BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	5,743,686	G→A	7.1%	Y745Y (TAC→TAT) ‡	glgP ←	glycogen phosphorylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,743,686	0	G	A	7.1%	368.5 / 12.9	126	Y745Y (TAC→TAT) ‡	glgP	glycogen phosphorylase
Reads supporting (aligned to +/- strand): ref base G (56/61); new base A (2/7); total (58/68)
Fisher's exact test for biased strand distribution p-value = 1.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.73e-01

Only 100 of 128 total aligned reads displayed.

GTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGAT  >  NC_002947/5743541‑5743835

gtgccgtgTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTAcc                                                                                                                                                   <  2:818693/150‑1 (MQ=255)

  gccgtgTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCgg                                                                                                                                                 <  1:2316139/150‑1 (MQ=255)

   ccgtgTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCggg                                                                                                                                                >  2:649587/1‑150 (MQ=255)

   ccgtgTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTACACCggg                                                                                                                                                <  1:1816776/150‑1 (MQ=255)

   ccgtgTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGCCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTAcc                                                                                                                                                   <  1:1036544/147‑1 (MQ=255)

   ccgtgTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGCCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTAcc                                                                                                                                                   >  2:1036544/1‑147 (MQ=255)

    cgtgTTCAATACCGCCTTTCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGa                                                                                                                                               >  2:1306354/1‑150 (MQ=255)

     ttgtTCAATACCACCTGGCGCCACCGCTCCTGCGGTGTGTGCCACAGATTCTCGACCCGCCGCTGAGCATCCCCGTAGTCATCGAACTCGGCACACACCAGGAAGTGATCATAGGGCACCACGCCGTCGATCAACCCGGTGTACCGGGaa                                                                                                                                              <  2:385890/149‑1 (MQ=255)

     gtgtTTAATACCGCCTTGCGCCACCACTCCTGCGTTGGGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGaa                                                                                                                                              <  2:792937/150‑1 (MQ=255)

     gtgtTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGaa                                                                                                                                              <  2:2407605/150‑1 (MQ=255)

     gtgtTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTACACCgggtt                                                                                                                                              <  2:2050202/150‑3 (MQ=255)

        ttCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTACACCgggttgat                                                                                                                                           <  2:816421/150‑6 (MQ=255)

          cAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGgtc                                                                                                                                         <  1:2384087/150‑1 (MQ=255)

           aaTACCGCCTTGCGCCACCGCTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGgtcg                                                                                                                                        >  2:917903/1‑150 (MQ=255)

           aaTACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGgtcg                                                                                                                                        >  2:1188995/1‑150 (MQ=255)

              aCCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCt                                                                                                                                     <  2:1555459/150‑1 (MQ=255)

                 gCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTATGGc                                                                                                                                  <  2:2173554/150‑1 (MQ=255)

                      gcgcCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGaa                                                                                                                             <  1:742849/150‑1 (MQ=255)

                       cgcCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAac                                                                                                                            <  1:649587/150‑1 (MQ=255)

                         ccaccaCTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCAGCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAacac                                                                                                                          >  2:1953851/1‑150 (MQ=255)

                          caccacTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATAGGCAACAACCAGTAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAacaca                                                                                                                         >  2:694732/1‑150 (MQ=255)

                           accacTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCTGGAAGGGTCGTCTGGCGAGAacacac                                                                                                                        <  1:1506988/150‑1 (MQ=255)

                             cacTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATTTCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACAcacca                                                                                                                      >  1:560932/1‑150 (MQ=255)

                              acTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTACACCgggttgatc                                                                                                                                          <  1:690651/129‑7 (MQ=255)

                              acTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTACACCgggttgatc                                                                                                                                          >  2:690651/1‑123 (MQ=255)

                                tCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTg                                                                                                                   >  1:936683/1‑150 (MQ=255)

                                       gtgtgtGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATgg                                                                                                            <  2:1509072/150‑1 (MQ=255)

                                       gtgtgtGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATAAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATgg                                                                                                            <  2:256446/150‑1 (MQ=255)

                                         gtgtgCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGcc                                                                                                          <  1:1188995/150‑1 (MQ=255)

                                          tgtgCCACAGATCCTCGCCCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCt                                                                                                         <  1:379977/150‑1 (MQ=255)

                                          tgtgCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCt                                                                                                         <  1:1306354/150‑1 (MQ=255)

                                              ccACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTACACCgggtt                                                                                                                                              <  1:1114058/109‑3 (MQ=255)

                                               cacaGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAacacac                                                                                                                        <  1:863830/130‑1 (MQ=255)

                                                 caGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAacac                                                                                                  >  1:1011406/1‑150 (MQ=255)

                                                  aGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAAcaca                                                                                                 <  2:842802/150‑1 (MQ=255)

                                                      tcTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAACCGTCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCgg                                                                                             <  1:1832466/149‑1 (MQ=255)

                                                      ccTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCgg                                                                                             <  2:1759817/150‑1 (MQ=255)

                                                       cTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGt                                                                                            >  2:2376278/1‑150 (MQ=255)

                                                        tCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTGTGGAGACAAGATATGATTGCGAATGGCCTGCAACACATAGGta                                                                                           >  2:1832466/1‑149 (MQ=255)

                                                        tCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTc                                                                                           >  1:1278713/1‑150 (MQ=255)

                                                        tCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTc                                                                                           >  2:384216/1‑150 (MQ=255)

                                                        tCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTc                                                                                           >  2:292188/1‑150 (MQ=255)

                                                        tCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTc                                                                                           >  2:1188872/1‑150 (MQ=255)

                                                        tCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTc                                                                                           >  1:1725365/1‑150 (MQ=255)

                                                             ccgccgCTGCGCATCCCCGTAGTCGTCGAAATCGGCACACACCCGGAAGGGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGTAGGGTAGTCTTGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCg                                                                                      >  1:557495/1‑150 (MQ=255)

                                                             ccgccgCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCTGCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCg                                                                                      >  1:1374632/1‑150 (MQ=255)

                                                             ccgccgCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCg                                                                                              <  2:533581/142‑1 (MQ=255)

                                                                ccgcTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGtt                                                                                   <  1:2376278/150‑1 (MQ=255)

                                                                        cATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCgg                                                                           <  2:936683/150‑1 (MQ=255)

                                                                            ccAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTAt                                                                       <  1:1188872/150‑1 (MQ=255)

                                                                            ccAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTAt                                                                       <  1:384216/150‑1 (MQ=255)

                                                                             cAGTAGTCAGCGACATCGGCACACACCACGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATg                                                                      <  2:560932/150‑1 (MQ=255)

                                                                              agtagtCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATgg                                                                     >  1:1127994/1‑150 (MQ=255)

                                                                                tagtCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGTGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGgca                                                                   <  1:292188/150‑1 (MQ=255)

                                                                                   tCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGgcagca                                                                >  1:1986411/1‑150 (MQ=255)

                                                                                    cATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGACGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAATCTTGCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCAt                                                               <  1:1398815/150‑1 (MQ=255)

                                                                                     aTCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCAtt                                                              >  1:505553/1‑150 (MQ=255)

                                                                                      tCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTg                                                             >  2:1856464/1‑150 (MQ=255)

                                                                                        gAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGgc                                                           <  2:330155/150‑1 (MQ=255)

                                                                                        gAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGgc                                                           <  2:156927/150‑1 (MQ=255)

                                                                                        gAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGgc                                                           <  1:917903/150‑1 (MQ=255)

                                                                                         aaaTCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGgcg                                                          >  1:314793/1‑150 (MQ=255)

                                                                                          aaccGGCACACTCCACGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCAGCAGTGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGTTATGGCAGCATTGgcgc                                                         <  2:1278713/147‑1 (MQ=255)

                                                                                           aTCGGCACACACCAGGAAGCGATCATAGGCCACCTGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGcc                                                        <  2:1207580/150‑1 (MQ=255)

                                                                                                cacacaCCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTATGGCGAGGACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGACGCGGCTGTGGCAGCATTGGCGCAAAGAt                                                   >  2:963662/1‑150 (MQ=255)

                                                                                                   acacCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCaa                                                                                         <  1:1552070/109‑1 (MQ=255)

                                                                                                   acacCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCAc                                                >  1:1566874/1‑150 (MQ=255)

                                                                                                       cAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGc                                            >  1:1504409/1‑150 (MQ=255)

                                                                                                       cAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGc                                            >  1:1703552/1‑150 (MQ=255)

                                                                                                          gAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACg                                         >  1:2262748/1‑150 (MQ=255)

                                                                                                          gAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACg                                         >  1:2263076/1‑150 (MQ=255)

                                                                                                            aGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACAcacca                                                                                                                      >  1:248877/1‑71 (MQ=255)

                                                                                                               gATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGtt                                                                                   >  1:1070313/1‑103 (MQ=255)

                                                                                                               gATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGtt                                                                                   <  2:1070313/103‑1 (MQ=255)

                                                                                                                    tAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCt                               >  1:1964716/1‑150 (MQ=255)

                                                                                                                     aGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCga                                                                                                                                >  1:419378/1‑52 (MQ=255)

                                                                                                                     aGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCga                                                                                                                                <  2:419378/52‑1 (MQ=255)

                                                                                                                     aGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCAc                                          >  2:1059673/1‑138 (MQ=255)

                                                                                                                     aGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCAc                                          <  1:1059673/138‑1 (MQ=255)

                                                                                                                       gCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCTCTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGgcagca                                                                <  1:566179/114‑1 (MQ=255)

                                                                                                                       gCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCa                            >  2:1321073/1‑150 (MQ=255)

                                                                                                                         caccaGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAAc                          <  2:2295063/150‑1 (MQ=255)

                                                                                                                         caccaGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAAc                          <  1:1569391/150‑1 (MQ=255)

                                                                                                                         caccaGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAAc                          <  2:107619/150‑1 (MQ=255)

                                                                                                                         caccaGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAAc                          <  2:1127994/150‑1 (MQ=255)

                                                                                                                         caccaGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAAc                          <  2:505553/150‑1 (MQ=255)

                                                                                                                                ccGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCtgctgc                   <  1:694732/150‑1 (MQ=255)

                                                                                                                                  gTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGgca                                                                   <  1:329221/100‑1 (MQ=255)

                                                                                                                                   tCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAg                >  1:1263046/1‑150 (MQ=255)

                                                                                                                                    cGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAgg               <  2:314793/150‑1 (MQ=255)

                                                                                                                                     gATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATGGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATGAACGGCACGCTTGCGCGCTTCAACCTGCTGCGAgat              >  1:1600277/1‑148 (MQ=255)

                                                                                                                                      aTCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGgca                                                                   <  2:1452600/96‑1 (MQ=255)

                                                                                                                                      aTCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGgca                                                                   >  1:1452600/1‑96 (MQ=255)

                                                                                                                                      aTCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTc             <  2:1725365/150‑1 (MQ=255)

                                                                                                                                        cAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAg           <  2:1263046/150‑1 (MQ=255)

                                                                                                                                         aaCCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAgg          <  2:1374632/150‑1 (MQ=255)

                                                                                                                                          aCCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCg                                              >  2:288062/1‑113 (MQ=255)

                                                                                                                                          aCCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGc         <  2:1566874/150‑1 (MQ=255)

                                                                                                                                                 gtACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGAt  <  2:1986411/150‑1 (MQ=255)

                                                                                                                                                 gtACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGCCGCGCTTTCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGAt  <  1:1856464/150‑1 (MQ=255)

GTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAACACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGAT  >  NC_002947/5743541‑5743835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`