| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,854,674 | A→C | 6.5% | E213A (GAG→GCG) | tcyP → | sodium/cystine symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,854,674 | 0 | A | C | 6.5% | 317.3 / 9.3 | 116 | E213A (GAG→GCG) | tcyP | sodium/cystine symporter |
| Reads supporting (aligned to +/- strand): ref base A (46/61); new base C (5/3); total (51/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 118 total aligned reads displayed.
CCGCAACTGCTGCTGTCGTTCATCCCCAGCAACCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTGGCCAGTTCCAACACGGAGGACATCCTCAAGCTGGGCAGCT > NC_002947/5854526‑5854823 | ccGCAACTGCTGCTGTCGTTCATCCCCAGCAACCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGagag > 2:1613797/1‑150 (MQ=255)ccGCAACTGCTGCTGTCGTTCATCCCCAGCAACCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAg > 2:71163/1‑150 (MQ=255)ccGCAACTGCTGCTGTCGTTCATCCCCAGCAACCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAg > 2:786666/1‑150 (MQ=255) cGCAACTGCTGCTGTCGTTCATCCCCAGCAACCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAgc > 1:1969984/1‑150 (MQ=255) cAACTGCTGCTGTCGTTCATCCCCAGCAACCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAgcgc < 1:410371/150‑1 (MQ=255) ctgctgctgTCGTTCATCCCCAGCAACCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGcc < 2:37681/150‑1 (MQ=255) gctgctgTCGTTCATCCCCAGCAACCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCt < 2:1247012/150‑1 (MQ=255) gctgctgTCGTTCATCCCCAGCAACCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCt > 1:1247012/1‑150 (MQ=255) tgTCGTTCATCCCCAGCAACCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCgg < 1:1918137/150‑1 (MQ=255) tgTCGTTCATCCCCAGCAACCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCgg > 1:343209/1‑150 (MQ=255) aTCCCCAGCAACCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGcc < 1:715672/135‑1 (MQ=255) aTCCCCAGCAACCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGcc > 2:715672/1‑135 (MQ=255) ccAGCAACCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACAccc < 1:399949/150‑1 (MQ=255) aaCCCGATAGGTGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAg > 2:1253060/1‑150 (MQ=255) aaCCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCa > 2:1886633/1‑149 (MQ=255) aaCCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCa < 1:1886633/149‑1 (MQ=255) aaCCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAg > 2:120732/1‑150 (MQ=255) cccGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGc < 2:2277205/150‑1 (MQ=255) cccGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGc > 2:1650448/1‑150 (MQ=255) ccGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGaca > 2:787627/1‑139 (MQ=255) ccGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACCCCCTGCAggtc > 2:1302919/1‑148 (MQ=255) ccGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGcc > 1:945908/1‑150 (MQ=255) ccGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGcc > 2:105390/1‑150 (MQ=255) cGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGCACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCt < 1:1156657/150‑1 (MQ=255) gATAGGCGACCTGGCGCGGGCCACGCCTACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTg > 1:328207/1‑150 (MQ=255) ggCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTa > 2:2327411/1‑150 (MQ=255) gCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTaa < 1:2030823/150‑1 (MQ=255) gCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTaa > 1:2402509/1‑150 (MQ=255) cTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATgcgc < 1:2174914/150‑1 (MQ=255) cTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATgcgc > 2:1184196/1‑150 (MQ=255) gcgGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGt < 2:292099/150‑1 (MQ=255) gcgGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGt < 1:2327411/150‑1 (MQ=255) gcgGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGt > 1:514668/1‑150 (MQ=255) gCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTGGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCgg < 2:1750816/150‑1 (MQ=255) gCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCgg < 1:1596343/150‑1 (MQ=255) gCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCgg < 2:2204146/150‑1 (MQ=255) gCCGACCTCGATCATCAGCGTGGTGACCTTTTCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACCACGCCGAGCAGGGCGCGTGGGCCCTGACGACCGTCGACACCCTGCAGGCCCGGCTAATGCGCCTCGTACGGGtata > 2:188985/1‑147 (MQ=255) cgcccTTGATCATCAGCGTGGTGATCTTTGCCGCGTTTGTCGGCCTGGCCGCGCCCCACTTGACCAAGGACGACGCCGAGCAGGGCGAGCGCGCCCTGTCGCCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGtga < 1:737890/147‑1 (MQ=255) cgcccTCGATCATCAGCGTGGTGAGCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGCGACGGGCGTGCGTGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGtga < 2:88581/147‑1 (MQ=255) aCCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGtgatg > 2:2267191/1‑150 (MQ=255) cTCGAGCATCAGCGTGTTGATCTTTCCCGTTTTCCTCGGCCTCGCCGCGCTCCACTTGATCAAGAACGACGCCGAGAAAGGCGAGCTCGCTCTGTCGGTCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGaa < 1:1613797/150‑1 (MQ=255) tCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGCGCTCGCCCttctc > 1:37321/1‑92 (MQ=255) tCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGCGCTCGCCCttctc < 2:37321/96‑5 (MQ=255) tCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAg < 1:2335906/114‑1 (MQ=255) tCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAg > 2:2335906/1‑114 (MQ=255) gATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCt > 1:1980976/1‑150 (MQ=255) atcatcAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTg > 1:2145780/1‑150 (MQ=255) tcaGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGAccc > 1:194427/1‑150 (MQ=255) aGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGACCGCGCCCTGTCGGCCATCGACAAACTAAGGGATCGGAGGAGTCGCCGTGTGCGGGTCGTGGGGAAGCTGAccccc > 1:2340782/1‑150 (MQ=255) gCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGtgat > 2:137665/1‑136 (MQ=255) gCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGtgat < 1:137665/136‑1 (MQ=255) tggtCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTGCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCCCCCCCGGTCGGCAATCGAGACCCTGAAGGACTGGGTAGTGAGCCTGTGGCGGGACGAGATCAACCTGACCCCCTAttccg > 2:190491/4‑146 (MQ=255) gATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGt > 2:2043421/1‑150 (MQ=255) aTCTTTGCCGTGTTCCTCGGCCTGACCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTc > 1:839837/1‑77 (MQ=255) aTCTTTGCCGTGTTCCTCGGCCTGACCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTc < 2:839837/77‑1 (MQ=255) tCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGc < 1:1454708/150‑1 (MQ=255) cTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCt < 2:2402509/150‑1 (MQ=255) tttGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTggg < 2:16591/100‑1 (MQ=255) tttGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTggg > 1:16591/1‑100 (MQ=255) tttGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAAt < 2:214075/104‑1 (MQ=255) tGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGc < 1:105390/150‑1 (MQ=255) ccGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGt < 2:328207/150‑1 (MQ=255) cGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGtt < 2:331702/150‑1 (MQ=255) cGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGtt < 1:1184196/150‑1 (MQ=255) tgtTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTtga < 2:122421/150‑1 (MQ=255) tgtTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTtga < 1:2267191/150‑1 (MQ=255) tgtTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTtga < 2:2252895/150‑1 (MQ=255) gtTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTtgat < 1:786666/150‑1 (MQ=255) gtTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTtgat < 1:1153840/150‑1 (MQ=255) ttCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGCCGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGt < 1:171882/104‑1 (MQ=255) ttCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGAGACTGTGTTAACCGGTGGAATGCGCCTGGTGAGGGTCGCGCTGCGGTGGACCCCCTATGGCGGGCT‑GGCGGtgatg > 1:2223412/1‑150 (MQ=255) ttCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGt > 2:171882/1‑104 (MQ=255) tCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTtgatga < 1:1513531/150‑1 (MQ=255) ccTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGAc < 1:120732/150‑1 (MQ=255) cTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAg > 1:1113134/1‑81 (MQ=255) cTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAg < 2:1113134/81‑1 (MQ=255) tCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCa < 1:188985/150‑1 (MQ=255) cGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCaa < 2:1969984/150‑1 (MQ=255) ggCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCgg < 1:1351689/102‑1 (MQ=255) cTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGTTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAagta < 2:343209/150‑1 (MQ=255) ggCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAagtagt < 1:1650448/150‑1 (MQ=255) cgcgCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTGGc > 1:144736/1‑150 (MQ=255) cACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTGGCCAGTTcc > 2:1143722/1‑150 (MQ=255) aCTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTg > 2:911739/1‑140 (MQ=255) aCTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTg < 1:911739/140‑1 (MQ=255) ttGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTGGCCAGTTCCAac < 1:2043421/150‑1 (MQ=255) aTCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑gg > 1:2140000/1‑115 (MQ=255) aTCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑gg < 2:2140000/115‑1 (MQ=255) cAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTGGCCAGTTCCAACACgga < 2:1980976/150‑1 (MQ=255) aaGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTGGCCAGTTCCAACACggag > 2:462393/1‑150 (MQ=255) gacgacGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTGGCCAGTTCCAACACGGAGGAc < 1:462393/150‑1 (MQ=255) gacgCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTGGCCAGTTCCAACACGGAGGACATc < 1:721093/150‑1 (MQ=255) cgCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTGGCCAGTTCCAACACGGAGGACATCCt < 1:243326/150‑1 (MQ=255) cgCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTGGCCAGTTCCAACACGGAGGACATCCt > 1:194340/1‑150 (MQ=255) cgacaGGGCGCGCTCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTGGCCAg < 2:366938/121‑1 (MQ=255) cgacaGGGCGCGCTCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTGGCCAGTTCCAACACGGAGGACATCCTCAAg > 1:772386/5‑150 (MQ=255) aGGGCGCGCTCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTgtgg > 1:684158/1‑59 (MQ=38) aGGGCGCGCTCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGTgg < 2:684158/62‑1 (MQ=38) gCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACTCCATATGGAGTGCTGGGCTTTGAAG‑TGTAAGCGCTTGTCAGTTCCAACACGGAGGACATCCTCAAGCTGGGCa < 1:1253060/150‑1 (MQ=255) aGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTGGCCAGTTCCAACACGGAGGACATCCTCAAGCTGGGCAGCt < 2:2145780/150‑1 (MQ=255) | CCGCAACTGCTGCTGTCGTTCATCCCCAGCAACCCGATAGGCGACCTGGCGCGGGCCAAGCCGACCTCGATCATCAGCGTGGTGATCTTTGCCGTGTTCCTCGGCCTGGCCGCGCTCCACTTGATCAAGGACGACGCCGAGAAGGGCGAGCGCGCCCTGTCGGCCATCGACACCCTGCAGGCCTGGGTAATGCGCCTGGTGCGGGTCGTGATGAAGCTGACCCCCTATGGCGTGCT‑GGCGTTGATGACCAAAGTAGTGGCCAGTTCCAACACGGAGGACATCCTCAAGCTGGGCAGCT > NC_002947/5854526‑5854823 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |