| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,816,587 | C→G | 8.2% | A114G (GCC→GGC) | PP_5092 → | NLP/P60 protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,816,587 | 0 | C | G | 8.2% | 347.2 / 16.9 | 110 | A114G (GCC→GGC) | PP_5092 | NLP/P60 protein |
| Reads supporting (aligned to +/- strand): ref base C (48/53); new base G (6/3); total (54/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
AATGTCGCCGCCATGTCGCCTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGTAGCCATCTACCTGGGTAACGAC > NC_002947/5816439‑5816735 | gTCGCCGCCATGTCGCCTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGAc < 2:1362146/150‑1 (MQ=255) ccgccATGTCGCCTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCg > 1:1127752/1‑150 (MQ=255) cgccATGTCGCCTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGa > 2:21982/1‑150 (MQ=255) gccATGTCGCCTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGTTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGGCGCCGACGTCGAc < 2:1837813/150‑1 (MQ=255) cATGTCGCCTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGGCGACGTCgttga > 2:2230380/1‑146 (MQ=255) aTGTCGCCTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGGCGACGTCgttgaa < 1:2230380/150‑6 (MQ=255) gCCTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCcgcg > 2:1149360/1‑150 (MQ=255) ccTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGGCGACGTCgt > 2:208719/1‑139 (MQ=255) ccTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGGCGACGTCgt < 1:208719/140‑2 (MQ=255) ccTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCgcgc > 2:1509814/1‑150 (MQ=255) ccTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCgcgc > 2:184007/1‑150 (MQ=255) caaagcgGCGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTCTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATAGGCCTTCAACGACGTGGCCGACGTCGACCTGCCGCGCACCTcc > 1:1221744/1‑150 (MQ=255) caaagcaGCGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTcc > 1:992526/1‑150 (MQ=255) aagcaGCGATGGGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGAAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCaa < 2:454941/150‑1 (MQ=255) gcagcGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGcc < 1:1974385/136‑1 (MQ=255) gcagcGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGcc > 2:1974385/1‑136 (MQ=255) cGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCAt > 1:944355/1‑150 (MQ=255) gATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATg < 1:21982/150‑1 (MQ=255) gATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATg < 1:132500/150‑1 (MQ=255) tGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCggg < 2:2147633/150‑1 (MQ=255) gTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACg > 2:1465633/1‑150 (MQ=255) tGCGTTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGGCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACgg < 2:1751507/150‑1 (MQ=255) aaaTGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCTGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGaa < 2:944355/150‑1 (MQ=255) tgCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCTCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTgg < 2:1746005/150‑1 (MQ=255) tgCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTgg < 1:1149360/150‑1 (MQ=255) gTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCATGGGGTGAAGGTGGCCAAgg < 2:2020430/150‑1 (MQ=255) gTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAgg < 1:1465633/150‑1 (MQ=255) tCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGa > 1:1922181/1‑150 (MQ=255) ccTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGAt > 1:1569847/1‑150 (MQ=255) ccTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGAt < 1:746598/150‑1 (MQ=255) ccTTATGTTTGGGGCGGCAGCAGCACCACACAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGAt < 2:2110120/150‑1 (MQ=255) ccTTATGTTTGGGGCGCCAGCAGCACCCCACAAGGATTTGATTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGAt < 2:1599907/150‑1 (MQ=255) cTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATg < 2:782243/113‑1 (MQ=255) cTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATg > 1:782243/1‑113 (MQ=255) cTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATc < 1:184007/150‑1 (MQ=255) ttATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCt > 2:147745/1‑150 (MQ=255) tttGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGc > 2:1827531/1‑150 (MQ=255) tGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCt < 1:133678/150‑1 (MQ=255) gggCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTgg > 2:552715/1‑150 (MQ=255) ggcggcAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGc < 1:1509814/150‑1 (MQ=255) gcagcaGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGAcc < 1:1225948/150‑1 (MQ=255) agcCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGaa < 1:2117031/134‑1 (MQ=255) agcCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGAtc < 2:2091310/150‑1 (MQ=255) cccGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCgg > 1:2341398/1‑97 (MQ=255) cccGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCgg < 2:2341398/97‑1 (MQ=255) cccGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGGCCTGAtctt > 2:1933431/1‑150 (MQ=255) ccGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGAtcttc > 2:369093/1‑150 (MQ=255) gAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATcttctt > 2:1259133/1‑150 (MQ=255) gAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATcttctt < 1:369093/150‑1 (MQ=255) gAAAAAAGGCTTTGACTGCAGCGGGCTGGTAAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATcttctt < 1:1236339/150‑1 (MQ=255) aaaaaGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGAtc < 2:1158222/143‑1 (MQ=255) aaaaaGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGAtc > 1:1158222/1‑143 (MQ=255) aaaGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAAc < 2:1015937/150‑1 (MQ=255) aaGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACa < 1:552715/150‑1 (MQ=255) ggCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATc < 1:1827531/150‑1 (MQ=255) tttGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGAt > 2:1163863/1‑114 (MQ=255) tttGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGAt < 1:1163863/114‑1 (MQ=255) ttGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAaga < 1:147745/150‑1 (MQ=255) aCTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGcc > 1:794179/1‑150 (MQ=255) tGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTgg < 2:2129320/97‑1 (MQ=255) tGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTgg > 1:2129320/1‑97 (MQ=255) cGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGt < 1:1661416/150‑1 (MQ=255) gggCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCGGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAAACAGGCTATGTTGTCGTCTTCAACATCAAGAGCCGTCGGGTc > 2:194097/1‑150 (MQ=255) gTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATGTAGCTGCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCAc > 2:1871788/1‑150 (MQ=255) gTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCggg > 2:2028682/1‑142 (MQ=255) gTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCggg < 1:2028682/142‑1 (MQ=255) tCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACg > 2:1311346/1‑150 (MQ=255) cAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGt > 2:1587645/1‑150 (MQ=255) aaaTACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGTa < 2:1569847/150‑1 (MQ=255) aaaTACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGCGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGTa > 2:661693/1‑150 (MQ=255) aTACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAagag < 2:115870/129‑1 (MQ=255) aTACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAagag > 1:115870/1‑129 (MQ=255) gCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAgg < 1:1086052/82‑1 (MQ=255) gCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAgg > 2:1086052/1‑82 (MQ=255) gCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAagag < 2:1162560/125‑1 (MQ=255) gCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAagag > 1:1162560/1‑125 (MQ=255) cTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTg < 1:915960/95‑1 (MQ=255) cTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTg > 2:915960/1‑95 (MQ=255) cTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAagag > 2:2049354/1‑123 (MQ=255) cTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAagag < 1:2049354/123‑1 (MQ=255) ttCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAAt < 2:1744692/42‑1 (MQ=255) ttCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAAt > 1:1744692/1‑42 (MQ=255) ttCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGTAGCCATCTAc > 2:465878/1‑150 (MQ=255) aaCGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGaa < 2:532885/86‑1 (MQ=255) aaCGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGaa > 1:532885/1‑86 (MQ=255) tcgacgTCGGCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGt < 2:1787924/66‑1 (MQ=255) tcgacgTCGGCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGt > 1:1787924/2‑67 (MQ=255) tcgacgTCGGCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGTAGCCATCTACCTgg > 1:198037/2‑150 (MQ=255) tcgacgTCGGCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGTAGCCATCTACCTgg > 2:1616885/2‑150 (MQ=255) tcgacgTCGGCGACATCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGTAGCCATCTACCTgg > 2:2342936/2‑150 (MQ=255) acgacgTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGAtcttct < 1:726404/105‑1 (MQ=255) acgacgTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGAtcttct > 2:726404/1‑105 (MQ=255) acgacgTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGTAGCCATCTACCTgg < 2:992526/150‑1 (MQ=255) cgTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGTAGCCATCTACCTGGGTaa < 1:1587645/150‑1 (MQ=255) gTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACggg < 1:145887/54‑1 (MQ=255) gTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACggg > 2:145887/1‑54 (MQ=255) gCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGt < 1:1783918/69‑1 (MQ=255) gCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGt > 2:1783918/1‑69 (MQ=255) gCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGTAGCCATCTACCTGGGTAACGAc < 2:794179/150‑1 (MQ=255) gCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGAGATCGGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGTAGCCATCTACCTGGGTAACGAc > 1:151680/1‑150 (MQ=255) | AATGTCGCCGCCATGTCGCCTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTAAATGTGCTCGGTACTCCTTATGTTTGGGGCGGCAGCAGCCCGAAAAAAGGCTTTGACTGCAGCGGGCTGGTCAAATACGCCTTCAACGACGTCGCCGACGTCGACCTGCCGCGCACCTCCAATGCCATGGCCCGGGGCCACGGGGTGAAGGTGGCCAAGGGTGATCTGAAGCCTGGCGACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGTAGCCATCTACCTGGGTAACGAC > NC_002947/5816439‑5816735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |