| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,999,432 | T→C | 7.5% | intergenic (‑231/‑90) | ycaC‑IV ← / → PP_5256 | putative hydrolase/cyclic nucleotide‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,999,432 | 0 | T | C | 7.5% | 314.6 / 10.4 | 106 | intergenic (‑231/‑90) | ycaC‑IV/PP_5256 | putative hydrolase/cyclic nucleotide‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (47/51); new base C (4/4); total (51/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
GTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTGCGCCTTGATCCTGCTC > NC_002947/5999288‑5999578 | gTAGATAGTGGTTTTTTTTTTTTTTGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCCTTCCCACAGGGATCGCACAAGATTCAAAACAAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGa > 2:1608969/1‑150 (MQ=255) tAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGaa < 1:1487647/150‑1 (MQ=255) aGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAg < 1:2047799/150‑1 (MQ=255) gaaaGTTGTTTTTGACTTTAGCGTTCTATTTTAGGGCCGATAGATTGGCGTTGGTTTTGCTGGCCTCGACGCCCGCACGCCCGTTCCCACAGGGATCGCAAAGGATTCAACAGCAGCGCTTTGCCTGTGGGAACCGGCAAGTC‑GCGAAgg < 2:574548/147‑1 (MQ=255) gATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAgg < 2:121065/150‑1 (MQ=255) aTAGTGGTTTTTGCCTTTATCTTTCTGTTTTAGGAACGATAGATTAGCGTTGGGTTTGCTGTCCTCTTCGCGGGCACGCCCGTTCCCACATGGATCGCATAAGATTCAAAACCAGCGTTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGg > 2:133963‑M2/1‑149 (MQ=255) tAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTTTGGGAACGGGCAAGTC‑GCGAAGGgg < 2:1615033‑M2/150‑3 (MQ=255) aGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGggc < 1:638441‑M2/150‑4 (MQ=255) aGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGggc > 2:1437630‑M2/1‑147 (MQ=255) aGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGggc < 1:544671‑M2/150‑4 (MQ=255) gTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGggcc < 1:1723190‑M2/150‑5 (MQ=255) gTGGTTTTTATCTTTAGCGCTCTGTTTTAGGAACGATAGTTTGGCGTTTTACCGACGGTCCTCTTCGCGGGCACGCCCGGTTCCACAGGGATTCCACAAGATTCAAAACCAGCCTTTTTCCTTTGGTAACGGTCAAGTC‑GCTAAGGGTcc > 2:340128/1‑150 (MQ=255) ttttCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGcaca < 1:340128/150‑1 (MQ=255) tttGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTCCATGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGcaca < 1:194115/150‑1 (MQ=255) tttGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGcaca < 2:275193/150‑1 (MQ=255) ttGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAg < 1:513116/150‑1 (MQ=255) gCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGc < 1:374035/150‑1 (MQ=255) cTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCtt < 2:1291147/150‑1 (MQ=255) cTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCtt > 2:36504/1‑150 (MQ=255) tttAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCCGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTg > 2:206729/1‑150 (MQ=255) tAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCa < 1:482240/150‑1 (MQ=255) ttCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCAAAGGGATCGCACAAGATTCAAAACCAACGCTTTACCTTTGGGAACTGGCAAGTC‑GCGAAGGGGCCACCACAGGCTTTCATtgcc > 2:879767/1‑150 (MQ=255) ttttAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTgcctgcct > 1:1288892/1‑150 (MQ=255) cGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCt > 1:2406582/1‑150 (MQ=255) gATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTg > 2:1938865/1‑150 (MQ=255) ttGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTAt > 1:2141047/1‑150 (MQ=255) ggCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATta < 2:544671/150‑1 (MQ=255) gTTAGTTTTGCTGGCCGCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATtacta < 2:1341799/150‑1 (MQ=255) gTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCca > 1:2164617/1‑150 (MQ=255) tttGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCcaca < 2:1302888/150‑1 (MQ=255) gCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGcc > 1:2328107/1‑150 (MQ=255) cTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccc < 1:1615033/150‑1 (MQ=255) tGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccct > 1:2287029/1‑150 (MQ=255) tGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccct > 1:365375/1‑150 (MQ=255) tGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGAAGCAAAACCAGCGATTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGggccagcaaaaccaacgccaatctatcgttcctaaaacagaacgctaaaagcaaaaacca < 2:527123‑M2/150‑61 (MQ=255) ggCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGggccagcaaaaccaacgccaatctatcgttcctaaaacagaacgctaaaggcaaaaaccac < 1:299645‑M2/150‑62 (MQ=255) gCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctcc > 2:383251/1‑150 (MQ=255) ccTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctccc < 1:2405495/150‑1 (MQ=255) ctctTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGggccagcacaaccaacgccaatctatcgttcctaaaacagaacgctaaaggcaaaaaccactat < 2:583051‑M2/150‑65 (MQ=255) ctctTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGggccagcaaaaccaacgccaatctatcgttcctaaaacagaacgctaaaggcaaaaaccactat < 2:618483‑M2/150‑65 (MQ=255) ctctTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctcccc > 1:1393049/1‑150 (MQ=255) ctctTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctcccc > 1:1147854/1‑150 (MQ=255) tctTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctcccct > 2:1630658/1‑150 (MQ=255) tctTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctcccct > 2:360247/1‑150 (MQ=255) tCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGggccagcaaaaccaacgccaatctatcgttcctaaaacagaacgctaaaggcaaaaaccactatctac > 1:618483‑M2/1‑82 (MQ=255) gCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCga < 1:383251/150‑1 (MQ=255) aCGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGCC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAAc < 2:1755209/109‑1 (MQ=255) gCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATtgc > 1:2074600/1‑94 (MQ=255) gCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATtgc < 2:2074600/94‑1 (MQ=255) ccGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCGTGCCCGCGAAGAggccagcaaaaccaacgccaatctatcgttcctaaaacagaacgctaaaggcaaaaac > 2:830112‑M2/1‑71 (MQ=255) ccGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCGTGCCCGCGAAGAggccagcaaaaccaacgccaatctatcgttcctaaaacagaacgctaaaggcaaaaac < 1:830112‑M2/129‑59 (MQ=255) cGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGggccagcaaaaccaacgccaatctatcgttcctaaaacagaacgctaaaggcaaaaaccactatctaccgctccaaaggtg < 2:1710807‑M2/150‑82 (MQ=255) ttCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCGTGCCCGCGAAGAggccagcaaaaccaacgccaatctatcgttc > 1:348349‑M2/1‑68 (MQ=255) ttCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCGTGCCCGCGAAGAggccagcaaaaccaacgccaatctatcgttc < 2:348349‑M2/99‑32 (MQ=255) ccACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCt > 2:2177836/1‑150 (MQ=255) ccACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCt > 1:504901/1‑150 (MQ=255) ccACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCt > 1:2389612/1‑150 (MQ=255) cacaGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCGTGCCCGCGAAGAggccagcaaaaccaacgccaatctatcgttc < 2:1097688‑M2/95‑32 (MQ=255) cacaGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCGTGCCCGCGAAGAggccagcaaaaccaacgccaatctatcgttc > 1:1097688‑M2/1‑64 (MQ=255) cacaGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATg < 2:2358031/147‑1 (MQ=255) cacaGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATg > 1:2358031/1‑147 (MQ=255) cacaGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTg < 2:2164617/150‑1 (MQ=255) cacaGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTg < 1:36504/150‑1 (MQ=255) cacaGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTg < 2:2406582/150‑1 (MQ=255) ggATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTg < 2:871834/96‑1 (MQ=255) ggATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTg > 1:871834/1‑96 (MQ=255) aTCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTTCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTcg < 2:1288892/150‑2 (MQ=255) cGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATc < 2:2389612/150‑1 (MQ=255) cGCACAAGATTCAAAACCAGCGCGTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATc < 1:879767/150‑1 (MQ=255) gCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATcc > 2:1976301/1‑150 (MQ=255) acaAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAg > 1:1425756/1‑150 (MQ=255) acaAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAg > 1:594930/1‑150 (MQ=255) caAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctcccc > 1:1122906/1‑114 (MQ=255) caAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctcccc < 2:1122906/114‑1 (MQ=255) aaGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCAcc < 2:1636368/130‑1 (MQ=255) aaGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCAcc > 1:1636368/1‑130 (MQ=255) ttCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATtgcctgcc < 2:841943/72‑1 (MQ=255) aaaCCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCgt > 1:2146728/1‑150 (MQ=255) aGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGggccagcacaaccaacgccaatctatcgttcctaaaacagaacgctaaaggcaaaaaccactatctaccgctccaaaggtggtggttttaatcttctcccatcaacgcgaaaca > 1:583051‑M2/1‑36 (MQ=255) aGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCgttgtta > 2:923741/1‑149 (MQ=255) aGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGttgttg > 1:1156084/1‑150 (MQ=255) tACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGtt < 1:206729/150‑1 (MQ=255) ccTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTgc < 1:1050531/150‑1 (MQ=255) cTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTgcg > 2:440482/1‑150 (MQ=255) tgtgGGAACGGGCAAGTC‑GCGAAGGggccagcaaaaccaacgccaatctatcgttcctaaaacagaacgctaaaggcaaaaaccactatctaccgctccaaaggtggtggttttaatcttctcccatcaacgcgaaacacccaacttact > 2:299645‑M2/1‑25 (MQ=255) tgtgGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGTCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGAACACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTgcgc < 2:638441/150‑1 (MQ=255) tgGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctccc < 1:2111694/86‑1 (MQ=255) tgGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctccc > 2:2111694/1‑86 (MQ=255) tgGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTTTTGCTGGTTTggggct > 1:177627/1‑145 (MQ=255) ggAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTGCGCCTTg < 2:2287029/150‑1 (MQ=255) gAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTGCGCCTTGa < 1:1608969/150‑1 (MQ=255) aaCGGGCAAGTC‑GCGAAGGggccagcaaaaccaacgccaatctatcgttcctaaaacagaacgctaaaggcaaaaaccactatctaccgctccaaaggtggtggttttaatcttctcccatcaacgcgaaacacccaacttactgaacat > 1:1710807‑M2/1‑19 (MQ=255) gggCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCgttgt < 2:1528294/128‑1 (MQ=255) gggCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCgttgt > 1:1528294/1‑128 (MQ=255) gggCAAGTC‑CCGAAGGGCCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTGCGCCTTGATCCt > 2:953363/1‑150 (MQ=255) tctaGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTGCGCCTTGATCCTGc < 1:1121663/147‑1 (MQ=255) gCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTGCGCCTTGATCCTGc < 1:1630658/150‑1 (MQ=255) aaGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTGCGCCTTGATCCTGCTc > 1:2256865/1‑150 (MQ=255) gTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATtactac < 1:1918683/60‑1 (MQ=255) gTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATtactac > 2:1918683/1‑60 (MQ=255) | GTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTC‑GCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTGCGCCTTGATCCTGCTC > NC_002947/5999288‑5999578 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |