| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,846,033 | C→T | 10.3% | intergenic (+49/+42) | yfhL → / ← mutM | 4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,846,033 | 0 | C | T | 10.3% | 253.2 / 14.3 | 95 | intergenic (+49/+42) | yfhL/mutM | 4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase |
| Reads supporting (aligned to +/- strand): ref base C (44/41); new base T (5/5); total (49/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGCCACGCCCGTACACAAA > NC_002947/5845887‑5846182 | agGCCTGCCCGGTGGACTGCATCCCGCTGGATGAAGCGTAGCCGGAAACCTAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCATGCACCGTCCCTGTCGGAGCAGGCATGCCCGCTCTcac < 2:1954596/150‑1 (MQ=255) cTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGtt < 2:1404166/150‑1 (MQ=255) gCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTa < 2:1631048/150‑1 (MQ=255) cccGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGACACACTTCCGATGCCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAg < 2:64802/150‑1 (MQ=255) cccGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAg < 1:2367166/150‑1 (MQ=255) cccGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAg < 1:13940/150‑1 (MQ=255) acaCTGCATCCCGCTGGATGTAGCGCATTCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTTTCAAGGGCTGATCATTTCTCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCg < 2:1069903/148‑1 (MQ=255) cTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCtt < 1:57821/150‑1 (MQ=255) cTGCATCACGCTGGATGAAGCGCAGACGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCtt < 2:557015/150‑1 (MQ=255) tGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCcac < 2:2056434/133‑1 (MQ=255) tGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCcac > 1:2056434/1‑133 (MQ=255) tGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTc > 1:849560/1‑150 (MQ=255) cATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCaa > 2:1688493/1‑150 (MQ=255) aTCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAAc > 2:1150832/1‑150 (MQ=255) gCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGtt > 1:1848451/1‑150 (MQ=255) gATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCa > 2:2209548/1‑150 (MQ=255) aTGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTCTGAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAg < 1:25536/150‑1 (MQ=255) gcgcATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAAc > 1:133870/1‑150 (MQ=255) gcgcATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAAc > 1:2083994/1‑150 (MQ=255) gcATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGt < 2:418521/150‑1 (MQ=255) aTCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGttt > 1:139635/1‑150 (MQ=255) aTCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGttt < 2:1317922/150‑1 (MQ=255) aTCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGttt > 2:1324795/1‑150 (MQ=255) ggAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATc > 1:324961/1‑150 (MQ=255) aaCCGAAGAACAGCTGATGTCCAAGTATCGCCGGATCACTTGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCTCTGTGATAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACATGTTCGCAGCGAACGTTTCATCGtt < 2:467052/150‑1 (MQ=255) aaCCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGtt > 2:154139/1‑150 (MQ=255) gaagaaCAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCa < 1:1168043/150‑1 (MQ=255) aCAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAgg > 2:2161452/1‑118 (MQ=255) aCAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAgg < 1:2161452/118‑1 (MQ=255) cAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGGGAGCAGGCATGCCCGCTCTcaca > 2:182100/1‑95 (MQ=38) cAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGGGAGCAGGCATGCCCGCTCTcaca < 1:182100/95‑1 (MQ=38) aGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTgg > 1:1266721/1‑141 (MQ=255) aGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTgg < 2:1266721/141‑1 (MQ=255) cTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCa < 1:122690/150‑1 (MQ=255) cTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCa < 1:2362571/150‑1 (MQ=255) tGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTc > 2:2058819/1‑107 (MQ=255) tGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTc < 1:2058819/107‑1 (MQ=255) aTGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTa < 2:139635/150‑1 (MQ=255) ccAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGtt < 2:1423204/130‑1 (MQ=255) ccAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGtt > 1:1423204/1‑130 (MQ=255) ccAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACg > 2:1818799/1‑150 (MQ=255) cAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTa < 1:666768/89‑1 (MQ=255) cAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTa > 2:666768/1‑89 (MQ=255) cAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAg > 2:689634/1‑90 (MQ=255) cAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAg < 1:689634/90‑1 (MQ=255) cAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGc < 2:1031136/150‑1 (MQ=255) aaGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCt > 1:926014/1‑150 (MQ=255) aGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTc < 1:1688493/150‑1 (MQ=255) cGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCct < 1:145578/150‑1 (MQ=255) gCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCa < 2:172071/134‑1 (MQ=255) gCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCa > 1:172071/1‑134 (MQ=255) gCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCctc > 1:147001/1‑150 (MQ=255) ccGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCctct > 2:1865914/1‑150 (MQ=255) cGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTg < 2:1879898/150‑1 (MQ=255) gATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCggg < 1:1049060/128‑1 (MQ=255) gATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCggg > 2:1049060/1‑128 (MQ=255) gATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGcc > 1:836368/1‑150 (MQ=255) tCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCACCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGcccc > 1:251019/1‑150 (MQ=255) cACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGATCGGGCATGCCTGTTCCCACAGTTTAGGTTTCGCCTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCa < 1:1367219/150‑1 (MQ=255) ggCTGATCACTGCCATTCCTTGCCTCCGCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGTTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTc < 2:1159834/150‑1 (MQ=255) tCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCACCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCaa < 2:251019/150‑1 (MQ=255) aTTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTCCCCCAGCTTCACTTCGCGCAACt > 1:1456421/1‑150 (MQ=255) ttGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTc > 1:1616212/1‑150 (MQ=255) cccTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGt > 1:451909/1‑150 (MQ=255) ccTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTa < 1:1106265/102‑1 (MQ=255) ccTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTa > 2:1106265/1‑102 (MQ=255) cTGCACGGTCCCTGTGGGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCAt > 1:628592/1‑150 (MQ=255) cTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTc < 2:1361432/79‑1 (MQ=255) cTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTc > 1:1361432/1‑79 (MQ=255) cTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCAt > 1:2285146/1‑150 (MQ=255) cGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCtt < 2:926014/150‑1 (MQ=255) taaacTGTGGGAGCAGGCATGCCCGCTCTCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGc > 1:1393328/5‑150 (MQ=255) gTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTg > 1:1586132/1‑109 (MQ=255) gTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTg < 2:1586132/109‑1 (MQ=255) tCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCa < 2:1848451/150‑1 (MQ=255) tCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCa < 1:1865914/150‑1 (MQ=255) aaacTGTGGGAGCAGGCATGCCCGCTCTCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCa < 2:1393328/147‑1 (MQ=255) aacTGTGGGAGCAGGCATGCCCGCTCTCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGc > 2:401173/3‑114 (MQ=38) aacTGTGGGAGCAGGCATGCCCGCTCTCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGc < 1:401173/112‑1 (MQ=38) cTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTcgc > 1:21146/1‑122 (MQ=255) cTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTcgc < 2:21146/122‑1 (MQ=255) cTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACgg > 2:700838/1‑150 (MQ=255) tgtgGGAGCAGGCATGCCCGCTCTCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACt > 2:1672448/1‑117 (MQ=39) tgtgGGAGCAGGCATGCCCGCTCTCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACt < 1:1672448/117‑1 (MQ=39) tgtgGGAGCAGGCATGCCCGCTCTCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGc > 1:1259800/1‑150 (MQ=255) agagCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGcc > 1:1569106/1‑150 (MQ=255) agCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCg > 1:314250/1‑150 (MQ=255) ggCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGCCAc > 1:1950587/1‑150 (MQ=255) gCATGCCTGCTCCCACAGTTTAAGGTTCGCTTCAACAGGTTCGCAGCGAACGTTTCACCGTTGGCAGCGCGGGCCGTACACGCTCCCCCTCTGCCCCAGCTTCACTTCGCGCAACCCACTGCCGCATACCTTGCACGGCAGCCCGCCCCg > 2:799645/1‑150 (MQ=255) aTGCCTGCTCCCACAGTTTATGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGCCACGcc > 2:404417/1‑150 (MQ=255) ccTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGCCACGCCCGt > 1:745936/1‑150 (MQ=255) cTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTc > 2:878355/1‑79 (MQ=255) cTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTc < 1:878355/79‑1 (MQ=255) cTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGCCACGCCCGTa > 1:1649006/1‑150 (MQ=255) cTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGCCACGCCCGTa < 2:369159/150‑1 (MQ=255) tgttgccACCGTTTAGGTTTCGCTTCAACAGGTTGGCAGCGAACGTTTCATCGTTGGAAGCGCGGGCAGTACACGCTGGACCGCTTCCCTAGCTTCACGTCGCGCTACTCAGTGGCGCAAACATTGCACAGCAGCCCGCCACGCCCGTac > 2:1023588/6‑150 (MQ=255) ccACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGCTTCATCGTTGGCAGCGCGGGCAGGACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGCCACGCCCGTACACaaa > 1:371878/1‑150 (MQ=255) | AGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGCCACGCCCGTACACAAA > NC_002947/5845887‑5846182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |