| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,828,018 | A→G | 6.8% | intergenic (+164/+35) | mtgA → / ← rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,828,018 | 0 | A | G | 6.8% | 459.2 / 13.3 | 153 | intergenic (+164/+35) | mtgA/rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 |
| Reads supporting (aligned to +/- strand): ref base A (72/70); new base G (5/6); total (77/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 160 total aligned reads displayed.
CTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTTCTCTTCC > NC_002947/5827869‑5828167 | cgcgGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGc < 1:36483/150‑1 (MQ=255) ggTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGc > 2:1015968/1‑150 (MQ=255) ggTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCACCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGAGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGc < 2:764866/150‑1 (MQ=255) ggTAAACCCGCTCCTACGGGAAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGc < 2:1493336/150‑1 (MQ=255) gTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGCAGCG‑GGCTTACCCGCGAAGAGGCCGGCACAGCCAAACAAAAAAGCCGCTCACCCCCTAGGGCCcgcg > 1:2188120/1‑150 (MQ=255) cccGCTCGTACGGCCAACCGCATACCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGAAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGTCGGCAAAGCCAAACATAAAAGCCGCTGGCCCTATGGGGTGAGCGGCttt < 2:896741/150‑1 (MQ=255) cccGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCttt > 2:2377660/1‑150 (MQ=255) cccGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCttt > 1:1439981/1‑150 (MQ=255) gCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTGGCCCTATGGGGTGAGCGGCtttttt > 2:1668253/1‑148 (MQ=39) cTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCtt < 1:1655911/150‑1 (MQ=255) tgcTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCttt < 2:1127452/148‑1 (MQ=255) ccTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAGAAAAGCCGCTGGCCCTATGGGGTGAGCGGCttttttgtt < 1:1921830/150‑6 (MQ=37) ccTACGGGCAACCGAATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTa < 1:288035/150‑1 (MQ=255) cTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTGGCCCTATGGGGTGAGCGGCttttttgttt < 1:1668253/150‑7 (MQ=38) ggCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTGCAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAAccc < 1:214422/150‑1 (MQ=255) gCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCa > 2:1176032/1‑150 (MQ=255) gCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCACCCCCAGCCGGAGAGCCACCTGAAC‑CGAATAGGCCGGCTGAGTCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCa < 1:1497440/150‑1 (MQ=255) aaCCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGa > 2:1567176/1‑150 (MQ=255) gtCCGCGGCGTCCGCGCGGGCGAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAAt < 2:2188120/149‑1 (MQ=255) aTCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAAt < 2:101295/150‑1 (MQ=255) tCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAAAAGCATCACCTCCACGCGCG‑CCATCACCAGGGAACCCACCTGCAATGTCTAAGAAAAAAGCCGCTCACCCCAGAGGTCCAGCGGCTTTTCTTTACAACCCAGACTCAATc < 2:2079817/150‑1 (MQ=255) cGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGc > 1:481378/1‑150 (MQ=255) cctcctCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGc < 1:624525/150‑1 (MQ=255) ctcctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTc < 2:945388/122‑1 (MQ=255) ctcctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTc > 1:945388/1‑122 (MQ=255) tcctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAgg < 1:29562/144‑1 (MQ=255) tcctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAgg > 2:29562/1‑144 (MQ=255) tcctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGa < 2:1750805/150‑1 (MQ=255) tcctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGa > 1:340725/1‑150 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATa > 1:945998/1‑102 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCaa < 2:163958/136‑1 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCa < 2:758360/150‑1 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCa > 1:1552695/1‑150 (MQ=255) cgGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTg < 1:1015968/150‑1 (MQ=255) cgGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTg < 1:1020773/150‑1 (MQ=255) aaCCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAgg > 2:2237229/1‑95 (MQ=255) aaCCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAgg < 1:2237229/95‑1 (MQ=255) ccGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTa < 1:1452693/110‑1 (MQ=255) ccGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCt > 1:1507857/1‑150 (MQ=255) cgcCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGt < 1:1001304/150‑1 (MQ=255) cgcCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGt < 2:1552695/150‑1 (MQ=255) ccTACAGGCAACCGCAGCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTc < 2:2341995/150‑1 (MQ=255) aCAGGCAACCGCATCCGCTGTAGGAGCG‑TGCTTGCCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATc < 1:2054126/150‑1 (MQ=255) cAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGACGAGCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCg > 2:2131660/1‑150 (MQ=255) gCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCAt > 1:641149/1‑150 (MQ=255) gCAACAGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCCAAGCCAAACAAAACAGCCGCTCACCCCACAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGCGCCTTGATCTTGTTCATCGcct > 2:95102/1‑148 (MQ=255) cAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCAtt < 1:1638764/150‑1 (MQ=255) cgaaTCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAGGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCAttcttc > 1:398706/4‑150 (MQ=255) gCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCTGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCt > 2:119048/1‑132 (MQ=255) gCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCTGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCt < 1:119048/132‑1 (MQ=255) gCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATtcttct < 2:2380858/150‑1 (MQ=255) gCATCCCCTGAAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCACTCAGGCAGCGATCAGTGCCTTGACCTGGTTCATCGCATtcttct < 2:216278/150‑1 (MQ=255) cATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCAttcttc < 1:2037523/148‑1 (MQ=255) ccccTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCACCGGCGGCCGGCCCCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCaa < 2:1268904/150‑1 (MQ=255) cccTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAAc < 1:11468/150‑1 (MQ=255) ccTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTa < 1:1389048/86‑1 (MQ=255) ccTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTtctc < 2:69047/145‑1 (MQ=255) ccTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTtctc > 1:69047/1‑145 (MQ=255) cTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTg > 2:107488/1‑150 (MQ=255) cTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTg > 2:2276985/1‑150 (MQ=255) gTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTGGCCCTATGGGGTGAGCGGCtttt > 1:604601/1‑78 (MQ=18) gTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTGGCCCTATGGGGTGAGCGGCtttt < 2:604601/78‑1 (MQ=18) gTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGc < 1:1656054/150‑1 (MQ=255) gTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGc < 1:1898190/150‑1 (MQ=255) gAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAAt > 1:1067328/1‑150 (MQ=255) gtttACCCGCGAAAGGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCt < 2:404833/147‑1 (MQ=255) gtttACCCGCGAAAGGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCt > 1:404833/3‑149 (MQ=255) ttACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCt > 2:669679/1‑105 (MQ=255) aaGAGGCCGGCAAAGCCAAAAAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGc < 1:2170254/150‑1 (MQ=255) ggCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTa < 1:1228511/150‑1 (MQ=255) cGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCCGGGAACGATTAGTGTTTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACtt > 1:2097442/1‑150 (MQ=255) cGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACtt < 1:2276985/150‑1 (MQ=255) ggCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTg > 2:1296866/1‑150 (MQ=255) cAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTc > 1:610355/1‑150 (MQ=255) aaaGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCt > 1:729936/1‑150 (MQ=255) gCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATc > 2:433262/1‑64 (MQ=255) gCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGa > 1:1617152/1‑85 (MQ=255) gCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGa < 2:1617152/85‑1 (MQ=255) ccAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGt < 1:2206258/90‑1 (MQ=255) ccAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCa > 1:2399558/1‑150 (MQ=255) ccAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCa > 1:978828/1‑150 (MQ=255) ccAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCa < 2:2173398/150‑1 (MQ=255) caaacaaaAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACtt > 2:2266073/1‑141 (MQ=255) caaacaaaAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACtt < 1:2266073/141‑1 (MQ=255) aaacaaaAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGt > 2:177312/1‑150 (MQ=255) aaaaaGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATg < 2:1067328/150‑1 (MQ=255) aaaGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTCCCACCCAGACTCAATCAGCCAGCGACAAGTGCCTTAACCTTGTTCATCGCATTCTTCTCCAACTGCCGAATAAGCTCCGCCGCTACGCTCTACTTGTATGCCAGTTCATGcc > 2:680052/1‑149 (MQ=255) gCCGCTAACCCCATGGGGCCATCGGTTTTGCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCg > 2:1956215/1‑150 (MQ=255) ccGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTAATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGt < 2:2058368/150‑1 (MQ=255) gCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATa > 2:2235425/1‑117 (MQ=255) gCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTgg > 1:1690247/1‑150 (MQ=255) aCCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGc > 1:728453/1‑103 (MQ=255) aCCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGc < 2:728453/103‑1 (MQ=255) aCCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCtt < 2:1439981/150‑1 (MQ=255) ccccATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTGCGTCGCATTCTTGTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCGtc > 1:171860/1‑150 (MQ=255) cccATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTtct < 2:1712074/150‑1 (MQ=255) cccATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTtct > 2:836281/1‑150 (MQ=255) ccATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGGTACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTtc < 2:622961/148‑1 (MQ=255) aTAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTTCTCtt < 2:2127879/150‑1 (MQ=255) tAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTTCTCTTc < 2:729936/150‑1 (MQ=255) | CTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCG‑GGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTTCTCTTCC > NC_002947/5827869‑5828167 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |