| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,828,010 | C→G | 6.1% | intergenic (+156/+43) | mtgA → / ← rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,828,010 | 0 | C | G | 6.1% | 475.5 / 15.6 | 147 | intergenic (+156/+43) | mtgA/rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 |
| Reads supporting (aligned to +/- strand): ref base C (71/66); new base G (3/6); total (75/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.50e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
CGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGG > NC_002947/5827864‑5828156 | aggcccTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCAcc > 2:1656054/2‑150 (MQ=255) ccTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCTACCGCATCCCCTGTAGAACAG‑GGCCAAGGCGCTAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCAt > 1:2342885/1‑150 (MQ=255) cTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATa < 2:282339/150‑1 (MQ=255) cTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATa < 2:2167900/150‑1 (MQ=255) cTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGAAGGAGCG‑GGCTTACCCGCAAAGAGGCCGGGAAAGCCAAACAAAAAAGACGCTCACCCCATa > 2:1898190/1‑150 (MQ=255) cTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCACTGCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATa < 2:675077/150‑1 (MQ=255) ggTAAACCCGCTCCTACGGGAAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGc < 2:1493336/150‑1 (MQ=255) gTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGCAGCG‑GGCTTACCCGCGAAGAGGCCGGCACAGCCAAACAAAAAAGCCGCTCACCCCCTAGGGCCcgcg > 1:2188120/1‑150 (MQ=255) cccGCTCGTACGGCCAACCGCATACCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGAAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGTCGGCAAAGCCAAACATAAAAGCCGCTGGCCCTATGGGGTGAGCGGCttt < 2:896741/150‑1 (MQ=255) cccGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCttt > 2:2377660/1‑150 (MQ=255) ccGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCtttt > 2:1001304/1‑150 (MQ=255) ccGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCtttt > 2:1655911/1‑150 (MQ=255) cTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCtt < 1:1655911/150‑1 (MQ=255) cTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCtt < 1:2377660/150‑1 (MQ=255) tgcTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCttt < 2:1127452/148‑1 (MQ=255) ccTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAGAAAAGCCGCTGGCCCTATGGGGTGAGCGGCttttttgtt < 1:1921830/150‑6 (MQ=37) ccTACGGGCAACCGAATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTa < 1:288035/150‑1 (MQ=255) cTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCT‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTGGCCCTATGGGGTGAGCGGCttttttgttt < 1:291552/150‑7 (MQ=37) cTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTGGCCCTATGGGGTGAGCGGCttttttgttt < 1:1668253/150‑7 (MQ=38) gggCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAAcc > 2:1020773/1‑150 (MQ=255) ggCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTGCAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAAccc < 1:214422/150‑1 (MQ=255) gCAACCGCATCCCCGGCCTCCTCGCGGGCCAAACACCGGCTGGCCATAACCTCAGCCCCTGTAGGAGCG‑GGAAACCTCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCa < 1:1739473/150‑1 (MQ=255) gCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCa > 2:1176032/1‑150 (MQ=255) gCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCACCCCCAGCCGGAGAGCCACCTGAAC‑CGAATAGGCCGGCTGAGTCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCa < 1:1497440/150‑1 (MQ=255) aaCCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGa > 2:1567176/1‑150 (MQ=255) gtCCGCGGCGTCCGCGCGGGCGAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAAt < 2:2188120/149‑1 (MQ=255) aTCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAAt < 2:101295/150‑1 (MQ=255) tCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAAAAGCATCACCTCCACGCGCG‑CCATCACCAGGGAACCCACCTGCAATGTCTAAGAAAAAAGCCGCTCACCCCAGAGGTCCAGCGGCTTTTCTTTACAACCCAGACTCAATc < 2:2079817/150‑1 (MQ=255) cGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGc > 1:481378/1‑150 (MQ=255) ctcctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTc > 1:945388/1‑122 (MQ=255) tcctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGa > 1:2058368/1‑150 (MQ=255) tcctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGa < 2:1750805/150‑1 (MQ=255) tcctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGa > 1:340725/1‑150 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATa > 1:945998/1‑102 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATa < 2:945998/102‑1 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCaa < 2:163958/136‑1 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCaa > 1:163958/1‑136 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCa > 1:1552695/1‑150 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCa < 2:758360/150‑1 (MQ=255) cgGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTg < 1:1015968/150‑1 (MQ=255) aaCCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAgg > 2:2237229/1‑95 (MQ=255) aaCCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAgg < 1:2237229/95‑1 (MQ=255) ccGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTa < 1:1452693/110‑1 (MQ=255) ccGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTa > 2:1452693/1‑110 (MQ=255) ccGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCt > 1:1507857/1‑150 (MQ=255) cgcCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGt < 1:1001304/150‑1 (MQ=255) ccTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTc > 1:1240782/1‑150 (MQ=255) ccTACAGGCAACCGCAGCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTc < 2:2341995/150‑1 (MQ=255) aCAGGCAACCGCATCCGCTGTAGGAGCG‑TGCTTGCCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATc < 1:2054126/150‑1 (MQ=255) aCAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATc > 1:369912/1‑150 (MQ=255) aGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAACCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCGAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGc > 2:1737653/1‑150 (MQ=255) gCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCAt > 1:641149/1‑150 (MQ=255) gCAACAGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCCAAGCCAAACAAAACAGCCGCTCACCCCACAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGCGCCTTGATCTTGTTCATCGcct > 2:95102/1‑148 (MQ=255) cAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCAtt < 1:1638764/150‑1 (MQ=255) aaCCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCAttc < 1:95102/150‑1 (MQ=255) aaCCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAAACCAGACTCAATCAGGCAGAGACCAGTGCCTTGACCTTGTTCACCGCCttc > 1:1704380/1‑150 (MQ=255) cgaaTCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAGGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCAttcttc > 1:398706/4‑150 (MQ=255) gCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCTGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCt < 1:119048/132‑1 (MQ=255) gCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCTGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCt > 2:119048/1‑132 (MQ=255) gCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATtcttct < 2:2380858/150‑1 (MQ=255) gCATCCCCTGAAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCACTCAGGCAGCGATCAGTGCCTTGACCTGGTTCATCGCATtcttct < 2:216278/150‑1 (MQ=255) ccccTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCACCGGCGGCCGGCCCCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCaa < 2:1268904/150‑1 (MQ=255) ccTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTa < 1:1389048/86‑1 (MQ=255) ccTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTtctc < 2:69047/145‑1 (MQ=255) ccTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACt > 1:319262/1‑150 (MQ=255) cTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTg > 2:2276985/1‑150 (MQ=255) gTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTGGCCCTATGGGGTGAGCGGCtttt < 2:604601/78‑1 (MQ=18) gTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTGGCCCTATGGGGTGAGCGGCtttt > 1:604601/1‑78 (MQ=18) gAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAAt > 1:1067328/1‑150 (MQ=255) ggCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCt > 1:1661503/1‑150 (MQ=255) gtttACCCGCGAAAGGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCt < 2:404833/147‑1 (MQ=255) ttACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCt > 2:669679/1‑105 (MQ=255) ttACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCt < 1:669679/105‑1 (MQ=255) ccGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGa > 1:2173398/1‑150 (MQ=255) gagGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTg < 1:1176032/150‑1 (MQ=255) cGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTAc > 2:712170/1‑148 (MQ=255) cGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTAc < 1:712170/148‑1 (MQ=255) cGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACtt < 1:2276985/150‑1 (MQ=255) cGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACtt < 1:107488/150‑1 (MQ=255) ggCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTg > 2:1296866/1‑150 (MQ=255) cAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTc > 1:610355/1‑150 (MQ=255) cAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTc < 2:369912/150‑1 (MQ=255) aaaGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCt > 1:729936/1‑150 (MQ=255) aGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGc > 2:1104481/1‑150 (MQ=255) gCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATc < 1:433262/64‑1 (MQ=255) gCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGa > 1:1617152/1‑85 (MQ=255) gCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGa < 2:1617152/85‑1 (MQ=255) ccAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGt > 2:2206258/1‑90 (MQ=255) ccAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCAATACGCTGTACTTGTCTGCCa > 2:858074/1‑150 (MQ=255) caaacaaaAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACtt > 2:2266073/1‑141 (MQ=255) aaacaaaAAAGCCTCTCACCCCAGGTGGCCAGCGGCTATTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGGATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGt > 2:762370/1‑150 (MQ=255) aaacaaaAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGc > 2:574048/1‑112 (MQ=255) aaacaaaAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGt > 1:2127879/1‑150 (MQ=255) aaacaaaAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGt > 1:1020321/1‑150 (MQ=255) aaaaaGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATg < 2:1067328/150‑1 (MQ=255) aaaaGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGc > 1:144774/1‑150 (MQ=255) aaaGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCa > 1:1927530/1‑150 (MQ=255) gCCGCTAACCCCATGGGGCCATCGGTTTTGCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCg > 2:1956215/1‑150 (MQ=255) ccGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTAATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGt < 2:2058368/150‑1 (MQ=255) gCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATa < 1:2235425/117‑1 (MQ=255) | CGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGG > NC_002947/5827864‑5828156 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |