| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,016,828 | A→G | 5.9% | intergenic (‑88/+139) | PP_5728 ← / ← PP_5267 | rhs repeat‑associated core domain‑containing protein/cytochrome c5 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,016,828 | 0 | A | G | 5.9% | 313.0 / 6.3 | 102 | intergenic (‑88/+139) | PP_5728/PP_5267 | rhs repeat‑associated core domain‑containing protein/cytochrome c5 |
| Reads supporting (aligned to +/- strand): ref base A (49/47); new base G (4/2); total (53/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.86e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
AGCTTTTGCGGCTGTGTTCGACCGGCTGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCC > NC_002947/6016679‑6016975 | aGCTTTTGCGGCTGTGTTCGACCGGCTGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCa > 1:452416/1‑150 (MQ=255) cTTTTGCGGCTGTGTTCGACCGGCTGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAgg > 2:908504/1‑150 (MQ=255) cTTTTGCGGCTGTGTTCGACCGGCTGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAgg < 1:706147/150‑1 (MQ=255) ttGCGGCTGTGTTAGACCGGCTGCATGTTGCTCGGGGCAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTc > 2:1482247/1‑150 (MQ=255) tGCGGCTGTGTTCGACCGGCTGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCa < 2:1588949/150‑1 (MQ=255) gCGGCTGTGTTCGACCGGCTGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAg < 2:1588880/144‑1 (MQ=255) gCGGCTGTGTTCGACCGGCTGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAg > 1:1588880/1‑144 (MQ=255) gCGGCTGTGTTCGACCGGCTGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAg < 1:908504/150‑1 (MQ=255) tgtTCGACCGGCTGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGAtt < 1:1722419/150‑1 (MQ=255) ttCGACCGGCTGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTgg > 2:1433568/1‑150 (MQ=255) ttCGACCGGCTGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATAAGAAGAGACACTTTGCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTATCATGGAATCAGG‑GTCAGCCGGATTgg > 1:769596/1‑150 (MQ=255) tCGACCGGCTGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCATTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGa < 1:967353/150‑1 (MQ=255) tCGACCGGCTGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGa < 1:1433568/150‑1 (MQ=255) cGGCTGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑ACAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTc < 2:2269555/150‑1 (MQ=255) tGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGga < 2:19354/150‑1 (MQ=255) gCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGgag < 1:316096/150‑1 (MQ=255) cATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGgaga > 2:499127/1‑150 (MQ=255) aTGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTATGgagag > 2:2351467/1‑149 (MQ=255) gggACAGTTATCGCCCAGATCCATTGTTAGCCACTGCTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGa < 1:2060340/150‑1 (MQ=255) ggACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGAc < 1:1040311/150‑1 (MQ=255) aCAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCACTAACACGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACAt > 1:1254108/1‑150 (MQ=255) ttATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACa > 1:1856075/1‑145 (MQ=255) ttATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACa < 2:1856075/145‑1 (MQ=255) tATCGCCCAGATCCATTGTTAGCCACCACTTCACTCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGctc < 1:499127/150‑1 (MQ=255) tCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTa < 2:1968233/150‑1 (MQ=255) gCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTg > 2:247261/1‑124 (MQ=255) gCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTg < 1:247261/124‑1 (MQ=255) gCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGc > 1:1188356/1‑150 (MQ=255) cccAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTg < 1:1548938/123‑1 (MQ=255) cccAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTg > 2:1548938/1‑123 (MQ=255) cAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTc > 1:352964/1‑102 (MQ=255) cAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTc < 2:352964/102‑1 (MQ=255) aTCCATTGTTAGCTACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGggttg > 2:2115324/1‑150 (MQ=255) aTCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGggttg < 2:452416/150‑1 (MQ=255) aTTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGga > 2:1638612/1‑116 (MQ=255) aTTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGga < 1:1638612/116‑1 (MQ=255) aTTGTTAGCCACCACTTCAATCAGAAGCGCCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCCTCGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGTAGACATCCATGGACATGGCTCTAGCGGgttggttg > 2:745431/1‑150 (MQ=255) ttGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGc > 1:649491/1‑150 (MQ=255) tGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGc < 1:2221611/138‑1 (MQ=255) tGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGc > 2:2221611/1‑138 (MQ=255) gCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGa < 2:1216581/121‑1 (MQ=255) gCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGa > 1:1216581/1‑121 (MQ=255) ccaccaCTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGc > 1:460146/1‑143 (MQ=255) ccaccaCTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGc < 2:460146/143‑1 (MQ=255) accacTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTg > 2:2030687/1‑104 (MQ=255) accacTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTg < 1:2030687/104‑1 (MQ=255) ttCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCtt > 2:1925027/1‑150 (MQ=255) ttCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGATGCCTGTGCTGGACCtt > 2:77830/1‑150 (MQ=255) aTCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTtctc > 2:1964159/1‑150 (MQ=255) aTCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTtctc < 1:2344794/150‑1 (MQ=255) cAGAAGCGTCAGTGTTCTTGAGAACCCTGAAAAATAGAACTGGTCAAACAAGCT‑G‑CCCAAACTTAGCAGGAGTTAGCCCGATTGGAGCTCCGTGAGACATCCATGGACATAGATCTAGTGGGTTTGTTGCCTGTGCTGGACCTTTCTCgg < 1:2351467/150‑1 (MQ=255) aGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACaaa > 1:2226906/1‑150 (MQ=255) gtgtTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACaaaa < 2:1188356/150‑1 (MQ=255) tgtTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACaaaaa > 1:2286233/1‑150 (MQ=255) cttcAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGggttg > 2:1795013/1‑109 (MQ=255) cttcAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGggttg < 1:1795013/109‑1 (MQ=255) tGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCAt < 2:954886/77‑1 (MQ=255) tGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCAt > 1:954886/1‑77 (MQ=255) tGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCgg > 1:1698683/1‑123 (MQ=255) tGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCgg < 2:1698683/123‑1 (MQ=255) tGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCa > 2:2120068/1‑150 (MQ=255) aaCTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCgg < 2:312366/113‑1 (MQ=255) aaCTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCgg > 1:312366/1‑113 (MQ=255) aaCTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGcc > 2:2286903/1‑150 (MQ=255) taat‑AAAAATGCTAGTCCGCATGGAATCAGG‑CTCAGCCCGATTGGAACGGCTAGAGACATCCATGGACATGGCTCTAGCGGATTGGTTGCCTGTGCTGTAGCTTTAAAAAAAAAAAAAAAAACAAAGCCCGCCATCAACGGCGGGCCTCa < 2:590708/147‑1 (MQ=255) tGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCtt < 1:995420/50‑1 (MQ=255) gT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGc < 2:525286/88‑1 (MQ=255) gT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGc > 1:525286/1‑88 (MQ=255) aaaaTGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCaa < 2:1254108/150‑1 (MQ=255) aaTGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAAtt < 1:1964159/150‑1 (MQ=255) tGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCa > 1:451843/1‑150 (MQ=255) tGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCACCATCAACGGCGGGCCTCATGCAATTCa > 1:415714/1‑150 (MQ=255) tAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAACCAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCt < 1:690367/150‑1 (MQ=255) tAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACaaa < 2:188908/114‑1 (MQ=255) tAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACaaa > 1:188908/1‑114 (MQ=255) tAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCt < 1:1482247/150‑1 (MQ=255) tcATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGc < 2:763837/78‑1 (MQ=255) tcATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGc > 1:763837/1‑78 (MQ=255) tcATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAg < 2:319306/109‑1 (MQ=255) tcATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCAt > 2:81150/1‑117 (MQ=255) tcATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCAt < 1:81150/117‑1 (MQ=255) gctccaaTCGGG‑CTGAGCCTGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGTGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATg < 1:1498132/128‑1 (MQ=255) gctccaaTCGGG‑CTGAGCCTGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATg > 2:1498132/6‑133 (MQ=255) cATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGggttggt < 1:139459/68‑1 (MQ=255) cATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGggttggt > 2:139459/1‑68 (MQ=255) aTGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCg > 2:875111/1‑111 (MQ=255) aTGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCg < 1:875111/111‑1 (MQ=255) aTGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATca < 1:77830/150‑1 (MQ=255) tccaaTCGGG‑CTGAGCCTGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAg > 2:539534/4‑106 (MQ=255) tccaaTCGGG‑CTGAGCCTGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAg < 1:539534/103‑1 (MQ=255) tcaaaTCGGG‑CTGAGCCTGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATcac > 1:2402345/4‑150 (MQ=255) tGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGc < 1:1774239/140‑1 (MQ=255) tGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATcac > 1:1723620/1‑150 (MQ=255) tGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATcac > 1:2041096/1‑150 (MQ=255) tGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATcac > 1:1470967/1‑150 (MQ=255) ggAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGccc > 2:754600/1‑108 (MQ=255) ggAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGccc < 1:754600/108‑1 (MQ=255) aaTCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAAc > 1:1689684/1‑150 (MQ=255) aTCGGG‑CTGAGCCTGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAAcc > 2:2294599/1‑150 (MQ=255) tCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAAccc > 1:2051016/1‑150 (MQ=255) | AGCTTTTGCGGCTGTGTTCGACCGGCTGCATGTTGCTCGGGACAGTTATCGCCCAGATCCATTGTTAGCCACCACTTCAATCAGAAGCGTCAGTGTTCTTCAGAACCCTGAAAAATAGAACTGGT‑AAAAATGCTAGTTCTCATGGAATCAGG‑CTCAGCCCGATTGGAGCTTCTGGAGACATCCATGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCC > NC_002947/6016679‑6016975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |