| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,815,587 | C→T | 14.7% | intergenic (+15/+76) | PP_5090 → / ← PP_5091 | cell division protein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,815,587 | 0 | C | T | 14.7% | 251.2 / 33.9 | 109 | intergenic (+15/+76) | PP_5090/PP_5091 | cell division protein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (49/44); new base T (8/8); total (57/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.20e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
TCAAGGATGAAACCTGGTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCCCACC > NC_002947/5815439‑5815732 | aGGATGAAACCTGGTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCa > 2:103772/1‑150 (MQ=255) ggATGACACCGGGTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAg < 1:103772/150‑1 (MQ=255) gAAATCTGGTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGAt < 2:237223/150‑1 (MQ=255) cTGGTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGTCGCATCGCTGCggc > 1:1935467/1‑148 (MQ=255) tGGTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCTGGTGGCGGCAACCTGGTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACa > 1:293665/1‑150 (MQ=255) ggTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGTCGCATCGCTGCGGCaa < 2:1935467/150‑1 (MQ=255) ggTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGTCGCATCGCTGCGGCaa < 1:363188/150‑1 (MQ=255) gTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGTCGCATCGCTGCGGCAAg < 1:1464262/150‑1 (MQ=255) gTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACAAAGAAGGCCTTGTCGCATCGCTGCGGCAAg < 1:1917683/150‑1 (MQ=255) aCCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGAGTTCCTGAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGTCGCATCGCTGCGGCAAGGc < 1:1353279/150‑1 (MQ=255) cgTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGAGATGCGACAAGGCcttc < 2:1354294/150‑1 (MQ=255) gCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCttt < 2:2300698/150‑1 (MQ=255) cTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTta > 2:2023340/1‑150 (MQ=255) tgTTGGTCCGTTCAGCAACCCCGAGCAGTTGACAGGGGCACAGAAGCATCTGGCTGGGGCCGTTTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTtata < 1:33326/149‑1 (MQ=255) ggTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTtata < 1:309991/150‑1 (MQ=255) ttGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATg < 2:1027721/150‑1 (MQ=255) gggCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGa < 2:2029546/150‑1 (MQ=255) gTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCa < 2:685546/150‑1 (MQ=255) ttCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGTCGCATCGCTGCGGCAAg > 1:667820/1‑128 (MQ=255) ttCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCAt > 1:727807/1‑150 (MQ=255) ttCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCAt > 1:826168/1‑150 (MQ=255) gCAACCGCGAGCAGTTGACAGGGGGAGAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGcc > 1:2131768/1‑150 (MQ=255) gCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGcc > 2:1035012/1‑150 (MQ=255) ccGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTg > 2:162298/1‑150 (MQ=255) gcgAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGaa < 1:1035012/150‑1 (MQ=255) gcgAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGaa < 2:181580/150‑1 (MQ=255) cAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGc < 1:2023340/150‑1 (MQ=255) aGTTGACAGGGGCACAGAAGCAGCTGGTTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCt < 2:152814/150‑1 (MQ=255) aGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCt < 2:826168/150‑1 (MQ=255) aCAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCCACCTGTAAGGGTGACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTaaa < 2:674585/150‑1 (MQ=255) aCAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTaaa < 2:2140172/150‑1 (MQ=255) acaGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAagc < 2:1806458/144‑1 (MQ=255) acaGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAagc > 1:1806458/1‑144 (MQ=255) aaGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGTCGCATCGCTGCGGCAAg < 2:1318686/95‑1 (MQ=38) aaGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGTCGCATCGCTGCGGCAAg > 1:1318686/1‑95 (MQ=38) aaGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGc < 2:2403896/81‑1 (MQ=255) aaGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGc > 1:2403896/1‑81 (MQ=255) aaGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAgg < 2:1438476/129‑1 (MQ=255) gcagcTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCAcc > 1:1425098/1‑150 (MQ=255) agcTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATg < 1:723692/84‑1 (MQ=255) agcTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATg > 2:723692/1‑84 (MQ=255) agcTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCcttctt > 2:718336/1‑99 (MQ=255) agcTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCcttctt < 1:718336/99‑1 (MQ=255) agcTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGt < 2:727807/150‑1 (MQ=255) ctggctggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCa < 1:1846171/150‑1 (MQ=255) ctggctggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCa > 2:1940840/1‑150 (MQ=255) tggctggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGa < 1:737007/84‑1 (MQ=255) tggctggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGa > 2:737007/1‑84 (MQ=255) ggctggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAgc > 1:776221/1‑150 (MQ=255) gctggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAgcc > 1:1202156/1‑150 (MQ=255) tggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTatat < 1:441447/97‑1 (MQ=255) tggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTatat > 2:441447/1‑97 (MQ=255) gggCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGa < 2:666921/113‑1 (MQ=255) gggCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCATGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGa > 1:666921/1‑113 (MQ=255) ggCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCCCCACCGTCAgccccgcc > 1:1990208/1‑150 (MQ=255) gCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTAACAGGTCAGCATTGCCCGTGAAAGGGCTGTAAAGCAGCCCCGCCACCGTCAgccccgccc > 1:1835492/1‑150 (MQ=255) gggTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGCACAGCATTGCCCGTGAAAGGGCTGTAAAGAAGCCACGGCACCGTAAGCcacgccccgc > 2:1187111/1‑150 (MQ=255) cAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCcttct < 2:1740244/76‑1 (MQ=255) cAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCcatcg > 1:1740244/1‑75 (MQ=255) cAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCCCCGTCAGCCCCGCCCCGCATTCCttt < 1:1633311/150‑1 (MQ=255) cAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCCGTACAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCaccccccc > 2:789979/1‑143 (MQ=255) ccTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGt < 1:2151672/95‑1 (MQ=255) gTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGaca < 2:2028683/150‑1 (MQ=255) ctgcAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGc < 2:227669/61‑1 (MQ=255) ctgcAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTg > 2:1550198/1‑150 (MQ=255) tgcAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCcttc > 1:1838446/1‑64 (MQ=255) tgcAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCcttc > 1:1838464/1‑64 (MQ=255) tgcAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCcttc < 2:1838464/64‑1 (MQ=255) tgcAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCcttc < 2:1838446/64‑1 (MQ=255) tgcAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTgg > 1:87988/1‑150 (MQ=255) aaCAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTg > 2:2024642/1‑150 (MQ=255) aaCAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTCATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATACCTTTCGGACACCTGGCTg > 2:808894/1‑150 (MQ=255) aCAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTc < 1:1448694/136‑1 (MQ=255) aCAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTc > 2:1448694/1‑136 (MQ=255) aGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGcc > 2:546357/1‑78 (MQ=255) aGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGcc < 1:546357/78‑1 (MQ=255) aGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGcc < 1:364076/101‑1 (MQ=255) aGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGcc > 2:364076/1‑101 (MQ=255) ggCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAAc < 1:1940840/150‑1 (MQ=255) gCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACg < 1:789979/150‑1 (MQ=255) gACCCGTCAGTAAAGACGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCNTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTcc < 1:1187111/150‑1 (MQ=255) ccGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTc > 1:1043250/1‑124 (MQ=255) ccGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTc < 2:1043250/124‑1 (MQ=255) aCGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACa < 1:2024642/150‑1 (MQ=255) cGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAg > 1:1707558/1‑150 (MQ=255) cGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACAGTCAGACCCGCCCGGCAGTTCTTTCTGACACCTGGCTGTTCAACGTCCAGAAGTCATACAg > 1:2342716/1‑150 (MQ=255) gaagaaGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACAACTGGCTGTTAAACGTCCAGAAGTCATACAga > 2:1031661/1‑149 (MQ=255) agaagGCCTTGTCGCATCGCTGCGGCAAGGCCTTCTTTATATGGACACCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCAc > 2:2142936/1‑150 (MQ=39) agGCCTTGCCGCAGCGATGCGACAAGGCCTTCATAATAAGGCCCGCCTTACCAGCTACGAGGAAACAGAGCAGCGCCTCGACCGTCTGCCCCTCCCCGCATGCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCAcccc > 2:2080362/1‑150 (MQ=255) ccTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCccac < 2:293665/150‑1 (MQ=255) cTTGTCGCATCGCTGCGGCAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCccacc > 1:2219284/1‑150 (MQ=255) cTTGTCGCATCGCTGCGGCAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCccacc > 2:30554/1‑150 (MQ=255) cTTGTCGCATCGCTGCGGCAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCccacc > 1:1206773/1‑150 (MQ=255) cTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTc > 2:1974760/1‑99 (MQ=255) cTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTc < 1:1974760/99‑1 (MQ=255) cTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGtt < 1:1156558/119‑1 (MQ=255) cTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGtt > 2:1156558/1‑119 (MQ=255) cTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCccacc > 1:2378879/1‑150 (MQ=255) cTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCccacc > 2:719438/1‑150 (MQ=255) cTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCccacc > 2:1165076/1‑150 (MQ=255) | TCAAGGATGAAACCTGGTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGCCGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCCCACC > NC_002947/5815439‑5815732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |