| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,565,939 | A→T | 6.8% | I533N (ATT→AAT) | mutL ← | DNA mismatch repair protein MutL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,565,939 | 0 | A | T | 6.8% | 420.3 / 15.6 | 132 | I533N (ATT→AAT) | mutL | DNA mismatch repair protein MutL |
| Reads supporting (aligned to +/- strand): ref base A (63/59); new base T (6/3); total (70/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.30e-01 | |||||||||||
Only 100 of 134 total aligned reads displayed.
ACGGCACCGTGGCAAGCCATGGTGCCGAGCAGCTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCTGG > NC_002947/5565792‑5566086 | aCGGCACCGTGGCAAGCCATGGTGCCGAGCAGCTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATc < 2:1505474/150‑1 (MQ=255) cACCGTGGCAAGCCATGGTGCCGAGCAGCTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCa < 2:8932/150‑1 (MQ=255) ccGTGGCAAGCCATGGTGCCGAGCAGCTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAgg > 2:247432/1‑150 (MQ=255) aaGCCATGGTGCCGAGCAGCTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCgg < 1:1029622/150‑1 (MQ=255) aaGCCATGGTGCCGAGCAGCTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCgg > 1:1342471/1‑150 (MQ=255) gCCATGGTGCCGAGCAGCTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCgggg < 2:1419078/150‑1 (MQ=255) gCCATGGTGCCGAGCAGCTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCgggg > 1:565597/1‑150 (MQ=255) aTGGTGCCGAGCAGCTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGccc < 2:2339865/150‑1 (MQ=255) tGGTGCCGAGCAGCTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCa < 2:1252908/150‑1 (MQ=255) agcagcTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGc < 2:1650999/150‑1 (MQ=255) gcTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAAtt < 2:108290/150‑1 (MQ=255) cTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTc > 1:328053/1‑150 (MQ=255) tCATTGAGGTGCGCCTGAATTCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAg < 1:381534/137‑1 (MQ=255) tCATTGAGGTGCGCCTGAATTCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAg > 2:381534/1‑137 (MQ=255) aTTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGaa > 1:1271854/1‑150 (MQ=255) gcCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGgcgc > 1:291648/1‑150 (MQ=255) ccTGAATGCGATCACTGGTTTTTTACTCCATAATGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTCCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCt < 1:736720/150‑1 (MQ=255) ccTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCggg > 2:689022/1‑118 (MQ=255) ccTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCt > 2:982299/1‑150 (MQ=255) ccTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCt < 2:2092419/150‑1 (MQ=255) cTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTg > 2:1925744/1‑150 (MQ=255) cTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTg > 2:11578/1‑150 (MQ=255) tGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGa < 2:565597/150‑1 (MQ=255) tGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGa > 2:256413/1‑150 (MQ=255) aTGCGATCTCTGGTGTTGTACTCCAGAAGGTCTGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAAc < 2:1342471/150‑1 (MQ=255) tGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGaa < 1:1527240/96‑1 (MQ=255) tGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGaa > 2:1527240/1‑96 (MQ=255) gCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCa < 1:993663/150‑1 (MQ=255) gATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACt > 1:2395320/1‑150 (MQ=255) gATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACt < 2:1431529/150‑1 (MQ=255) tCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACtgt > 2:365594/1‑150 (MQ=255) tCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACtgt > 1:1312053/1‑150 (MQ=255) tGGTGCCGTCCTCAATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCAt > 2:2393972/1‑150 (MQ=255) tGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCAt < 1:1925744/150‑1 (MQ=255) tGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGCCCTCCGCATGCTTGAGCAAAGCGCGTGTCTGTCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCAt > 1:902292/1‑150 (MQ=255) ggTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATg < 2:291648/150‑1 (MQ=255) gTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGc > 2:1820491/1‑150 (MQ=255) tGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCgg > 2:644263/1‑99 (MQ=255) tGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCgg < 1:644263/99‑1 (MQ=255) cGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGctc > 1:1372431/1‑148 (MQ=255) gTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTc < 1:2393972/150‑1 (MQ=255) gTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTc > 2:131761/1‑150 (MQ=255) tACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCa < 1:407398/134‑1 (MQ=255) tACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCa > 2:407398/1‑134 (MQ=255) aCTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCgg > 2:1320417/1‑150 (MQ=255) aCTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCgg > 2:2236992/1‑150 (MQ=255) cATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCCGGGTCTCCCGGCCTAGACGCTGCAAGTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGcaca > 1:892498/1‑150 (MQ=255) cATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGaaa < 1:2218286/126‑1 (MQ=255) cATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAACCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGcaca > 1:738811/1‑150 (MQ=255) cATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTGGACTTCAGGCTGCATAAGCAAGGCCAAGCAGTGGCGACGCCTCAGGGTCTCGCGGCTCAGAGCCTGCAATTCAACGCGCAAGAGCCGGAATCACTGTGTGTGCCCTGCGGcgca > 2:331662/1‑150 (MQ=255) aTAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATATGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTCCGGCACAg > 1:507422/1‑150 (MQ=255) aaGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTc > 1:1176890/1‑150 (MQ=255) ggCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTc > 1:107229/1‑150 (MQ=255) gCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACgct > 2:2009308/1‑150 (MQ=255) gCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACgct > 1:2284741/1‑150 (MQ=255) gCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATGCGAAGCCCAGGCGCTCAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACgct > 1:1833029/1‑150 (MQ=255) cACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAg > 2:1590484/1‑102 (MQ=255) cACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAg < 1:1590484/102‑1 (MQ=255) aCGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACgctgg < 1:247432/150‑1 (MQ=255) gTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCt > 1:1038189/1‑104 (MQ=255) ccTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGa < 1:250646/150‑1 (MQ=255) ccTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATAAGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGa < 1:2343221/150‑1 (MQ=255) cTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGa < 1:749597/149‑1 (MQ=255) cTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAg > 1:985870/1‑150 (MQ=255) cTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAg < 2:2114919/150‑1 (MQ=255) tGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCCGTCGGTGCATTTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAgg > 1:899929/1‑150 (MQ=255) cACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGc < 1:256413/150‑1 (MQ=255) cAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGc > 2:1469367/1‑76 (MQ=255) cAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGc < 1:1469367/76‑1 (MQ=255) cAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGaaa < 2:1990076/99‑1 (MQ=255) cAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAg > 2:1609014/1‑150 (MQ=255) ggTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACt < 1:1503983/99‑1 (MQ=255) gTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGtctc > 1:786051/1‑150 (MQ=255) ttGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGc < 1:2246326/122‑1 (MQ=255) ttGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGc > 2:2246326/1‑122 (MQ=255) tGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCg < 1:131761/150‑1 (MQ=255) ctgcAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCa < 2:1723685/147‑1 (MQ=255) ttCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTGGAAGCACAGGACATAGTAGCAGGATGTATGCTTGTCGGTACAGTCGGCTTCACGCTGGCTGAGGGAGATGGTCTCCGGccc > 1:781811/1‑148 (MQ=255) ttCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCAc > 2:450530/1‑150 (MQ=255) gCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCg < 1:1979646/150‑1 (MQ=255) gCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCg > 1:1789310/1‑150 (MQ=255) cTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCgg > 2:1604100/1‑150 (MQ=255) gCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTcc < 1:318402/131‑1 (MQ=255) gCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTcc > 2:318402/1‑131 (MQ=255) ggCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCt > 1:1124386/1‑150 (MQ=255) ggCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCt < 1:11578/150‑1 (MQ=255) gCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTc < 1:982299/150‑1 (MQ=255) cGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGtctc > 1:427071/1‑123 (MQ=255) cGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGtctc < 2:427071/123‑1 (MQ=255) ccTGGCGATTCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAgg > 1:1925725/2‑113 (MQ=255) ccTGGCGATTCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAgg < 2:1925725/112‑1 (MQ=255) ccTGGCGATTCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCt > 2:316389/2‑150 (MQ=255) ccTGGCGATTCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCt > 2:977712/2‑150 (MQ=255) ccTGGCGATTCGCCAGGGTCTCGGGGCCCAGGAGCTGCAATTCGAAGCCCAGGCGCTGAAACGACTGTGCATGCTCTCCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGAGTCCCCCGCACCAGCAGCGGCTGGCCGCTCCGGcccg > 2:922299/2‑149 (MQ=255) cTGGCGATTCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGAGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTc > 1:1332026/1‑150 (MQ=255) tGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCAGGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCg < 2:1559014/150‑1 (MQ=255) gCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCt < 2:892498/150‑1 (MQ=255) gAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGa > 1:1583645/1‑99 (MQ=255) gAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCtgg > 1:160286/1‑150 (MQ=255) gAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATCAGCAACGGAAGAGCTGAAACGACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCtgg > 1:1855088/1‑150 (MQ=255) | ACGGCACCGTGGCAAGCCATGGTGCCGAGCAGCTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCTGG > NC_002947/5565792‑5566086 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |