| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,658,774 | A→C | 5.5% | S260R (AGC→CGC) | sahR → | methionine metabolism transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,658,774 | 0 | A | C | 5.5% | 323.6 / 7.4 | 109 | S260R (AGC→CGC) | sahR | methionine metabolism transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (52/51); new base C (4/2); total (56/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.35e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
CTCGACAACGTGAACCTGCAGTTGGCCGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGCCGGGCTGGCCCATGCGGACAGCCTGTACGT > NC_002947/5658627‑5658916 | cTCGACAACGTGAACCTGCAGTTGGCCGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGc < 1:2226725/150‑1 (MQ=255) aCAACGTGAACCTGCAGTTGGCCGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCctgc < 2:315490/150‑1 (MQ=255) cAACGTGAACCTGCAGTTGGCCGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCctgct < 2:623733/150‑1 (MQ=255) aaCGTGAACCTGCAGTTGGCCGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCctgctg < 1:514004/150‑1 (MQ=255) aaCGTGAACCTGCAGTTGGCCGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCctgctg < 2:819117/150‑1 (MQ=255) gTGAACCTGCAGTTGGCCGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCa > 1:1091756/1‑139 (MQ=255) gTGAACCTGCAGTTGGCCGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCa < 2:1091756/139‑1 (MQ=255) gTGAACCTGCAGTTGGCCGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTc > 2:796345/1‑150 (MQ=255) aCCTGCAGTTGGCCGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCg > 1:2187691/1‑150 (MQ=255) ccTGCAGTTGGCCGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGAACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAACCTGCTGGTCACCGa > 1:6903/1‑150 (MQ=255) ttGGCCGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGc < 1:1967765/150‑1 (MQ=255) tGGCCGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCa < 2:240216/150‑1 (MQ=255) gCCGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGc > 1:1720646/1‑150 (MQ=255) cGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCa > 2:2296642/1‑150 (MQ=255) gaggCACTGGGTGCGACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACGCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCAt < 2:2065911/147‑1 (MQ=255) aCTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCctgctg > 1:814802/1‑124 (MQ=255) aCTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCctgctg < 2:814802/124‑1 (MQ=255) aCTGGGTGCAACGGATGTGGCCGACGAGTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGGCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGAGGCAGCGTGCTGGTCAGCGAACTGTGCAGCCATGACCa > 1:194193/1‑150 (MQ=255) tGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAgg > 1:53973/1‑150 (MQ=255) gggTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAggg > 1:2114646/1‑150 (MQ=255) ggTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAgggg > 1:1805867/1‑150 (MQ=255) ggTGCAACGGATGTGGCCGCCGACTCAGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAgggg < 1:1811457/150‑1 (MQ=255) tGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTg > 2:1503397/1‑150 (MQ=255) gCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTgg < 1:188124/150‑1 (MQ=255) aCGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCa < 2:405997/130‑1 (MQ=255) aCGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCa > 1:405997/1‑130 (MQ=255) gtgGCCGCCGACTGCGTTGTGCTGAACGTGGTGATTGACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGaa < 2:194193/150‑1 (MQ=255) gtgGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGaa < 1:1816500/150‑1 (MQ=255) gtgGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGaa > 1:312022/1‑150 (MQ=255) ggCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGc > 1:1019702/1‑150 (MQ=255) cgccgACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTg < 1:1185063/150‑1 (MQ=255) gACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTgcggc < 1:113767/150‑1 (MQ=255) gACTGCGTTGTGCTGAACATGGGGCTGGACCATGTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACTTAGCTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCATgcggt < 2:407216/150‑2 (MQ=255) ttGCGTTGTGCTGAACGTGATGCCGCACCCTGTCATCTACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGa < 2:1720646/149‑1 (MQ=255) tGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGAc > 1:116337/1‑150 (MQ=255) tGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGAc > 1:1026643/1‑150 (MQ=255) tGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCCGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGAc < 1:2380405/150‑1 (MQ=255) gTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACctc > 2:20146/1‑150 (MQ=255) gTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACctc > 1:868512/1‑150 (MQ=255) ttGTGCTGAACATGGTGCTGCACCATTTCAGCGAGACGGCCCTGGCCTTGCGCCAGCGGGCCAAACGGGTGAAGGCAGGGGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACctct > 2:1480903/1‑150 (MQ=255) ttGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACctct > 1:1760882/1‑150 (MQ=255) gtgCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTctgg < 2:1275671/150‑1 (MQ=255) cTGAACATGGTGCTGCACCATTTCAGTGACCCGGCCCTGGCCTTGCTCCAGCTGGCCAAACGTGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACAAGGGGTGGGCGCGCGAAGCCTGCGGCGCCCTctggctg < 2:1955365/150‑1 (MQ=255) cTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTctggctg < 2:35357/150‑1 (MQ=255) cTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTctggctg > 1:984558/1‑150 (MQ=255) cTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTctggctg < 1:20146/150‑1 (MQ=255) cTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTctggctg > 1:1323060/1‑150 (MQ=255) tGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTctggctgg < 1:399090/150‑1 (MQ=255) tGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTctggctgg < 1:897595/150‑1 (MQ=255) tGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTctggctgg < 1:2296642/150‑1 (MQ=255) aaCATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGc > 1:707302/1‑78 (MQ=255) aaCATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGc < 2:707302/78‑1 (MQ=255) aaCATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGc < 2:984558/150‑1 (MQ=255) aaCATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGc > 1:1555248/1‑150 (MQ=255) aaCATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAACCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGc > 2:1324051/1‑150 (MQ=255) gctgcACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACa < 1:1600367/150‑1 (MQ=255) ctgcACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAg < 2:721939/150‑1 (MQ=255) tgcACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAgg > 2:814133/1‑150 (MQ=255) tgcACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAgg > 2:1301172/1‑150 (MQ=255) gcACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGga > 2:936883/1‑150 (MQ=255) aCCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCct > 1:447949/1‑67 (MQ=255) aCCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCct < 2:447949/67‑1 (MQ=255) aCCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTTACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGgacg > 2:860565/1‑150 (MQ=255) ccATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGgacga > 1:372254/1‑150 (MQ=255) ccATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGgacga > 1:1816364/1‑150 (MQ=255) cATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGgacgac < 2:1816364/150‑1 (MQ=255) cATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGgacgac > 2:2237364/1‑150 (MQ=255) aTTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGAcc > 2:2401291/1‑150 (MQ=255) ttCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTg < 2:1323060/150‑1 (MQ=255) aGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGgcg < 1:2086333/150‑1 (MQ=255) gcgcCCCGGCCCTTGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGgcgc > 2:1901561/1‑150 (MQ=255) cGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTggg < 2:53973/150‑1 (MQ=255) cTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAAc < 2:2187691/150‑1 (MQ=255) cTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAAc < 1:796345/150‑1 (MQ=255) ccgcttggcCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGCGGGCGCGCGAAGCCTGCGGCGACCTCGGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCt > 1:2155337/8‑150 (MQ=255) cTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGga < 1:89952/123‑1 (MQ=255) cTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGga > 2:89952/1‑123 (MQ=255) cTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAAc < 1:500244/145‑1 (MQ=255) cTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAAc > 2:500244/1‑145 (MQ=255) cTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGc > 2:1685683/1‑150 (MQ=255) gcgcCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTCCTGTTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGCCgg < 1:1832548/150‑1 (MQ=255) gcCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGATCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGAcc > 2:414741/1‑123 (MQ=255) gcCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGAcc < 1:414741/123‑1 (MQ=255) aGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGCCGGGCTgt > 2:1093199/1‑149 (MQ=255) gCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGAGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGCCGGGCTGGc < 2:598173/150‑1 (MQ=255) tGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAg > 1:987403/1‑110 (MQ=255) cAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGGCGGGCTGGCCCATGc > 2:490739/1‑150 (MQ=255) cAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGCCGGGCTGGCCCATGc > 1:2189847/1‑150 (MQ=255) aaCGGGTGAAGGCAGGCGGCAGCCTGCTAGTCACCGAACAGGTTACCCTGTGCCGGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGCCGGGCTGGCCCATGCgg > 1:2108613/1‑150 (MQ=255) gAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGCCGGGCTGGCCCATGCGGACAGCCt < 2:1019702/150‑1 (MQ=255) gAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGCCGGGCTGGCCCATGCGGACAGCCt < 1:526651/150‑1 (MQ=255) cagcaggcTGCCGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGga < 1:71716/95‑1 (MQ=255) cagcaggcTGCCGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGga > 2:71716/3‑97 (MQ=255) cagcaggcTGCCGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGCCGGGCTGGCCCATGCGGACAGCCTGt > 2:376266/3‑150 (MQ=255) cagcaggcTGCCGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCCGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGCCGGGCTGGCCCATGCGGACAGcc > 2:628534/3‑147 (MQ=255) cagcaggcTGCCGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCCGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGCCGGGCTGGCCCATGCGGACAGcc < 1:628534/145‑1 (MQ=255) cagcaggcTGCCGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGGGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGCCGGGCTGGCCCATGCGGACAGCCTGt > 1:1535424/3‑150 (MQ=255) ggcaggcGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGCCGGGCTGGCCCATGCGGACAGCCTGTa > 2:1372709/1‑150 (MQ=255) aggcGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGCCGGGCTGGCCCATGCGGACAGCCTGTACGt < 2:868512/150‑1 (MQ=255) aggcGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCCGCCGGGCTGGCCCATGCGGACAGCCTGTACGt < 1:2401291/150‑1 (MQ=255) | CTCGACAACGTGAACCTGCAGTTGGCCGATGCACTGGGTGCAACGGATGTGGCCGCCGACTGCGTTGTGCTGAACATGGTGCTGCACCATTTCAGCGACCCGGCCCTGGCCTTGCGCCAGCTGGCCAAACGGGTGAAGGCAGGCGGCAGCCTGCTGGTCACCGAACTGTGCAGCCATGACCAGGGGTGGGCGCGCGAAGCCTGCGGCGACCTCTGGCTGGGCTTCGAACAGGACGACCTGGCGCGCTGGGCCAACGCTGCCGGGCTGGCCCATGCGGACAGCCTGTACGT > NC_002947/5658627‑5658916 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |