| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,610,105 | C→G | 75.8% | G154A (GGC→GCC) | PP_4929 ← | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,610,105 | 0 | C | G | 75.8% | 217.1 / 84.5 | 120 | G154A (GGC→GCC) | PP_4929 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (16/13); new base G (46/45); total (62/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.57e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
CAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGATACGGCATGGCTTCGTC > NC_002947/5609957‑5610244 | cAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGcc > 2:1354623/1‑150 (MQ=255) aaCTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGgcc > 1:1789686/1‑150 (MQ=255) tGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGa > 1:1091323/1‑150 (MQ=255) ggTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCgg < 2:1736526/150‑1 (MQ=255) aaTTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACTCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTcc > 1:194870/1‑150 (MQ=255) aaTTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTcc > 2:1611701/1‑150 (MQ=255) aTTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTcca < 2:1497078/150‑1 (MQ=255) ttgttgGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTccac < 2:1789600/150‑1 (MQ=255) ttgttgGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTccac < 2:1789686/150‑1 (MQ=255) gggTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTgc > 1:1075147/1‑150 (MQ=255) gggTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTgc < 1:888559/150‑1 (MQ=255) cccGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCca < 2:1639410/150‑1 (MQ=255) ggCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTTACCATCTCCACGCTGCCTACCGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACAt > 1:53747/1‑150 (MQ=255) ggCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACAt > 1:2009210/1‑150 (MQ=255) cgccacccgccAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGc > 1:84629/6‑150 (MQ=255) ttCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGcc < 1:1611701/150‑1 (MQ=255) ttCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGCCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGcc > 2:614480/1‑150 (MQ=255) gcccgccAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTg < 2:1357425/150‑1 (MQ=255) gcccgccAGCGGGTGGCCGACCGCGCACACCGTGACCATACCCACGCTGCTCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTg < 1:1967756/150‑1 (MQ=255) cccgccAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTgg < 2:199250/150‑1 (MQ=255) ccgccAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTggg > 2:1991844/1‑150 (MQ=255) cAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTcc > 1:1526306/1‑150 (MQ=255) tGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGcc < 2:766400/150‑1 (MQ=255) ggCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCa < 2:1526306/150‑1 (MQ=255) gCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGTACGCCGCTGGCCAg > 1:1099364/1‑150 (MQ=255) cGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACCTCGCCCTGGGCTCCGCTGGCCAGtt > 1:354460/1‑150 (MQ=255) cGACAGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGtt > 2:92806/1‑150 (MQ=255) gACCGCGCAGACCGTGACCATTTCCACGCTGCCCAACCCACAGCGCTCTATGGAAGCCGGGATGATGTCGTGGAGGAAGAACAGGGCCGGATCGCCGCGCCGCTCCACCAGCTCGCGCGACATATCGCCCTGGGCTCCGCTGGCCAGTTg < 2:354460/150‑1 (MQ=255) aCCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGc < 1:1747391/150‑1 (MQ=255) ccGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCa < 2:77512/150‑1 (MQ=255) cacaCCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTcc < 2:53747/150‑1 (MQ=255) caaacCGTCACCCCCTCCTCGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGCTCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTcc < 2:1099364/147‑1 (MQ=255) acacCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCa > 2:1743182/1‑150 (MQ=255) cacCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAg < 1:92806/150‑1 (MQ=255) ccGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACGGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGa > 1:2353595/1‑150 (MQ=255) cGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGaa > 1:2033867/1‑150 (MQ=255) gACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACgg < 2:2067595/150‑1 (MQ=255) aCCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGCTCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACggg < 2:1666411/150‑1 (MQ=255) aCCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACggg < 2:1091323/150‑1 (MQ=255) ccATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGt > 1:1888123/1‑150 (MQ=255) cATCTCCACGCTGCCCACCGCACGGCGCTCCAAGGAAGCCGGGCTGCTTTCGTGGAGGAAGACCAGGGACAGATCGGGGCGCCGCTCCACCAGCTTGCAAGCCACATCGAACGCGGCTCCGCCGCCCAGTTGCACCCCCAGCTACgggga > 2:2156964/1‑148 (MQ=255) aTCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACGGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAg < 2:2353595/150‑1 (MQ=255) tcCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTcc > 1:1383154/1‑84 (MQ=255) ccACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGc > 1:1236460/1‑150 (MQ=255) ccACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGc < 1:1630548/150‑1 (MQ=255) cACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGTATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCt > 2:1347952/1‑150 (MQ=255) cACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGcgccgc < 2:1267883/79‑1 (MQ=255) cACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGcgccgc > 1:1267883/1‑79 (MQ=255) gCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTc > 2:1063770/1‑148 (MQ=255) gCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTc < 1:1063770/148‑1 (MQ=255) tgaccAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCa > 2:2400938/4‑150 (MQ=255) ccAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCTGTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGtt < 1:1249832/150‑1 (MQ=255) ccAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTg < 1:2206646/100‑1 (MQ=255) ccAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGtt > 2:2351281/1‑150 (MQ=255) aaCGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGc > 2:93525/1‑52 (MQ=255) aaCGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGcc > 2:1461692/1‑144 (MQ=255) aaCGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGcc < 1:1461692/144‑1 (MQ=255) aaCGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTtcg > 1:2216020/1‑150 (MQ=255) aaCGCACGGCGCTCCAAGGAAGCCGGGATAATTTCATAGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCCGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTtcg > 2:885137/1‑150 (MQ=255) aCGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCAc < 2:347023/114‑1 (MQ=255) aCGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCAc > 1:347023/1‑114 (MQ=255) aCGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAg < 1:1743182/150‑1 (MQ=255) aCGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAg > 1:1820076/1‑150 (MQ=255) aCGGCGCTCCAAGGAAGCCGGGATGCTTCCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAg > 1:2244876/1‑150 (MQ=255) ctgcgcTCCAAGGAAGCCGGGATGCTTGCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCAACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAgg < 2:431177/148‑1 (MQ=255) cGGCGCTCCAAGGAAGCCGGTATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAgg < 1:1347952/150‑1 (MQ=255) ggCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGc > 1:1816481/1‑150 (MQ=255) ggCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCa < 2:347278/105‑1 (MQ=255) ggCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCa > 1:347278/1‑105 (MQ=255) gcTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGt < 1:991979/150‑1 (MQ=255) gcTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGt < 1:254333/150‑1 (MQ=255) ccAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAg > 2:2072803/1‑122 (MQ=255) ccAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAg < 1:2072803/122‑1 (MQ=255) cAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGc < 2:1978454/122‑1 (MQ=255) cAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGAt > 2:732591/1‑150 (MQ=255) cAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCACCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGc > 1:1978454/1‑122 (MQ=255) cAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTc > 2:409291/1‑147 (MQ=255) cAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTc < 1:409291/147‑1 (MQ=255) cAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGAt > 2:2115900/1‑150 (MQ=255) gAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCAcc < 1:2153273/150‑1 (MQ=255) gggATGCTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGa < 2:2009210/150‑1 (MQ=255) cTTTCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGATaacca < 1:695453/150‑5 (MQ=255) tttCGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTTGATCACCGGCTGATACGGCa > 2:794250/1‑150 (MQ=255) tttCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACAt < 2:2387669/60‑1 (MQ=255) tttCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACAt > 1:2387669/1‑60 (MQ=255) tttCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGATACGGCa > 1:670922/1‑150 (MQ=255) cGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGATACGGCATgg < 2:1938973/150‑1 (MQ=255) cGTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCCCCAGTTCGTCGAGGCCGTCGATCACCGGCTGATACGGCATgg > 1:1630336/1‑150 (MQ=255) gTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTg < 2:382358/138‑1 (MQ=255) gTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTg > 1:382358/1‑138 (MQ=255) gTGGAGGAAGAACAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGa > 1:1975043/1‑139 (MQ=255) gaggaAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGATACGGCATGGCTTc < 1:2400938/150‑1 (MQ=255) gaagaaCAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGGGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGACTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGATACGGCATGGCTTCGTc > 1:2295816/1‑150 (MQ=255) gaagaaCAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGATACGGCATGGCTTCGTc < 1:2093256/150‑1 (MQ=255) gaagaaCAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGATACGGCATGGCTTCGTc > 2:1770631/1‑150 (MQ=255) gaagaaCAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGATACGGCAt < 2:1146259/141‑1 (MQ=255) gaagaaCAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGATACGGCAt > 1:1146259/1‑141 (MQ=255) agaaCAGGGCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGa > 2:2191380/1‑131 (MQ=255) cAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAgg > 2:863750/1‑109 (MQ=255) cAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAgg < 1:863750/109‑1 (MQ=255) | CAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGATACGGCATGGCTTCGTC > NC_002947/5609957‑5610244 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |