| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,559,538 | C→T | 6.1% | W337* (TGG→TAG) ‡ | hisZ ← | ATP phosphoribosyltransferase regulatory subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,559,538 | 0 | C | T | 6.1% | 331.4 / 7.1 | 111 | W337* (TGG→TAG) ‡ | hisZ | ATP phosphoribosyltransferase regulatory subunit |
| Reads supporting (aligned to +/- strand): ref base C (52/52); new base T (3/4); total (55/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.83e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
CGTCTTGCTGAATCAATTGCCGATCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATATCGTCGTAGCGACCGCCCTGGGCGATCGATTGG > NC_002947/5559392‑5559681 | cGTCTTGCTGAATCAATTGCCGATCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGa < 1:1773742/150‑1 (MQ=255)cGTCTTGCTGAATCAATTGCCGATCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGa > 2:1294973/1‑150 (MQ=255) ttCTTGCTGAATCAATTGCCGATCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGAt < 2:2200643/149‑1 (MQ=255) gTCTTGCTGAATCAATTGCCGATCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGAt < 2:1640388/150‑1 (MQ=255) gTCTTGCTGAATCAATTGCCGATCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGAt < 1:1370919/150‑1 (MQ=255) tcgtGCGGAATCAATTGCCGATCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATg > 2:1844682/4‑150 (MQ=255) cTGAATCAATTGCCGATCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCTGGATgcc‑gga < 1:1454287/150‑3 (MQ=255) aaTCAATTGCCGATCACAATCCGCCTTAAGAGCAGCACTCAACGGCGGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCCCGTTGGCCAACTGGCAGCCTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGCTGCC‑TCCAgc > 2:904269/1‑149 (MQ=255) aaTCAATTGCCGATCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGt > 1:917941/1‑150 (MQ=255) aaTTGCCGATCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGc > 1:648639/1‑150 (MQ=255) aaTTGCCGATCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCAACTGAACAGCATCCAGATGCC‑GCCAGTTGGc > 1:32/1‑150 (MQ=255) aaTTGCCCATCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGc > 2:339963/1‑150 (MQ=255) tGCCGATCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAAt < 1:720147/150‑1 (MQ=255) gATCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTTCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGa > 2:18423/1‑150 (MQ=255) aTCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGAc > 2:2006615/1‑150 (MQ=255) caATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTG‑GCGGCATCTGGATgcc‑ggacag < 1:1759596/133‑6 (MQ=255) caATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTG‑GCGGCATCTGGATgcc‑ggacag > 2:1759596/1‑128 (MQ=255) aaTCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACATGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCg > 2:766615/1‑150 (MQ=255) agccGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGc < 1:1844682/148‑1 (MQ=255) aTCCGCCTCGAGAGCAGCACTCAACGGATGGTGGTGGTAGCG‑CTGAGCGAGACGTTGGCCCTCGTTGCGAAAAAGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGc < 1:540355/150‑1 (MQ=255) aTCCGCCTCGAGACAAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACGGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGc < 2:6707/150‑1 (MQ=255) cGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCCGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCg > 1:1188368/1‑150 (MQ=255) ccTAGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCAACGCCATTCTCCGGCATCCACATGCC‑GCCAGTTGGCAATACGACCttcgttcggc < 2:945107/150‑3 (MQ=255) agagCAGCACTCAATGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAgt < 1:1821900/150‑1 (MQ=255) gcagcaCTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGtgtg > 1:710736/1‑150 (MQ=255) cagcaCTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGGCTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACTGCCTCCGCTCGCCCCAGTGTGa < 2:648639/150‑1 (MQ=255) cTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAgg < 2:710736/150‑1 (MQ=255) cTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAgg > 1:1949630/1‑150 (MQ=255) tCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGAc < 2:1222263/124‑1 (MQ=255) tCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGAc > 1:1222263/1‑124 (MQ=255) cAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGt < 1:339963/150‑1 (MQ=255) ggCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTc > 2:1064303/1‑150 (MQ=255) ggCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTc < 2:2011346/150‑1 (MQ=255) cTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGCCCGGCATCCAGATGCC‑GCCCGTTGGCAATAAGACCTCCGCTCGGACCGGTGTGCCCAGGGTCCTcga < 2:1900825/150‑3 (MQ=255) aGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGt < 1:1895035/150‑1 (MQ=255) gCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTgg > 1:273012/1‑150 (MQ=255) gCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTgg > 1:778286/1‑150 (MQ=255) gCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCGCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTgg < 2:1006591/150‑1 (MQ=255) agagCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGgag > 2:2085848/1‑150 (MQ=255) gCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGaaa < 2:2031541/150‑1 (MQ=255) gCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGaaa < 2:2031858/150‑1 (MQ=255) ccTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAAc > 1:483021/1‑150 (MQ=255) ccTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAAc > 1:2197340/1‑150 (MQ=255) tGACCCGCACTCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACAACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCa < 2:917941/150‑1 (MQ=255) tGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGTCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCa > 1:673468/1‑150 (MQ=255) gAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATTCGTGGAGAAACCAg > 1:942882/1‑150 (MQ=255) aaCCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGt < 2:290046/150‑1 (MQ=255) acacGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGcc > 1:1462869/1‑150 (MQ=255) acacGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGcc > 2:1634846/1‑150 (MQ=255) gCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGgcgcgc > 1:1510549/1‑150 (MQ=255) cgtCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGGCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGccc > 2:604860/3‑150 (MQ=255) cTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCg > 1:109866/1‑150 (MQ=255) cGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGc < 2:1949630/150‑1 (MQ=255) ttGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGt > 2:2121709/1‑119 (MQ=255) ttGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGt < 1:2121709/119‑1 (MQ=255) ttGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCa > 1:1506184/1‑150 (MQ=255) ttGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGACCCAGTGTGACCAGGGTCTTCAAATGCGTGGAGAAACAAGTGGCGGGGCCCGCCCGGCCa > 2:229549/1‑150 (MQ=255) gcgcAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCact < 2:1462869/150‑3 (MQ=255) gcgcAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCaaa < 1:2409970/150‑1 (MQ=255) gcAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGt > 2:386584/1‑150 (MQ=255) cAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTgg < 1:1492822/66‑1 (MQ=255) cAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTgg > 2:1492822/1‑66 (MQ=255) ctcTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATAc < 1:2212093/69‑1 (MQ=255) aCTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCgg < 1:1228843/150‑1 (MQ=255) ggCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGgcgc < 2:483021/150‑1 (MQ=255) aGACTTGCTGCCAGAGGGTCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCGGGGCGCGCCCGGCCAAAGTCGGCGCCGa > 2:437625/1‑150 (MQ=255) aGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGa < 1:766615/150‑1 (MQ=255) acgtgctgtCAGAGTCCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGata < 2:32/147‑1 (MQ=255) cTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGa > 1:783958/1‑147 (MQ=255) cTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGa < 2:783958/147‑1 (MQ=255) ttGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATAtc < 1:1294973/150‑1 (MQ=255) ttGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATAtc > 1:1568279/1‑150 (MQ=255) ctgcCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAgg > 2:168754/1‑85 (MQ=255) ctgcCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAgg < 1:168754/85‑1 (MQ=255) tgcCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCa < 1:1848387/108‑1 (MQ=255) tgcCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCa > 2:1848387/1‑108 (MQ=255) tgcCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATAtcgtcg > 2:1781954/1‑150 (MQ=255) ccAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATATCGTCGTa > 2:1393356/1‑150 (MQ=255) ccAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATATCGTCGTa < 1:1781954/150‑1 (MQ=255) cAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTTGCAAGACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATATCGTCGTAg > 2:1069592/1‑150 (MQ=255) gggCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATATCGTCGTAGCGAc < 2:1400817/150‑1 (MQ=255) ccGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATATCGTCGTAGCGACCGc < 1:1278953/150‑1 (MQ=255) gCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTc > 2:101978/1‑78 (MQ=255) gCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTc < 1:101978/78‑1 (MQ=255) gCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCgg > 1:478001/1‑104 (MQ=255) gCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCgg < 2:478001/104‑1 (MQ=255) cATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGAc < 1:1543152/67‑1 (MQ=255) gcGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAAACCGGGGAAAACCCAATGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATATCGTCGTAGCGACCGCCCTgg < 1:904269/149‑1 (MQ=255) cGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATATCGTCGTAGCGACCGCCCTggg < 1:1393356/150‑1 (MQ=255) gCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGgcgc < 1:955689/122‑1 (MQ=255) gCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATATCGTCGTAGCGACCGCCCTGGGc < 1:1064303/150‑1 (MQ=255) cACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCCCTTCGCTCATTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATATCGTCGTAGCGACCGCCCTGGGcga < 2:1642593/150‑1 (MQ=255) tggcGGCATCTGGATGCCGGACAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATATCGTCGTAGCGACCGCCCTGGGcgatc < 1:601999/146‑1 (MQ=255) tggcGGCATCTGGATGCC‑GGCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGgc > 2:1443169/4‑95 (MQ=255) tggcGGCATCTGGATGCC‑GGCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGgc < 1:1443169/92‑1 (MQ=255) tCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTg > 2:1242913/1‑75 (MQ=255) tCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTg < 1:1242913/75‑1 (MQ=255) ccGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGGGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATATCGTCGTAGCGACCGCCCTGGGCGATCGAtt < 2:2346563/150‑1 (MQ=255) cGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATATCGTCGTAGCGACCGCCCTGGGCGATCGATTg > 2:1486577/1‑150 (MQ=255) ggCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATATCGTCGTAGCGACCGCCTTGGGCGATCGATTgg > 1:936646/1‑150 (MQ=255) | CGTCTTGCTGAATCAATTGCCGATCACAATCCGCCTCGAGAGCAGCACTCAACGGCTGG‑CCAGGCAGAGCCTGAACCACACGCTGGCCCTCGTTGCGCAACTGGCAGACTTGCTGCCAGAGGGCCGCATCGCCACTGTCCGGCATCCAGATGCC‑GCCAGTTGGCAATACGACCTCCGCTCGCCCCAGTGTGACCAGGGTCTTCAAATCCGTGGAGAAACCAGTGGCCGGGCGCGCCCGGCCAAAGTCGGCGCCGATATCGTCGTAGCGACCGCCCTGGGCGATCGATTGG > NC_002947/5559392‑5559681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |