| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,658,167 | T→G | 5.4% | H57Q (CAT→CAG) | sahR → | methionine metabolism transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,658,167 | 0 | T | G | 5.4% | 322.1 / 8.1 | 110 | H57Q (CAT→CAG) | sahR | methionine metabolism transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (50/54); new base G (2/4); total (52/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.83e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
TCCCCGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCGAAGAAGTCGACGACCTGGCCCTACC > NC_002947/5658019‑5658316 | tCCCCGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATc > 1:1814549/1‑150 (MQ=255) cccGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCAc < 2:1045733/150‑1 (MQ=255) cccGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCAc > 1:110584/1‑150 (MQ=255) cccGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCAc > 1:1211690/1‑150 (MQ=255) ccGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCAcc < 1:1479321/150‑1 (MQ=255) ccGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCAcc < 2:2285001/150‑1 (MQ=255) cGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCt < 2:3992/150‑1 (MQ=255) gCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCaa < 2:2041619/150‑1 (MQ=255) cAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCttcac < 2:1300873/150‑5 (MQ=255) cAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCCCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCttgag < 2:681687/150‑5 (MQ=255) cAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTCGCGCAGTTCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAg < 1:2359481/150‑1 (MQ=255) cAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTACGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCAGCACCttgag < 2:412459/150‑5 (MQ=255) gcgAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTTCTCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGc > 2:2019179/1‑150 (MQ=255) cgAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCCCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCt < 1:739084/150‑1 (MQ=255) aaaCATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCCTGAGCCAGCACCTTGAGGTGATgg < 1:2125999/150‑1 (MQ=255) aaaTTCGCAGCCCTGTTCGAGGCCAGGGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCAAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCt > 2:1731511/3‑150 (MQ=255) ttGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCACGGTGCTGGCTCA‑g > 2:1344197/1‑150 (MQ=255) ttGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑g > 2:467487/1‑150 (MQ=255) tGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑gg < 1:1177082/150‑1 (MQ=255) ggtcgCCCGGTGTAAAGCCAGTTGCGAGGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGc < 2:1945027/146‑1 (MQ=255) gCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCCTGAGCCAGCACCTTGAGGTGATGGCTCA‑TGcc < 2:1748317/150‑1 (MQ=38) gCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGcc > 1:519784/1‑150 (MQ=255) aGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATc < 2:2052988/125‑1 (MQ=255) ccTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCt > 2:2223174/1‑150 (MQ=255) tgCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTg < 1:192995/150‑1 (MQ=255) tgCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTg < 2:1127212/150‑1 (MQ=255) tgCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTg < 1:465973/150‑1 (MQ=255) tgCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTg > 2:1556892/1‑150 (MQ=255) tgCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTg < 1:1546986/150‑1 (MQ=255) gCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTgg < 2:253770/150‑1 (MQ=255) cAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGc > 1:1678507/1‑150 (MQ=255) cAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGc > 2:60238/1‑150 (MQ=255) aaaGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGAGCTCGTGGCa > 1:1458041/1‑150 (MQ=255) aaaGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCa > 2:1007156/1‑150 (MQ=255) cAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACccg > 1:766145/1‑150 (MQ=255) gTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCCTCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAAgccgcc > 2:1495740/1‑150 (MQ=255) gCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGACACATACCCCCAAGGTGCTGGCTCG‑GGCGGGCCTCGTGGCAACCCGCcgcg > 2:1470993/1‑150 (MQ=255) gaggcgttgcgcCTCAACGTATTGTGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAAATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGaa < 1:1101581/147‑1 (MQ=255) cgctgcgcCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACATCGTGGCAACCCGCCGCGAAGGCa < 2:1066323/150‑1 (MQ=255) gcgcCTGAACGTATTGCGCGCCTTGACCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑c < 1:2208881/150‑1 (MQ=255) cgcCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGGGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑cc < 2:15114/150‑1 (MQ=255) cTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCAtc > 1:157645/1‑150 (MQ=255) aaCGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCAc < 2:1028787/90‑1 (MQ=255) aaCGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCAc > 1:1028787/1‑90 (MQ=255) tGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTAccgcc < 1:1556892/150‑1 (MQ=255) gcgcgcCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCAGCACCTTGAGGTGATGGCTCatg > 1:1462204/1‑99 (MQ=38) gcgcgcCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCAGCACCTTGAGGTGATGGCTCatg < 2:1462204/101‑3 (MQ=38) cgcgcCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGt < 1:60238/150‑1 (MQ=255) gcgcCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGtg > 1:53028/1‑150 (MQ=255) gcgcCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGtg > 1:29677/1‑150 (MQ=255) cTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGtgccct > 1:1054975/1‑150 (MQ=255) ttGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGtgccctg > 1:1734593/1‑150 (MQ=255) ggCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGtgccctgcc < 2:110584/150‑1 (MQ=255) gCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGtgccctg > 2:1679998/1‑147 (MQ=255) gCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGtgccctg < 1:1679998/147‑1 (MQ=255) cAATGACTCGTTCGGCGTGTTGGAACTGGCGCAGATCTTCGACATCAGCCAGTCGAGCATGAGCCATCACAGCCAGGCGCTGGCTCA‑GGCCAAGCTCGGGACAACAAGCCGCGAAGGCAATT‑GCAGCTTATACCGCAAGGCCCTGGCCGa > 2:813694/1‑150 (MQ=255) cAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGa < 2:1458041/150‑1 (MQ=255) cAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCATGCCCGa > 2:886968/1‑150 (MQ=255) aTGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATg < 1:576704/150‑1 (MQ=255) aCTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGcc > 2:1515452/1‑150 (MQ=255) tCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTg > 1:2033075/1‑150 (MQ=255) ttCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCAGCGTCTACCGCCGTGCCCTGCCCGCTGGCATgcgc > 2:396178/1‑150 (MQ=255) tGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTg < 2:1678507/150‑1 (MQ=255) cTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCaa > 2:2404672/1‑85 (MQ=255) tGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGcc > 1:1039279/1‑150 (MQ=255) ggAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCg > 2:2179961/1‑150 (MQ=255) gAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCgg < 1:7816/150‑1 (MQ=255) gcgcAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑gg < 2:738467/61‑1 (MQ=255) gcgcAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑gg > 1:738467/1‑61 (MQ=255) gcAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCAcgc > 1:1946363/1‑150 (MQ=255) aGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACgcgg > 2:2066143/1‑150 (MQ=255) ttCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCgctg > 1:2253548/1‑150 (MQ=255) tCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCgctgc > 2:1617581/1‑150 (MQ=255) tCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCgctgc < 2:53028/150‑1 (MQ=255) aTCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCgaa > 2:722368/1‑150 (MQ=255) aTCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCgaa < 1:2179961/150‑1 (MQ=255) gCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAATGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTggg < 2:2393275/118‑1 (MQ=255) gCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTggg > 1:2393275/1‑118 (MQ=255) gCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGt < 2:1785851/119‑1 (MQ=255) gCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGt > 1:1785851/1‑119 (MQ=255) gTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCt > 1:149897/1‑111 (MQ=255) gTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCt < 2:149897/111‑1 (MQ=255) gTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCGAAGAAGTcga < 2:1206576/150‑1 (MQ=255) gTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAA‑GCTGCGTGAATTGTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCGAAGAAGTcga < 1:2223174/150‑1 (MQ=255) gggCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCGAAGAAGTcgacga > 2:1551068/1‑150 (MQ=255) gggCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGGGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCGAAGAAGTcgacga < 2:1734593/150‑1 (MQ=255) gggCATGAGCCATCACCCCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCGAAGAAGTcgacga < 2:775404/150‑1 (MQ=255) ctGAGCCAGCACCTTGAGGTGATGGCTCATGCCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCGAAGAAGTCGACGACCt > 1:1186530/2‑150 (MQ=38) aTGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCt > 1:640907/1‑116 (MQ=255) aTGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCt < 2:640907/116‑1 (MQ=255) gAGCCATCCCCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAACGCAAAA‑CAATCTTTGAACGCCTTTCCCTGCCCGATGTCCTGCTCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCGAAGAAGTCGACGACCTGGc < 1:1495740/150‑1 (MQ=255) gAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGTGTCGCGGCTCGAAGAAGTCGACGACCTGGc < 1:1872441/150‑1 (MQ=255) gAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCGAAGAAGTCGACGACCTGGc < 1:1007156/150‑1 (MQ=255) gCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCGAAGAAGTCGACGACCTGGccc < 2:1946363/150‑1 (MQ=255) cATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCGAAGAAGTCGACGACCTGGCCCTa < 1:1344197/150‑1 (MQ=255) cATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCGAAGAAGTCGACGACCTGGCCCTa < 1:1515452/150‑1 (MQ=255) aTCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCgaa > 1:2079892/1‑128 (MQ=255) aTCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCGAAGAAGTCGACGACCTGGCCCTAc > 1:212552/1‑150 (MQ=255) aTCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCGGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCgaa < 2:2079892/128‑1 (MQ=255) tCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCGAAGAAGTCGACGACCTGGCCCTAcc > 2:20793/1‑150 (MQ=255) | TCCCCGAGCAACGCGAAACATTGGCAGCCCTGTGCAAAGCCAGTGGCGATGCGCTGCGCCTGAACGTATTGCGCGCCTTGGCCAATGACTCGTTCGGCGTGCTGGAACTGGCGCAGATCTTCGACATCGGCCAGTCGGGCATGAGCCATCACCTCAAGGTGCTGGCTCA‑GGCCGACCTCGTGGCAACCCGCCGCGAAGGCAACG‑CCATCTTCTACCGCCGTGCCCTGCCCGATGGCCTGCGCCTGGGTGGCCGGCTGCACGCGGCGCTGCTCGAAGAAGTCGACGACCTGGCCCTACC > NC_002947/5658019‑5658316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |