| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,828,015 | C→T | 5.9% | intergenic (+161/+38) | mtgA → / ← rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,828,015 | 0 | C | T | 5.9% | 468.7 / 12.8 | 153 | intergenic (+161/+38) | mtgA/rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 |
| Reads supporting (aligned to +/- strand): ref base C (74/70); new base T (3/6); total (77/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.97e-01 | |||||||||||
Only 100 of 158 total aligned reads displayed.
CCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTTCT > NC_002947/5827868‑5828162 | ccTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCTACCGCATCCCCTGTAGAACAGGGCCAAGGCGCTAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCAt > 1:2342885/1‑150 (MQ=255) cTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATa < 2:2167900/150‑1 (MQ=255) cTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATa < 2:282339/150‑1 (MQ=255) cTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGAAGGAGCGGGCTTACCCGCAAAGAGGCCGGGAAAGCCAAACAAAAAAGACGCTCACCCCATa > 2:1898190/1‑150 (MQ=255) cTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCACTGCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATa < 2:675077/150‑1 (MQ=255) cgcgGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGc < 1:36483/150‑1 (MQ=255) gggTAAACCCGCTCCTACGGGAAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAg > 1:1493336/1‑150 (MQ=255) ggTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGc > 2:1015968/1‑150 (MQ=255) ggTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCACCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGAGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGc < 2:764866/150‑1 (MQ=255) ggTAAACCCGCTCCTACGGGAAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGc < 2:1493336/150‑1 (MQ=255) cccGCTCGTACGGCCAACCGCATACCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGAAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGTCGGCAAAGCCAAACATAAAAGCCGCTGGCCCTATGGGGTGAGCGGCttt < 2:896741/150‑1 (MQ=255) cccGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCttt > 1:1439981/1‑150 (MQ=255) ccGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCtttt > 2:1001304/1‑150 (MQ=255) ccGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCtttt > 2:1655911/1‑150 (MQ=255) gCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTGGCCCTATGGGGTGAGCGGCtttttt > 2:1668253/1‑148 (MQ=39) ccTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAGAAAAGCCGCTGGCCCTATGGGGTGAGCGGCttttttgtt < 1:1921830/150‑6 (MQ=37) ccTACGGGCAACCGAATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTa < 1:288035/150‑1 (MQ=255) cTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAGAAAAGCCGCTGGCCCTATGGGGTGAGCGGCttttttgttt < 1:1517162/150‑7 (MQ=37) aCGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACaa > 2:11468/1‑150 (MQ=255) gggCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAAcc > 2:1020773/1‑150 (MQ=255) gCAACCGCATCCCCGGCCTCCTCGCGGGCCAAACACCGGCTGGCCATAACCTCAGCCCCTGTAGGAGCGGGAAACCTCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCa < 1:1739473/150‑1 (MQ=255) ccGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGTCGACCTCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACt > 2:2269360/1‑150 (MQ=255) gtCCGCGGCGTCCGCGCGGGCGAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAAt < 2:2188120/149‑1 (MQ=255) tCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATc < 2:2344992/150‑1 (MQ=255) ccGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCAGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAgg > 1:758360/1‑150 (MQ=255) cGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGc > 1:481378/1‑150 (MQ=255) ctcctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTc < 2:945388/122‑1 (MQ=255) tcctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAgg < 1:29562/144‑1 (MQ=255) tcctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGa > 1:2058368/1‑150 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATa > 1:945998/1‑102 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCaa > 1:163958/1‑136 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCa < 2:758360/150‑1 (MQ=255) cgGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTg < 1:1015968/150‑1 (MQ=255) cgGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTg < 1:1020773/150‑1 (MQ=255) aaCCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAgg > 2:2237229/1‑95 (MQ=255) ccGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTa > 2:1452693/1‑110 (MQ=255) ccGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTa < 1:1452693/110‑1 (MQ=255) ccGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCt > 1:1507857/1‑150 (MQ=255) cgcCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGt < 1:1001304/150‑1 (MQ=255) aCAGGCAACCGCATCCGCTGTAGGAGCGTGCTTGCCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATc < 1:2054126/150‑1 (MQ=255) cAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGACGAGCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCg > 2:2131660/1‑150 (MQ=255) aGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAACCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCGAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGc > 2:1737653/1‑150 (MQ=255) gCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCAt > 1:641149/1‑150 (MQ=255) gCAACAGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCCAAGCCAAACAAAACAGCCGCTCACCCCACAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGCGCCTTGATCTTGTTCATCGcct > 2:95102/1‑148 (MQ=255) cAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCAtt < 1:1638764/150‑1 (MQ=255) cgaaTCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAGGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCAttcttc > 1:398706/4‑150 (MQ=255) gCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCTGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCt > 2:119048/1‑132 (MQ=255) gCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATtcttct < 2:2380858/150‑1 (MQ=255) cATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCAttcttc > 2:2037523/1‑148 (MQ=255) cccTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAAc < 1:11468/150‑1 (MQ=255) cccTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAAc < 2:641149/150‑1 (MQ=255) ccTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTa < 1:1389048/86‑1 (MQ=255) ccTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTa > 2:1389048/1‑86 (MQ=255) ccTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTtctc > 1:69047/1‑145 (MQ=255) ccTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACt > 1:319262/1‑150 (MQ=255) cTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTg > 2:107488/1‑150 (MQ=255) cTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTg > 2:2276985/1‑150 (MQ=255) gTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGc < 1:1656054/150‑1 (MQ=255) gAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAAt > 1:1067328/1‑150 (MQ=255) ggCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCt > 1:1661503/1‑150 (MQ=255) gtttACCCGCGAAAGGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCt < 2:404833/147‑1 (MQ=255) gtttACCCGCGAAAGGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCt > 1:404833/3‑149 (MQ=255) ccGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGaa > 2:1631884/1‑137 (MQ=255) ccGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGa > 1:2173398/1‑150 (MQ=255) aaGAGGCCGGCAAAGCCAAAAAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGc < 1:2170254/150‑1 (MQ=255) gagGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTg < 1:1176032/150‑1 (MQ=255) ggCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTa < 1:1228511/150‑1 (MQ=255) cGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTAc < 1:712170/148‑1 (MQ=255) cGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTAc > 2:712170/1‑148 (MQ=255) ggCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTg > 2:1296866/1‑150 (MQ=255) gCAAAGCCAAACAAAAAAGCCTCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGACTACGCCCAGCCGCTACGCTGTACTTGt < 2:1240782/150‑1 (MQ=255) cAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTc > 1:610355/1‑150 (MQ=255) cAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTc < 2:369912/150‑1 (MQ=255) aaaGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCt > 1:729936/1‑150 (MQ=255) aGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGc > 2:1104481/1‑150 (MQ=255) gCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGa > 1:1617152/1‑85 (MQ=255) gCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGa < 2:1617152/85‑1 (MQ=255) ccAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGt < 1:2206258/90‑1 (MQ=255) ccAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGt > 2:2206258/1‑90 (MQ=255) ccAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCa > 1:2399558/1‑150 (MQ=255) ccAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCa > 1:978828/1‑150 (MQ=255) caaacaaaAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACtt < 1:2266073/141‑1 (MQ=255) aaacaaaAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGc > 2:574048/1‑112 (MQ=255) aaacaaaAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGc < 1:574048/112‑1 (MQ=255) aaacaaaAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGt > 1:2127879/1‑150 (MQ=255) aaacaaaAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGt > 2:177312/1‑150 (MQ=255) aaaGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTCCCACCCAGACTCAATCAGCCAGCGACAAGTGCCTTAACCTTGTTCATCGCATTCTTCTCCAACTGCCGAATAAGCTCCGCCGCTACGCTCTACTTGTATGCCAGTTCATGcc > 2:680052/1‑149 (MQ=255) aaaGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCa > 1:1927530/1‑150 (MQ=255) ccGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTAATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGt < 2:2058368/150‑1 (MQ=255) gCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATa < 1:2235425/117‑1 (MQ=255) gCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTgg > 1:1690247/1‑150 (MQ=255) aCCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGt < 2:2237929/58‑1 (MQ=255) aCCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGt > 1:2237929/1‑58 (MQ=255) aCCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGc < 2:728453/103‑1 (MQ=255) aCCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCtt > 2:2134604/1‑150 (MQ=255) aCCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCtt < 2:1555475/150‑1 (MQ=255) ccccATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTGCGTCGCATTCTTGTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCGtc > 1:171860/1‑150 (MQ=255) cccATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTtct > 2:836281/1‑150 (MQ=255) ccATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGGTACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTtc < 2:622961/148‑1 (MQ=255) ccATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGGTACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTtc > 1:622961/1‑148 (MQ=255) | CCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTTCT > NC_002947/5827868‑5828162 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |