Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,783,375 C→G 6.3% V598V (GTC→GTG kefA → intermediate mechanosensitive channel protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,783,3750CG 6.3% 357.3 / 11.8 111V598V (GTC→GTGkefAintermediate mechanosensitive channel protein
Reads supporting (aligned to +/- strand):  ref base C (52/51);  new base G (3/4);  total (56/55)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.04e-01

Only 100 of 111 total aligned reads displayed.

GCCTGGCGCTGTGCAGCTATGCCTTGCAGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGG  >  NC_002947/5783230‑5783523
                                                                                                                                                  |                                                                                                                                                    
gCCTGGCGCTGTGCAGCTATGCCTTGCAGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACt                                                                                                                                                  >  1:489735/1‑150 (MQ=255)
   tGGCGCTGTGCAGCTATGCCTTGCAGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTcc                                                                                                                                               >  1:2239973/1‑150 (MQ=255)
       gcTGTGCAGCTATGCCTTGCAGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTGGACTTCCGcca                                                                                                                                           <  2:1178253/150‑3 (MQ=255)
            gCAGCTATGCCTTGCAGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCTCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGGGGCGTGGCGGGAGTCCACTGCCGCTGGccca                                                                                                                                      >  1:1391017/1‑150 (MQ=255)
             cAGCTATGCCTTGCAGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACaa                                                                                                                                     >  2:1249382/1‑150 (MQ=255)
                     ccTTGCAGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCAc                                                                                                                                                   >  1:982950/1‑128 (MQ=255)
                     ccTTGCAGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTgg                                                                                                                                          <  2:864926/137‑1 (MQ=255)
                     ccTTGCAGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTgg                                                                                                                                          >  1:864926/1‑137 (MQ=255)
                      cTTGCAGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGt                                                                                                                            >  2:412398/1‑150 (MQ=255)
                       ttGCAGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTc                                                                                                                           <  2:727889/150‑1 (MQ=255)
                       ttGCAGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTc                                                                                                                           >  1:727889/1‑150 (MQ=255)
                       ttGCAGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTc                                                                                                                           >  2:1910036/1‑150 (MQ=255)
                           aGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGt                                                                                                                       <  1:1454137/150‑1 (MQ=255)
                           aGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGt                                                                                                                       >  1:659543/1‑150 (MQ=255)
                              tCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTcc                                                                                                                    <  1:547314/150‑1 (MQ=255)
                                  tGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAg                                                                                                                              <  1:364150/136‑1 (MQ=255)
                                  tGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAg                                                                                                                              >  2:364150/1‑136 (MQ=255)
                                     tCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATTCTCGCACCCGGAGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCgg                                                                                                             >  1:1747472/1‑150 (MQ=255)
                                         gggCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTgg                                                                                                         <  1:1249382/150‑1 (MQ=255)
                                            cAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTg                                                                                                                                           >  2:1875125/1‑113 (MQ=255)
                                            cAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTg                                                                                                                                           <  1:1875125/113‑1 (MQ=255)
                                             aaaaCGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTc                                                                                                     >  1:1803995/1‑150 (MQ=255)
                                             aaaaCGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTc                                                                                                     <  1:1828222/150‑1 (MQ=255)
                                             aaaaCGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTc                                                                                                     >  1:1803935/1‑150 (MQ=255)
                                             aaaaCGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTc                                                                                                     >  2:1494606/1‑150 (MQ=255)
                                             aaaaCGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTc                                                                                                     >  2:2155835/1‑150 (MQ=255)
                                             aaaaCGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTc                                                                                                     >  1:2068426/1‑150 (MQ=255)
                                             aaaaCGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTc                                                                                                     >  1:1508762/1‑150 (MQ=255)
                                             aaaaCGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTc                                                                                                     >  2:1059626/1‑150 (MQ=255)
                                               aaCGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTcgc                                                                                                   <  1:2155835/150‑1 (MQ=255)
                                                    cAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCt                                                                                              >  1:858777/1‑150 (MQ=255)
                                                        cTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGc                                                                                          >  2:921613/1‑150 (MQ=255)
                                                         tGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCa                                                                                         <  1:1059626/150‑1 (MQ=255)
                                                         tGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCa                                                                                         <  2:1508762/150‑1 (MQ=255)
                                                              gccgcACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACtgtg                                                                                    <  1:1318231/150‑1 (MQ=255)
                                                              gccgcACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACtgtg                                                                                    <  1:412398/150‑1 (MQ=255)
                                                               ccgcACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTgtgg                                                                                   <  2:1528389/150‑1 (MQ=255)
                                                                 gcACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTgtggtg                                                                                 <  2:1554968/150‑1 (MQ=255)
                                                                   aCTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCt                                                                               <  2:2058966/150‑1 (MQ=255)
                                                                    ctctGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTg                                                                              <  1:1672654/150‑1 (MQ=255)
                                                                          cAGCTGGCCCAGGCCCGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTCGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTg                                                                        <  1:2028161/150‑1 (MQ=255)
                                                                                gCCCAGGCCTGGCTGGTGTTCTACCCAGCCTCCAGTATCTTAATGGTGTAAGGCGTGCCCTGAAGCCACTGCCTCTGTCACAAATCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGAACTGTGGTGTTTTCACTGGTCTGc                                                                  <  2:1729960/150‑1 (MQ=255)
                                                                                gCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCCCCTGGGCACTTTGGTGCTGGCACTGGTCGGc                                                                  <  1:2233899/150‑1 (MQ=255)
                                                                                 cccAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCg                                                                 >  1:1729960/1‑150 (MQ=255)
                                                                                    aGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACtgtg                                                                                    <  1:1049392/128‑1 (MQ=255)
                                                                                    aGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACtgtg                                                                                    >  2:1049392/1‑128 (MQ=255)
                                                                                     ggCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCgtggt                                                             >  1:1817458/1‑150 (MQ=255)
                                                                                      gCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCgtggtg                                                            >  2:486410/1‑150 (MQ=255)
                                                                                        ctggctggTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTggtggc                                                          >  1:360710/1‑150 (MQ=255)
                                                                                        ctggctggTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTggtggc                                                          >  1:1843580/1‑150 (MQ=255)
                                                                                         tggctggTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCgtg                                                               >  1:2157546/1‑144 (MQ=255)
                                                                                          ggctggTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGTGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTggtggcgg                                                        <  1:520271/150‑1 (MQ=255)
                                                                                           gctggTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACt                                                                                                                                                  <  2:316225/59‑1 (MQ=255)
                                                                                           gctggTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACt                                                                                                                                                  >  1:316225/1‑59 (MQ=255)
                                                                                           gctggTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTggtggcggt                                                       <  1:2251188/150‑1 (MQ=255)
                                                                                             tggTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTggtggcggtgg                                                     <  1:795455/150‑1 (MQ=255)
                                                                                                 gtTCTCCACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGTACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGa                                                 <  2:1391017/150‑1 (MQ=255)
                                                                                                 gtTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGa                                                 <  1:1671882/150‑1 (MQ=255)
                                                                                                 gtTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGa                                                 <  1:570673/150‑1 (MQ=255)
                                                                                                  ttCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAg                                                >  2:105129/1‑150 (MQ=255)
                                                                                                    cTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCa                                              >  1:1674025/1‑150 (MQ=255)
                                                                                                     tACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAg                                                >  1:1672164/1‑147 (MQ=255)
                                                                                                     tACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAg                                                <  2:1672164/147‑1 (MQ=255)
                                                                                                      acacCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCg                                                                    <  1:1522198/126‑1 (MQ=255)
                                                                                                      acacCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCg                                                                    >  2:1522198/1‑126 (MQ=255)
                                                                                                       cacCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCa                                           <  2:296980/150‑1 (MQ=255)
                                                                                                          cGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTACACTTCCGCTGGCACAAACCGCAGGTCGAGGTCGGGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGcc                                        >  1:1976391/1‑150 (MQ=255)
                                                                                                             cTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTggtggcggtgg                                                     <  1:1660755/134‑1 (MQ=255)
                                                                                                             cTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTggtggcggtgg                                                     >  2:1660755/1‑134 (MQ=255)
                                                                                                             cTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTc                                     <  1:1910036/150‑1 (MQ=255)
                                                                                                             cTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTc                                     <  1:369432/150‑1 (MQ=255)
                                                                                                              tACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCg                                    <  2:2238150/150‑1 (MQ=255)
                                                                                                                ccGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGc                                  >  1:1651964/1‑150 (MQ=255)
                                                                                                                ccGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGc                                  >  1:2281102/1‑150 (MQ=255)
                                                                                                                  gTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCAc                                <  2:1786460/150‑1 (MQ=255)
                                                                                                                   tATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACaaa                                                                                                                                    >  1:619444/1‑49 (MQ=255)
                                                                                                                   tATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACaaa                                                                                                                                    <  2:619444/49‑1 (MQ=255)
                                                                                                                        tCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGa                                                 >  1:2205863/1‑127 (MQ=255)
                                                                                                                        tCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGa                                                 <  2:2205863/127‑1 (MQ=255)
                                                                                                                        tCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCg                                    >  1:2995/1‑140 (MQ=255)
                                                                                                                        tCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCg                                    <  2:2995/140‑1 (MQ=255)
                                                                                                                        tCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTTGCAg                          >  1:826094/1‑150 (MQ=255)
                                                                                                                        tCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAg                          >  2:1201541/1‑150 (MQ=255)
                                                                                                                        tCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAg                          >  2:2389227/1‑150 (MQ=255)
                                                                                                                         cGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAga                         <  1:387320/150‑1 (MQ=255)
                                                                                                                            aCCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAgacga                      >  2:466945/1‑150 (MQ=255)
                                                                                                                                    gcgtggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTgg              <  1:105129/150‑1 (MQ=255)
                                                                                                                                    gcgtggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCAGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTgg              <  2:1747472/150‑1 (MQ=255)
                                                                                                                                     cgtggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTggg             <  1:1201541/150‑1 (MQ=255)
                                                                                                                                      gtggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTgg                                                                       <  1:704677/91‑1 (MQ=255)
                                                                                                                                      gtggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTgg                                                                       >  2:704677/1‑91 (MQ=255)
                                                                                                                                       ccagcgGAAGTGGACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGt                                                                      >  1:38996/4‑92 (MQ=255)
                                                                                                                                       ccagcgGAAGTGGACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGt                                                                      <  2:38996/89‑1 (MQ=255)
                                                                                                                                       ccagcgGAAGTGGACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGa                                                 >  2:2315732/4‑113 (MQ=255)
                                                                                                                                       ccagcgGAAGTGGACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGa                                                 <  1:2315732/110‑1 (MQ=255)
                                                                                                                                        cagcgGAAGTGGACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCa           >  1:1696511/3‑150 (MQ=255)
                                                                                                                                           cgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCg        <  2:1817458/150‑1 (MQ=255)
                                                                                                                                            ggAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCgg       >  2:375032/1‑150 (MQ=255)
                                                                                                                                            ggAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCgg       >  2:1911535/1‑150 (MQ=255)
                                                                                                                                                 tCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCgtgg  >  1:460567/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
GCCTGGCGCTGTGCAGCTATGCCTTGCAGATCGATGCTCGCGGGCAAAACGCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGG  >  NC_002947/5783230‑5783523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: