAGTCGACGCGCGCGGCATCGAACAACGCCAGTGGCATGATTTCAGCACGGTCCCAGTCGTACAGGCCATCAGCGATGTTGTCGGTGGCCGCCGACAGGTCGGTGCTGGGGAACACCCGCGCCAGCTGCGCAGCGGTAATGCCGCTACCGGCCAGCTCGTCGCCCTGGTCGACCACATAGGGGTAAGGGATATTCTGCTCGCTGACGCCGACTTCTACCGTAACGGTGTAG  >  NC_002947/5440262‑5440556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑