| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,734,152 | C→T | 7.2% | intergenic (‑122/+35) | proY ← / ← hutH | proline (histidine) APC transporter/histidine ammonia‑lyase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,734,152 | 0 | C | T | 7.2% | 429.0 / 16.0 | 148 | intergenic (‑122/+35) | proY/hutH | proline (histidine) APC transporter/histidine ammonia‑lyase |
| Reads supporting (aligned to +/- strand): ref base C (64/73); new base T (5/6); total (69/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.06e-01 | |||||||||||
Only 100 of 154 total aligned reads displayed.
CGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGC > NC_002947/5734003‑5734301 | ttGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccg < 2:2196296‑M2/150‑6 (MQ=255) gaCCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaa > 2:216844‑M2/1‑141 (MQ=255) ccTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaagg > 1:1116147‑M2/1‑139 (MQ=255) cTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGAAGCGGGAGCgcccgcgaagag < 2:1941117‑M2/150‑13 (MQ=255) ttGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGgc > 2:1696489/1‑150 (MQ=255) gCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGc < 2:366957/150‑1 (MQ=255) aTGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGccc < 1:2196296/150‑1 (MQ=255) gTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGGGTTGCCGCGAAGGGCCGCCCAGCGGCCCCa > 1:1210083/1‑150 (MQ=255) tCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAg > 1:1033625/1‑150 (MQ=255) gTCCTTTAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGTCCCCAGGGGc < 1:1299071/150‑1 (MQ=255) gTCATTGATTTGTTGTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACCCGGGGTTGTGTTTTGCACATACTTCTGTGGGAGCGGTCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGc < 1:1375546/150‑1 (MQ=255) tGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTAc > 1:2013335/1‑150 (MQ=255) gAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACa < 1:2054011/150‑1 (MQ=255) ttttGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTgg < 2:2364314/150‑1 (MQ=255) gTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTaca > 2:1098135/1‑150 (MQ=255) tCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTacac > 1:1199364/1‑150 (MQ=255) gggagaTTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACAccc < 2:1546797/148‑1 (MQ=255) gTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACAccc > 1:2126838/1‑150 (MQ=255) tGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCCCAGGGGGTGGTGTTTTGCACCCACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACccg > 1:139517/1‑150 (MQ=255) tGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGGGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACccg > 1:79457/1‑150 (MQ=255) tCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCATCCGGCTGCTTGCCAGCGGCCCCAGGGGCGTTACAGGCTTTGCAGTACACCCGCCGgca < 2:1191949/150‑1 (MQ=38) ggggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTg < 1:894775/128‑1 (MQ=255) ggggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTg > 2:894775/1‑128 (MQ=255) ggggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCaa > 1:1536041/1‑150 (MQ=255) ggggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCaa > 1:785611/1‑150 (MQ=255) ggggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCaa > 2:788571/1‑150 (MQ=255) ctgctgCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCg > 1:243915/1‑150 (MQ=255) tgctgcGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTg > 2:1145361/1‑123 (MQ=255) tgctgcGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACGCCCGCCGGCAGCAAGCCgg > 2:1590739/1‑150 (MQ=255) tgcGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCa < 2:2013335/150‑1 (MQ=255) gcAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGAc < 2:1033625/150‑1 (MQ=255) ccccTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTAcc > 1:1147375/1‑150 (MQ=255) cTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTAcc < 2:700090/147‑1 (MQ=255) cTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTAcc > 1:700090/1‑147 (MQ=255) ttCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTg < 2:1762241/150‑1 (MQ=255) ttCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTg > 1:904386/1‑150 (MQ=255) ttCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTg > 1:324243/1‑150 (MQ=255) cgGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCgg > 1:1991334/1‑132 (MQ=255) gggCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTg < 2:1298815/145‑1 (MQ=255) gCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCg < 1:1178504/128‑1 (MQ=255) aCGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTAccc < 2:228102/138‑1 (MQ=255) aCGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTAccc > 1:228102/1‑138 (MQ=255) cGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGt < 1:415438/150‑1 (MQ=255) ccGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGTgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgaca > 2:1974279‑M2/1‑51 (MQ=255) cGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaagggccgcccagcggccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaa < 1:1821205‑M2/150‑101 (MQ=255) gCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAgg > 2:1862527/1‑79 (MQ=255) gCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACg > 1:461431/1‑150 (MQ=255) tCCGACGGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGc < 2:1210083/150‑1 (MQ=255) tCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagt < 2:547905‑M2/150‑104 (MQ=255) tCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGc < 2:1199364/150‑1 (MQ=255) ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaa > 1:212187‑M2/1‑45 (MQ=255) ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaa < 2:212187‑M2/135‑91 (MQ=255) ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaag > 2:1080238‑M2/1‑45 (MQ=255) ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGc < 1:1706705/87‑1 (MQ=255) ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCaa > 2:1957658/1‑136 (MQ=255) ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCaa < 1:1957658/136‑1 (MQ=255) ccACAGGGGATGGTGTTTTGCACCATCCCCTGTGGGAGCGGGCGTgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgc < 2:1732371‑M2/150‑106 (MQ=255) cacaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGTgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagggcgggctaagtgcc < 1:500897‑M2/150‑107 (MQ=255) cacaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGTgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtct < 1:397577‑M2/131‑88 (MQ=255) cacaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGTgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtct > 2:397577‑M2/1‑44 (MQ=255) acaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCttt > 1:1771602/1‑150 (MQ=255) acaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCttt < 2:2306378/150‑1 (MQ=255) aGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTc < 2:147317/150‑1 (MQ=255) gggATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGTgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgcca < 2:300147‑M2/150‑112 (MQ=255) gggATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGa < 1:455188/150‑1 (MQ=255) ggATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACccgcc > 1:66904/1‑97 (MQ=255) ggATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACccgcc < 2:66904/97‑1 (MQ=255) gATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGata > 2:678581/1‑150 (MQ=255) tGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACg > 2:1574709/1‑136 (MQ=255) tGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACg < 1:1574709/136‑1 (MQ=255) ggTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCGTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATcc < 2:1771602/150‑1 (MQ=255) gtgtTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaagggccgcccagcggccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtct > 2:2394037‑M2/1‑33 (MQ=255) tgtTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCgg > 1:1679977/1‑150 (MQ=255) tgtTTTGCACCTACTCCTGTGGGAGCGGGCGTgcccgcgaaggggctgcgcagcagccccctgaatctcacga > 1:1956585‑M2/1‑32 (MQ=255) ttttGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGgcg < 1:1078424/150‑1 (MQ=255) tttGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaagggccgcccagcggccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtttc < 1:1907641‑M2/149‑121 (MQ=255) tttGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaagggccgcccagcggccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtttc > 2:1907641‑M2/1‑29 (MQ=255) ttGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaagggccgcccagcggccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtttcat > 2:730079‑M2/1‑28 (MQ=255) gCACCTACTTCTGTGGGAGCGGGCGTgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtttcatg > 1:300147‑M2/1‑26 (MQ=255) gCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTAGACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCgaa < 2:171791/150‑1 (MQ=255) cACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCgaag < 2:79457/150‑1 (MQ=255) cTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCtt > 1:1312030/1‑66 (MQ=255) aCTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacg < 2:2341978/150‑1 (MQ=255) aCTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacg < 1:1941117/150‑1 (MQ=255) ttCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggt < 1:1590739/150‑1 (MQ=255) gtgGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacg < 2:461431/150‑1 (MQ=255) tgGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacgg > 2:1940928/1‑150 (MQ=255) gggAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacggt < 1:1696489/150‑1 (MQ=255) cttcgCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTgg > 2:1336935/5‑99 (MQ=255) ttcgcggGCACgcccgctaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtttcatggccctcggctccgcc < 1:514485‑M2/147‑140 (MQ=255) ttcgCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTc > 2:2262008/4‑120 (MQ=255) ttcgCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTc < 1:2262008/117‑1 (MQ=255) ggAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGTCTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggt < 1:1106133/143‑1 (MQ=255) ggAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtttt > 1:196933/1‑119 (MQ=255) ggAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtttt < 2:196933/119‑1 (MQ=255) aGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGt < 2:1147375/150‑1 (MQ=255) cGGGCGCCCCAGCGAAGGGCCGCCCAGCGTCGCGAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCTGTCACACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAg < 2:139517/150‑1 (MQ=255) gcgcgcCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacg > 2:1693436/1‑134 (MQ=255) acgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgac < 1:1641767‑M2/68‑68 (MQ=255) cgcCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGc < 2:1633085/150‑1 (MQ=255) | CGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGC > NC_002947/5734003‑5734301 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |